Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g11
(691 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 33 0.18
At4g27860.1 68417.m04000 integral membrane family protein contai... 32 0.41
At3g28770.1 68416.m03591 expressed protein 32 0.41
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 31 0.54
At1g56110.1 68414.m06443 nucleolar protein Nop56, putative simil... 31 0.54
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont... 31 0.95
At2g22795.1 68415.m02704 expressed protein 31 0.95
At5g60030.1 68418.m07527 expressed protein 30 1.3
At3g60190.1 68416.m06724 dynamin-like protein E (DL1E) nearly id... 30 1.3
At3g17920.1 68416.m02282 leucine-rich repeat family protein cont... 30 1.3
At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)... 30 1.3
At1g56660.1 68414.m06516 expressed protein 30 1.7
At3g13222.1 68416.m01655 expressed protein 29 2.2
At2g34710.1 68415.m04263 homeobox-leucine zipper transcription f... 29 2.2
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 2.2
At1g30490.1 68414.m03727 homeobox-leucine zipper transcription f... 29 2.2
At4g38540.1 68417.m05456 monooxygenase, putative (MO2) identical... 29 2.9
At2g18550.1 68415.m02161 homeobox-leucine zipper family protein ... 29 2.9
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 29 3.8
At2g13320.1 68415.m01468 expressed protein anf genefinder 29 3.8
At5g45190.1 68418.m05547 cyclin family protein similar to cyclin... 28 5.1
At3g59820.1 68416.m06675 calcium-binding mitochondrial protein-r... 28 5.1
At3g24720.1 68416.m03104 protein kinase family protein protein k... 28 5.1
At2g44590.3 68415.m05551 dynamin-like protein D (DL1D) identical... 28 5.1
At2g44590.2 68415.m05550 dynamin-like protein D (DL1D) identical... 28 5.1
At2g44590.1 68415.m05549 dynamin-like protein D (DL1D) identical... 28 5.1
At2g27120.1 68415.m03259 DNA-directed DNA polymerase epsilon cat... 28 5.1
At2g14240.1 68415.m01587 hypothetical protein and genefinder 28 5.1
At1g33680.1 68414.m04166 KH domain-containing protein similar to... 28 5.1
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 28 6.7
At5g54460.1 68418.m06782 wound-responsive protein-related contai... 28 6.7
At2g04970.1 68415.m00518 hypothetical protein similar to At2g152... 28 6.7
At5g58880.1 68418.m07377 hypothetical protein 27 8.9
At4g34400.1 68417.m04886 transcriptional factor B3 family protei... 27 8.9
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 27 8.9
At3g11590.1 68416.m01416 expressed protein 27 8.9
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 27 8.9
At1g49250.1 68414.m05522 ATP dependent DNA ligase family protein... 27 8.9
At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10) ide... 27 8.9
At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10) ide... 27 8.9
At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10) ide... 27 8.9
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 33.1 bits (72), Expect = 0.18
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +3
Query: 213 KDKPADFQFAKPSLLGL---DKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKH 383
K+K + KP G DK AK+K + EENE T+ +K+ + RK
Sbjct: 680 KEKEELSEMGKPVTKGKEKKDKKGKAKQKAEEIEVTGKEENE---TDKHGKMKKERKRKK 736
Query: 384 NEETPTYTGGISEQARERLIERMQKREKQVKEKGVHNSTQEEK 512
+E GG E+ ++ E +K K+ K + S EE+
Sbjct: 737 SESKK--EGGEGEETQKEANESTKKERKRKKSESKKQSDGEEE 777
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +3
Query: 282 KRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKR 461
KRK++ + E E + ++ KERK RK+ E E+ R+ +E +K
Sbjct: 762 KRKKSESKKQSDGEEETQKEPSESTKKERK-RKNPESKKKAEAVEEEETRKESVESTKKE 820
Query: 462 EKQVK----EKGVHNSTQEEKKTQAK 527
K+ K E+ V N T++ +K + K
Sbjct: 821 RKRKKPKHDEEEVPNETEKPEKKKKK 846
>At4g27860.1 68417.m04000 integral membrane family protein contains
Pfam PF01988: Integral membrane protein
Length = 611
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/71 (19%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 306 SFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKREKQV--KE 479
S ++ ++D+ N D ++ K N TP Y + + +++ + + Q +K+ +
Sbjct: 291 STDSKSHDDQAANTDQDFDKKTDNKRNRLTPIYPSSLEKPSKQTVNKETQNHDKEAADPD 350
Query: 480 KGVHNSTQEEK 512
+ V T+ +K
Sbjct: 351 QDVDKETENQK 361
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/87 (20%), Positives = 38/87 (43%)
Frame = +3
Query: 267 KLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIE 446
K + K+++ + + + E E + K+ + K +E+ + E +E
Sbjct: 1031 KKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDN 1090
Query: 447 RMQKREKQVKEKGVHNSTQEEKKTQAK 527
+ K+E+ KEK H ++ KK + K
Sbjct: 1091 KSMKKEEDKKEKKKHEESKSRKKEEDK 1117
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 285 RKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKR- 461
+ N+ +NE+ + + + ++K +K NEE S ++++ +++ +K+
Sbjct: 1126 QNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKS 1185
Query: 462 -EKQVKEKGVHNSTQEEKK 515
+ Q K+K EEKK
Sbjct: 1186 SKDQQKKKEKEMKESEEKK 1204
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 31.5 bits (68), Expect = 0.54
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +3
Query: 264 DKLAAAKRKQNRLISFQNEENE-----DEGTNVDNVVKERKYRKHNEETPTYTGG-ISEQ 425
+K K + N + EE + DE + V E K + EET + E+
Sbjct: 283 EKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVKEE 342
Query: 426 ARERLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
+ER +E +K +++VKE +EE+K + K
Sbjct: 343 GKER-VEEEEKEKEKVKEDDQKEKVEEEEKEKVK 375
>At1g56110.1 68414.m06443 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 522
Score = 31.5 bits (68), Expect = 0.54
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 312 QNEENEDEGTN-VDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKREKQVKEKGV 488
+N + E+EG VD VK+ K +K E + E E+ +K+EK+ E
Sbjct: 429 ENLKQEEEGKEPVDASVKKSKKKKAKGEEEEEVVAMEEDKSEK----KKKKEKRKMETAE 484
Query: 489 HNSTQEEKKTQ 521
N E+KKT+
Sbjct: 485 ENEKSEKKKTK 495
>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
contains Pfam domain PF00098: Zinc knuckle; identical to
cDNA CAX-interacting protein 4 GI:27651998
Length = 332
Score = 30.7 bits (66), Expect = 0.95
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +3
Query: 282 KRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKR 461
KR ++ S E+E+EG + KER+ RK +E+ SE +R ++R ++
Sbjct: 207 KRSSHKRRSLSESEDEEEGRSKRR--KERRGRKRDED----DSDESEDEDDRRVKRKSRK 260
Query: 462 EKQVKEKGVHNSTQEEKKT 518
EK+ + ++S + ++
Sbjct: 261 EKRRRRSRRNHSDDSDSES 279
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/82 (19%), Positives = 36/82 (43%)
Frame = +3
Query: 282 KRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKR 461
K K+N I + +++E + KE++ NE + +E++ E +K
Sbjct: 597 KEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENV--NTESEKKEQVEENEKKT 654
Query: 462 EKQVKEKGVHNSTQEEKKTQAK 527
++ E NS + ++ Q++
Sbjct: 655 DEDTSESSKENSVSDTEQKQSE 676
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +3
Query: 282 KRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKR 461
K K+N I + +++E + KE++ EET E+ E +++
Sbjct: 540 KDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEK 599
Query: 462 EKQVKEKGVHNSTQE--EKKTQAK 527
E + EK S +E EK+T+ K
Sbjct: 600 ENEKIEKEESASQEETKEKETETK 623
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +3
Query: 213 KDKPADFQFAKPSLLGLDKLAAAKRKQNRLISFQNEENE-DEGTNVDNVVK--ERKYRKH 383
KD+ + K L K A K ++ + N+E+ DE +++ K E K +K
Sbjct: 160 KDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKK 219
Query: 384 NEETPTYTGGISEQARERLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
N++ E+ + +K+EK+ K K EE+K++ K
Sbjct: 220 NKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKK 267
>At3g60190.1 68416.m06724 dynamin-like protein E (DL1E) nearly
identical to dynamin-like protein E [Arabidopsis
thaliana] GI:19423872; contains Pfam profiles PF01031:
Dynamin central region, PF00350: Dynamin family,
PF02212: Dynamin GTPase effector domain
Length = 624
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 285 RKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKRE 464
R Q+ + N D NVD ++ RK R++ + +P Y S+ E L + + K
Sbjct: 238 RLQHPWVGIVNRSQADINKNVDMMLARRKEREYFDTSPDYGHLASKMGSEYLAKLLSKHL 297
Query: 465 KQV 473
+ V
Sbjct: 298 ESV 300
>At3g17920.1 68416.m02282 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 962
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/97 (21%), Positives = 45/97 (46%)
Frame = +3
Query: 198 LIIRQKDKPADFQFAKPSLLGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYR 377
++ R+K +PA + F P+ D + RK+ ++ + ++E+E T V++ +++
Sbjct: 327 VVTRRKSQPASYGFYSPARDEADDEGSFTRKKTKIYRLASIDSEEESTYVNS---DQESA 383
Query: 378 KHNEETPTYTGGISEQARERLIERMQKREKQVKEKGV 488
ET + I + + K E+ KE+ V
Sbjct: 384 SCEPETQSKEENIKSDHEADVFGLICKVEQLKKERSV 420
>At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)
similar to RNA helicase GB:CAA09204 from [Arabidopsis
thaliana]; identical to cDNA DEAD box RNA helicase, RH13
GI:3776002
Length = 832
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/125 (21%), Positives = 54/125 (43%)
Frame = +3
Query: 141 DPEENVHRLEGTSGDTPGGLIIRQKDKPADFQFAKPSLLGLDKLAAAKRKQNRLISFQNE 320
D E+ L SG GG + ++ AD+ P++ + +RKQ+ E
Sbjct: 45 DEGESFSTLFSGSGQLDGGFLSLEEIDEADYHLTLPTI----ESEITERKQSP------E 94
Query: 321 ENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKREKQVKEKGVHNST 500
+++D VD +++ + + E E+ R++ +K+ K+ KEK
Sbjct: 95 DDDDTNETVDEMIEGEEAEEDGEGRDDEDDEDDEETRKK----KEKKAKRNKEKKKEKKK 150
Query: 501 QEEKK 515
+++KK
Sbjct: 151 KKQKK 155
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Frame = +3
Query: 261 LDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYT-------GGIS 419
++K+ A K +++ S +++E + +G NVD+ VKE K ++ + G +
Sbjct: 42 IEKVKAKKDEESSGKSKKDKEKK-KGKNVDSEVKEDKDDDKKKDGKMVSKKHEEGHGDLE 100
Query: 420 EQARERLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
+ + +E +K K+ KEK H +EEK+ + K
Sbjct: 101 VKESDVKVEEHEKEHKKGKEK-KHEELEEEKEGKKK 135
>At3g13222.1 68416.m01655 expressed protein
Length = 567
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 651 YFYPYLYCPHPYLASYLYPDSF 586
YF PY Y P PY+ YL P+ F
Sbjct: 399 YFPPY-YMPQPYIHQYLSPNGF 419
>At2g34710.1 68415.m04263 homeobox-leucine zipper transcription
factor (HB-14) identical to homeodomain transcription
factor (ATHB-14)GP:3132474 GB:Y11122 [Arabidopsis
thaliana];
Length = 852
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +3
Query: 267 KLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIE 446
+L RK N + EEN+ V N+V E + KH + T +G ++ + E ++
Sbjct: 89 RLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKH--QLHTASGTTTDNSCESVVV 146
Query: 447 RMQKREKQ 470
Q+ ++Q
Sbjct: 147 SGQQHQQQ 154
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +3
Query: 285 RKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKRE 464
R++N+ S + ++D G++ D+ V +RK K + T E+ + R ER +KRE
Sbjct: 763 RRKNKRSSREEVSSDDNGSS-DSDVDDRKEAKRRRKEEKKTR--KEEKKRRREERHRKRE 819
Query: 465 KQVKEKGVHNSTQ 503
++ K H +
Sbjct: 820 ERRGGKEKHKKQE 832
>At1g30490.1 68414.m03727 homeobox-leucine zipper transcription
factor (HB-9) identical to HD-Zip protein GB:CAA71854
GI:2145358 from [Arabidopsis thaliana]
Length = 841
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +3
Query: 267 KLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIE 446
+L RK + + EEN+ V N+V E + KH T +G ++ + E ++
Sbjct: 85 RLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRIHTA--SGTTTDNSCESVVV 142
Query: 447 RMQKREKQ 470
Q+R++Q
Sbjct: 143 SGQQRQQQ 150
>At4g38540.1 68417.m05456 monooxygenase, putative (MO2) identical to
GI:3426064
Length = 407
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +3
Query: 312 QNEENEDEG-TNVDNVVK----ERKYRKHNEETPTYTGGISEQARERLIERMQKR 461
+ EENE+EG ++ +K ERK+R + T YT G +Q+R + + + R
Sbjct: 330 ETEENEEEGYKRIEEGLKKYAGERKWRSIDLITTAYTVGFIQQSRGKWMNMFRDR 384
>At2g18550.1 68415.m02161 homeobox-leucine zipper family protein
similar to CRHB6 (GI:3868839) [Ceratopteris richardii];
contains Pfam PF00046: Homeobox domain
Length = 220
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +3
Query: 249 SLLGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQA 428
S LGLD A QNR ++N+ EDE T + N + K ++
Sbjct: 93 SELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYE 152
Query: 429 RERLIERMQKR 461
ER I+R+ KR
Sbjct: 153 AEREIQRLAKR 163
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/86 (18%), Positives = 42/86 (48%)
Frame = +3
Query: 264 DKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLI 443
+K ++ +++++ +N+E E + +N +KE + K EE+ + G +++ ++
Sbjct: 357 EKEDSSSQEESKEEEPENKEKEASSSQEENEIKETEI-KEKEESSSQEGNENKETEKKSS 415
Query: 444 ERMQKREKQVKEKGVHNSTQEEKKTQ 521
E +K ++K + + TQ
Sbjct: 416 ESQRKENTNSEKKIEQVESTDSSNTQ 441
>At2g13320.1 68415.m01468 expressed protein anf genefinder
Length = 129
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +3
Query: 273 AAAKRKQNRLISFQNEENEDEGTNVDNVV---KERKYRKHN----EETPTYTGGISEQAR 431
A + + RL+ + E+E D K++ YR+ EET E+
Sbjct: 38 AVGEEESRRLMEKTRRDGEEEEVTSDGGSWNGKKKLYRRRRRYLGEETDRLAAEAGEEEL 97
Query: 432 ERLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
RL+E ++R ++ +E+ N +EE++ + +
Sbjct: 98 RRLLEN-KRRGREEEERRRRNQIEEEERRRRR 128
>At5g45190.1 68418.m05547 cyclin family protein similar to cyclin T1
[Equus caballus] GI:5052355; contains Pfam profile
PF00134: Cyclin, N-terminal domain
Length = 579
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +3
Query: 282 KRKQNRLISFQNEENED-EGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQK 458
K K+ ++ S EN D GT ++ + K+ EE +S R +
Sbjct: 476 KTKERKVQSRPKAENSDLMGTEHGEILDVKGEVKNTEEGEMVNNNVSPMMHSRKRKMGSP 535
Query: 459 REKQVKEKGVHNSTQEEK 512
EKQ + K HNS E+
Sbjct: 536 PEKQSEGKRRHNSENGEE 553
>At3g59820.1 68416.m06675 calcium-binding mitochondrial
protein-related contains weak similarity to
Calcium-binding mitochondrial protein Anon-60Da
(Swiss-Prot:P91927) [Drosophila melanogaster]
Length = 755
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 291 QNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKREKQ 470
Q LI + E+ E+E T + +V + + E T EQAR R++E+ K
Sbjct: 525 QEELIKEEEEKEEEELTRIKDVKGGDEDKALQEMTIPTASEAQEQARARVLEQQDDLCKL 584
Query: 471 VKEKGV 488
+ GV
Sbjct: 585 SRALGV 590
>At3g24720.1 68416.m03104 protein kinase family protein protein
kinase family; similar to tyrosine-protein kinase
GB:P18160 from [Dictyostelium discoideum]
Length = 297
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 91 HLS*IIYRIIKQIVR*PIPKKMSIVWRELL 180
H II I+K +R PIPK S W++L+
Sbjct: 229 HCGAIIGGIVKNTLRPPIPKSCSPEWKKLM 258
>At2g44590.3 68415.m05551 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 612
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 303 ISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQK 458
+ N D NVD +V RK R++ E +P Y + E L + + K
Sbjct: 239 VGIVNRSQADINKNVDMMVARRKEREYFETSPDYGHLATRMGSEYLAKLLSK 290
>At2g44590.2 68415.m05550 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 595
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 303 ISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQK 458
+ N D NVD +V RK R++ E +P Y + E L + + K
Sbjct: 222 VGIVNRSQADINKNVDMMVARRKEREYFETSPDYGHLATRMGSEYLAKLLSK 273
>At2g44590.1 68415.m05549 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 596
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 303 ISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQK 458
+ N D NVD +V RK R++ E +P Y + E L + + K
Sbjct: 222 VGIVNRSQADINKNVDMMVARRKEREYFETSPDYGHLATRMGSEYLAKLLSK 273
>At2g27120.1 68415.m03259 DNA-directed DNA polymerase epsilon
catalytic subunit, putative similar to SP|Q07864 DNA
polymerase epsilon, catalytic subunit A (EC 2.7.7.7) (DNA
polymerase II subunit A) {Homo sapiens}; contains Pfam
profiles: PF03175 DNA polymerase type B, organellar and
viral, PF00136 DNA polymerase family B, PF03104 DNA
polymerase family B, exonuclease domain
Length = 2138
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 261 LDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKE-RKYRKHNEETPTYTGGISEQARER 437
L+K K +Q +++ + N+D T DNVV + ++ K N + G AR
Sbjct: 1128 LEKKVCDKFRQGKIVDMFSSANKDHSTTQDNVVADIEEFCKENRPS---VKGPKPVARSF 1184
Query: 438 LIERMQKREKQ 470
++R KQ
Sbjct: 1185 EVDRNHSEGKQ 1195
>At2g14240.1 68415.m01587 hypothetical protein and genefinder
Length = 128
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +3
Query: 273 AAAKRKQNRLISFQNEENEDE----GTNVDNVVKERKYRKH--NEETPTYTGGISEQARE 434
AA + + RL+ + E+E G + + K + R+H EET E+
Sbjct: 38 AAREEESRRLLEKTRRDGEEEVRSDGGSWNGKKKLYRRRRHYLGEETDRLAAEAGEEELR 97
Query: 435 RLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
RL+E ++R + +E+ N +EE++ + +
Sbjct: 98 RLLEN-KRRGGEEEERRRRNQIEEEERRRRR 127
>At1g33680.1 68414.m04166 KH domain-containing protein similar to
FUSE binding protein 2 GB:AAC50892 GI:1575607 from [Homo
sapiens]
Length = 759
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +3
Query: 219 KPADFQFAKPSLLGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEE 392
KP D Q P ++ ++ + K+ + QN E ED+ ++VV +++ ++E
Sbjct: 124 KPEDNQLVTPEVVTSQDVSVEESKEVNISGSQN-EGEDDSKETNDVVAQKEVENGSKE 180
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/96 (19%), Positives = 45/96 (46%)
Frame = +3
Query: 240 AKPSLLGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGIS 419
AK + +D+ K+K+ ++ EDE + K++K K ++ G +
Sbjct: 48 AKENNALIDEEPKKKKKKKNKKRGDTDDGEDEAVAEEEPKKKKKKNKKLQQ----RGDTN 103
Query: 420 EQARERLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
++ E + E + ++K+ K++ + EE++ + K
Sbjct: 104 DEEDEVIAEEEEPKKKKKKQRKDTEAKSEEEEVEDK 139
>At5g54460.1 68418.m06782 wound-responsive protein-related contains
weak similarity to KED [Nicotiana tabacum]
gi|8096269|dbj|BAA95789
Length = 141
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 363 ERKYRKHNEETPTYTGGISEQARERLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
ERK +++ ++P + E+ E + K EK+ +E+G N +EE+ T+ K
Sbjct: 97 ERKNKRNQSKSP-----VKEEGAEPV-----KEEKEKEEQGTENEEEEEEATETK 141
>At2g04970.1 68415.m00518 hypothetical protein similar to At2g15200,
At1g32830, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 808
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/76 (19%), Positives = 39/76 (51%)
Frame = +3
Query: 255 LGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARE 434
LG++++ A+ ++ + + +E E+E + +E + ++ + T I +Q E
Sbjct: 407 LGIERVPASYTREEQKEEDEKKEQEEEKQEEEGKEEELEKVEYRGDEGTEKQEIPKQGNE 466
Query: 435 RLIERMQKREKQVKEK 482
+ +K+E++ KE+
Sbjct: 467 EMEGEEEKQEEEGKEE 482
>At5g58880.1 68418.m07377 hypothetical protein
Length = 1088
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +3
Query: 306 SFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKREKQVKEKG 485
SF+ E E+E +N+D +E ++ + + G +S + E ++ R + ++ VK
Sbjct: 742 SFEREVQEEEESNLDKSTEETT-KETESDLKSSPGQVSTELLESVV-REENGQELVKSAD 799
Query: 486 VHNSTQEEKKT 518
EE+KT
Sbjct: 800 EKAMLVEEEKT 810
>At4g34400.1 68417.m04886 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 389
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 210 QKDKPADFQFAKPSLLGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNV 356
+ D ++F+ AKP++ K K+K+ + S +EE+E+E ++ D +
Sbjct: 182 ETDTDSEFKVAKPTIPKSQK--KGKKKEQVVESSDDEEDEEEDSDSDYI 228
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/99 (23%), Positives = 38/99 (38%)
Frame = +3
Query: 207 RQKDKPADFQFAKPSLLGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHN 386
++ K + AK ++ KLA K I Q E + E + K++
Sbjct: 472 KEMRKQEEIAKAKQAMERKKKLAE-KAAAKAAIRAQKEAEKKEKKEQEKKAKKKTGGNTE 530
Query: 387 EETPTYTGGISEQARERLIERMQKREKQVKEKGVHNSTQ 503
ET E+ + E ++EK KEK + N T+
Sbjct: 531 TETEEVPEASEEEIEAPVQEEKPQKEKVFKEKPIRNRTR 569
>At3g11590.1 68416.m01416 expressed protein
Length = 622
Score = 27.5 bits (58), Expect = 8.9
Identities = 26/106 (24%), Positives = 41/106 (38%)
Frame = +3
Query: 210 QKDKPADFQFAKPSLLGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNE 389
Q D+P+ +L +L A+ + N+LI EN D + +E+ K NE
Sbjct: 246 QDDRPSSSMSLVSALHS--ELERARLQVNQLIHEHKPENNDISYLMKRFAEEKAVWKSNE 303
Query: 390 ETPTYTGGISEQARERLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
+ I A E +ER +R + K + E K K
Sbjct: 304 Q-EVVEAAIESVAGELEVERKLRRRFESLNKKLGKELAETKSALMK 348
>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Frame = +3
Query: 282 KRKQNRLISFQNEENEDEGTNVDN-------VVK---ERKYRKHNEETPTYTGGISEQAR 431
K + + + EE+ T VDN +VK E K K ++ ++
Sbjct: 283 KENAKKTVKARKEEHARIRTLVDNAYRKDPRIVKRKEEEKAEKQQKKDAKIQAKKKQEED 342
Query: 432 ERLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
+ +KR K+ +EK S Q++KKT+ +
Sbjct: 343 AAIAAEEEKRRKEEEEKRAAESAQQQKKTKER 374
>At1g49250.1 68414.m05522 ATP dependent DNA ligase family protein
contains Pfam profile: PF01068 ATP dependent DNA ligase
domain
Length = 657
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 297 RLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISE 422
RL+ + ++N +E T D + + + +KHN+ P+ G + +
Sbjct: 617 RLVRIRKDKNPEEATTSDQIAEMYQAQKHNQ--PSNQGKVDD 656
>At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 251
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 255 LGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEE 392
+G + A+R R++S ++ E +G N +NV + + YRK E+
Sbjct: 48 VGYKNVIGARRASWRILSSIEQKEESKG-NDENVKRLKNYRKRVED 92
>At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 255 LGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEE 392
+G + A+R R++S ++ E +G N +NV + + YRK E+
Sbjct: 48 VGYKNVIGARRASWRILSSIEQKEESKG-NDENVKRLKNYRKRVED 92
>At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 255 LGLDKLAAAKRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEE 392
+G + A+R R++S ++ E +G N +NV + + YRK E+
Sbjct: 48 VGYKNVIGARRASWRILSSIEQKEESKG-NDENVKRLKNYRKRVED 92
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,320,795
Number of Sequences: 28952
Number of extensions: 291370
Number of successful extensions: 1000
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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