Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g07
(786 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0IG61 Cluster: Malate synthase; n=2; Aedes aegypti|Rep... 209 7e-53
UniRef50_Q4T6G9 Cluster: Chromosome undetermined SCAF8763, whole... 171 2e-41
UniRef50_Q54RR4 Cluster: Malate synthase; n=1; Dictyostelium dis... 96 1e-18
UniRef50_Q23H25 Cluster: Malate synthase A family protein; n=1; ... 96 1e-18
UniRef50_P30952 Cluster: Malate synthase 1, glyoxysomal; n=208; ... 96 1e-18
UniRef50_Q10663 Cluster: Bifunctional glyoxylate cycle protein (... 95 2e-18
UniRef50_Q0RN84 Cluster: Malate synthase A; n=3; Actinomycetales... 93 5e-18
UniRef50_A5FJ45 Cluster: Malate synthase A; n=2; Flavobacteriace... 92 1e-17
UniRef50_A7RM90 Cluster: Predicted protein; n=1; Nematostella ve... 89 2e-16
UniRef50_A1RLY8 Cluster: Malate synthase A; n=15; Gammaproteobac... 81 2e-14
UniRef50_P45458 Cluster: Malate synthase, glyoxysomal; n=3; core... 81 3e-14
UniRef50_P49081 Cluster: Malate synthase, glyoxysomal; n=453; ce... 77 4e-13
UniRef50_Q5YLB3 Cluster: Malate synthase 2; n=1; Paracoccidioide... 77 7e-13
UniRef50_P77947 Cluster: Malate synthase; n=9; Bacteria|Rep: Mal... 76 9e-13
UniRef50_Q8LPA6 Cluster: Malate synthase-isocitrate lyase; n=1; ... 54 5e-06
UniRef50_Q1IHE3 Cluster: Malate synthase; n=1; Acidobacteria bac... 38 0.38
UniRef50_Q4A632 Cluster: Putative uncharacterized protein; n=2; ... 37 0.66
UniRef50_O45671 Cluster: Putative uncharacterized protein; n=1; ... 36 0.87
UniRef50_Q1FJK5 Cluster: ABC-2 precursor; n=1; Clostridium phyto... 36 1.5
UniRef50_Q1J389 Cluster: Malate synthase; n=1; Deinococcus geoth... 33 6.1
UniRef50_UPI00006DCE36 Cluster: hypothetical protein CdifQ_04003... 33 8.1
UniRef50_A0EA50 Cluster: Chromosome undetermined scaffold_85, wh... 33 8.1
UniRef50_Q9ZCN2 Cluster: Uncharacterized protein RP691; n=19; Ri... 33 8.1
>UniRef50_Q0IG61 Cluster: Malate synthase; n=2; Aedes aegypti|Rep:
Malate synthase - Aedes aegypti (Yellowfever mosquito)
Length = 545
Score = 209 bits (510), Expect = 7e-53
Identities = 103/207 (49%), Positives = 135/207 (65%), Gaps = 1/207 (0%)
Frame = +2
Query: 167 MVHDVILLQVPLPKLEELQKTIFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDP 346
++ DV + + P +LE IF+ L+F+ L FD ++E L R R + IK
Sbjct: 3 ILKDVCIERAP-HRLETAYGEIFTKGALQFLQDLFTEFDCEVEKLLRRRLERQLNIKQGK 61
Query: 347 FI-DFKNSPERRDKSWKIAPLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDD 523
+ +F+N+ E D WKI LP+RL+NR LDLGDVS +NT +FV +L VQGIQVDFDD
Sbjct: 62 WKPEFRNNSEELD--WKINDLPVRLRNRKLDLGDVSPANTTNFVDSLYAKVQGIQVDFDD 119
Query: 524 GHCPTWRNQLLAFNNINLAVSGKLQGAPLTITTCPVLMFRPRAWNMIEHNILIDGKEAIG 703
GHCPTWRN + N+ AV +L GAP I CP+LM RPRA+NMIEH+ +++GK+ IG
Sbjct: 120 GHCPTWRNTVQGLYNVTAAVHARLPGAPANIEDCPILMLRPRAFNMIEHHCMVNGKQVIG 179
Query: 704 PLVDFAVLMYHNARKLYEANSGPYFLL 784
PL DFA+LMYHNA + E GPYF L
Sbjct: 180 PLFDFAILMYHNANLMTELGVGPYFYL 206
>UniRef50_Q4T6G9 Cluster: Chromosome undetermined SCAF8763, whole
genome shotgun sequence; n=20; Eumetazoa|Rep: Chromosome
undetermined SCAF8763, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 542
Score = 171 bits (415), Expect = 2e-41
Identities = 85/202 (42%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Frame = +2
Query: 188 LQVPLPKLEELQKTIFSSEVLEFIAALHRNFDEKI-ELLYENRKRRAVEIKNDPFIDFKN 364
L P LE + +F+S+ L F+ L FD+++ E+L+ R+A + DF
Sbjct: 3 LSPPPSGLEAEYEALFTSDSLHFLHDLVSTFDKEVDEVLWLRVSRKAHSDLSGELPDFPE 62
Query: 365 SP--ERRDKSWKIAPLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPT 538
S +R W++ P+P RLQ RH+D+GD++ +T F+ AL QGIQVDFDDG+CPT
Sbjct: 63 SSTHKRGAPDWRVKPVPPRLQRRHVDIGDLAPCDTERFIKALQTPAQGIQVDFDDGNCPT 122
Query: 539 WRNQLLAFNNINLAVSGKLQGAPLTITTCPVLMFRPRAWNMIEHNILIDGKEAIGPLVDF 718
+ NQ+ +N+ AV +L P I+ PVLM RPRAWNM+E+N++++GK+ GPL DF
Sbjct: 123 YHNQIKGIHNVMKAVLNQLPNVP-HISQGPVLMLRPRAWNMVENNLMVEGKKVPGPLFDF 181
Query: 719 AVLMYHNARKLYEANSGPYFLL 784
+LM+H L+E SGP+F L
Sbjct: 182 GLLMFHCGNTLFENKSGPFFYL 203
>UniRef50_Q54RR4 Cluster: Malate synthase; n=1; Dictyostelium
discoideum AX4|Rep: Malate synthase - Dictyostelium
discoideum AX4
Length = 542
Score = 95.9 bits (228), Expect = 1e-18
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Frame = +2
Query: 242 EVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDPFIDFKNSPE----RRDKSWKIAPLP 409
++ EF+ LH F+ K + L + R I K E R D +WKI +P
Sbjct: 3 KINEFLKVLHLEFEGKRQELLKERILIQSNITQSLGKCLKKPIETFEIRNDSTWKIREIP 62
Query: 410 IRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAVSG 589
LQ+R +D+ + +N V + G+QVDFDDG+ P+ N L A +NIN V+
Sbjct: 63 KILQDRSVDIVCLDVTNYQSMVECVESGSNGVQVDFDDGYSPSHSNNLKAQSNINKIVND 122
Query: 590 KLQGAPLTITTCPVLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHNARKLYEANSG 769
L + +L+ RPR+ N+ E N +DG G + D V +++NA KL E N G
Sbjct: 123 N----RLNQSNKALLLVRPRSMNLDEINHCVDGVPISGTIFDLGVFLFNNAAKLIEMNRG 178
Query: 770 PYFLL 784
P+ +
Sbjct: 179 PFLYI 183
>UniRef50_Q23H25 Cluster: Malate synthase A family protein; n=1;
Tetrahymena thermophila SB210|Rep: Malate synthase A
family protein - Tetrahymena thermophila SB210
Length = 537
Score = 95.9 bits (228), Expect = 1e-18
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Frame = +2
Query: 209 LEELQKT--IFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDPFIDFKNSPER-R 379
LEE Q T + + E L+F+A LHR F+ + L RK RA + + + + R
Sbjct: 11 LEENQYTREVLTPECLQFVATLHRQFNSTRKALLRARKERAQLVDRGMALTYPPETKHIR 70
Query: 380 DKSWKIAPLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQ--- 550
+ WK+AP P ++ R ++L N + A+N DF+D PTW NQ
Sbjct: 71 EGDWKVAPPPKDVERRWIEL--TGPPNPKLTINAMNSGADVFMADFEDALAPTWVNQVSG 128
Query: 551 ---LLAFNNINLAVSGKLQGAPLTITTCPVLMFRPRAWNMIEHNILIDGKEAIGPLVDFA 721
L+ N L + K + L + VL RPR W++ E +++IDG+ L DFA
Sbjct: 129 QKTLILANKKALQFNDKNKEYKLNPDSYTVLFVRPRGWHLEETHLVIDGEPCSASLFDFA 188
Query: 722 VLMYHNAR-KLYEANSGPYFLL 784
V +HN R +L G Y+ L
Sbjct: 189 VYFFHNVRLRLANGCGGIYYYL 210
>UniRef50_P30952 Cluster: Malate synthase 1, glyoxysomal; n=208;
cellular organisms|Rep: Malate synthase 1, glyoxysomal -
Saccharomyces cerevisiae (Baker's yeast)
Length = 554
Score = 95.9 bits (228), Expect = 1e-18
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Frame = +2
Query: 230 IFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDPF-IDF--KNSPERRDKSWKIA 400
I + + LEFI LHR F+ K + L ENR+ ++ + + +DF + + R D +W+
Sbjct: 31 ILTKDALEFIVLLHRTFNNKRKQLLENRQVVQKKLDSGSYHLDFLPETANIRNDPTWQGP 90
Query: 401 PLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 580
L L NR ++ N + ALN V DF+D PTW N + N+ A
Sbjct: 91 ILAPGLINRSTEITGPPLRNM--LINALNAPVNTYMTDFEDSASPTWNNMVYGQVNLYDA 148
Query: 581 VSGKLQ-GAPL-------TITTCPVLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYH 736
+ ++ P + P ++ RPR W+M+E ++ +D + + DF + YH
Sbjct: 149 IRNQIDFDTPRKSYKLNGNVANLPTIIVRPRGWHMVEKHLYVDDEPISASIFDFGLYFYH 208
Query: 737 NARKLYEANSGPYFLL 784
NA++L + GPYF L
Sbjct: 209 NAKELIKLGKGPYFYL 224
>UniRef50_Q10663 Cluster: Bifunctional glyoxylate cycle protein
(Gex-3-interacting protein 7) [Includes: Isocitrate lyase
(EC 4.1.3.1) (Isocitrase) (Isocitratase) (ICL); Malate
synthase (EC 2.3.3.9)]; n=9; cellular organisms|Rep:
Bifunctional glyoxylate cycle protein (Gex-3-interacting
protein 7) [Includes: Isocitrate lyase (EC 4.1.3.1)
(Isocitrase) (Isocitratase) (ICL); Malate synthase (EC
2.3.3.9)] - Caenorhabditis elegans
Length = 968
Score = 95.1 bits (226), Expect = 2e-18
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Frame = +2
Query: 230 IFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDP-FIDFKNSPE--RRDKSWKIA 400
I + + L F+ L+ F+ + L R + +I N F DF E R D+ WK A
Sbjct: 456 ILTPDALRFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 515
Query: 401 PLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 580
+P LQ+R +++ ++ + A+N DF+D + PTWRNQL N+ A
Sbjct: 516 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 573
Query: 581 VSGKLQGA-PLTITTCP------VLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHN 739
V + P T VL RPR W++ E ++LI + G L DF + ++HN
Sbjct: 574 VRNNISYTHPTTKKEYTLNEKHAVLKVRPRGWHLPEKHVLIHNQPTSGSLFDFGLFVFHN 633
Query: 740 ARKLYEANSGPYFLL 784
A+ L SGPYF L
Sbjct: 634 AKALIAQGSGPYFYL 648
>UniRef50_Q0RN84 Cluster: Malate synthase A; n=3;
Actinomycetales|Rep: Malate synthase A - Frankia alni
(strain ACN14a)
Length = 576
Score = 93.5 bits (222), Expect = 5e-18
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Frame = +2
Query: 224 KTIFSSEVLEFIAALHRNFDEK-IELLYENRKRRAVEIKNDPFIDF--KNSPERRDKSWK 394
+ I + + LEF+ AL F + LL R+RR + +DF + + R D+SW+
Sbjct: 48 REILTPQALEFLIALDTVFAARWAGLLAARRERRLLLASGAAVLDFLPETAAIRADESWR 107
Query: 395 IAPLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNIN 574
+A L +R +++ ++ + V ALN + DF D PTW N + N+
Sbjct: 108 VAGAAPGLTDRRVEI--IAPTQRTATVTALNSGARVWLADFADTTAPTWFNVIAGQLNLL 165
Query: 575 LAVSGKLQ-----GAPLTITTCPV-LMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYH 736
A+ G+L+ G + P ++ RPR W++ EH++LIDG+ LVDF + +H
Sbjct: 166 DAIEGRLEVTTPTGRRHRVGPDPATIVVRPRGWHLSEHHLLIDGRPMSASLVDFGLYFFH 225
Query: 737 NARKLYEANSGPYFLL 784
AR+ SGPYF L
Sbjct: 226 CARRQLARGSGPYFCL 241
>UniRef50_A5FJ45 Cluster: Malate synthase A; n=2;
Flavobacteriaceae|Rep: Malate synthase A -
Flavobacterium johnsoniae UW101
Length = 540
Score = 92.3 bits (219), Expect = 1e-17
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Frame = +2
Query: 230 IFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDPFIDF-KNSPERRDKSWKIAPL 406
I++ E + FI LHR F+ + +LL R+++ V F + R+ SWK +
Sbjct: 32 IWTEEAIVFITELHRKFESQRKLLLLQREQKQVTFDQGIMPVFIPETKSVREGSWKAGEI 91
Query: 407 PIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAVS 586
P L +R +++ + + ALN + DF+D PTW+N + N+ AV+
Sbjct: 92 PKDLLDRRVEI--TGPVDRKMIINALNSGAKTFMADFEDSTSPTWQNLMDGQVNLIDAVN 149
Query: 587 GKLQGAPLTITTC-------PVLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHNAR 745
+ L L+ RPR ++ E ++L++G E G L+DF + ++HN +
Sbjct: 150 KTITFTDLVKQKSYHLNEKIATLIVRPRGLHLPEKHVLVEGNEVSGSLIDFGLYVFHNHK 209
Query: 746 KLYEANSGPYFLL 784
+L E NSGPYF +
Sbjct: 210 RLLENNSGPYFYI 222
>UniRef50_A7RM90 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 530
Score = 88.6 bits (210), Expect = 2e-16
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 8/193 (4%)
Frame = +2
Query: 230 IFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDPFIDFKNSPERRDKSWKIAPLP 409
I S + LEF+A LHR F+ + L + R + EI I + S +D WK++ +P
Sbjct: 22 ILSYQALEFLADLHRRFNYTRKQLLKKRMQIQSEINAGKKITYPVSNHSKD--WKVSAVP 79
Query: 410 IRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAVSG 589
LQ RH+++ ++ + A+N DF+D PTW+N + N+ A
Sbjct: 80 HDLQMRHVEI--TGPTDCKMVINAMNSGADMYMADFEDSLSPTWKNIVEGQVNLLEANKK 137
Query: 590 KLQ-----GAPLTI---TTCPVLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHNAR 745
+Q G+ + T C L+ R R W++ E +I+ D + G LVDF + +HN
Sbjct: 138 TIQFVNPDGSVRELKDKTAC--LLVRTRGWHLDERHIICDNEPMAGALVDFGLYFFHNLH 195
Query: 746 KLYEANSGPYFLL 784
ANS PYF L
Sbjct: 196 VRLAANSAPYFYL 208
>UniRef50_A1RLY8 Cluster: Malate synthase A; n=15;
Gammaproteobacteria|Rep: Malate synthase A - Shewanella
sp. (strain W3-18-1)
Length = 575
Score = 81.4 bits (192), Expect = 2e-14
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Frame = +2
Query: 221 QKTIFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDPFIDFKNSPER-RDKSWKI 397
Q+ IF+ + + +L R F ++ +L RK + I DF RD +W+I
Sbjct: 60 QEVIFTDGAVALLESLCREFAGEVPVLLAKRKEKQARIDKGGLPDFLPETRAIRDGAWQI 119
Query: 398 APLPIRLQNRHLDL-GDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNIN 574
+P L +R +++ G V + ALN + + DF+D P+W+ + N+
Sbjct: 120 RGIPTDLLDRRVEITGPVERKMVIN---ALNANAKVFMADFEDSLAPSWQKVVEGQINLR 176
Query: 575 LAVSGKLQ-GAPLT-----ITTCP-VLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMY 733
AV G ++ AP T + P VL+ R R ++ E ++ +G+ G L DFA+ Y
Sbjct: 177 DAVRGDIEYTAPETGKHYKLGPHPAVLICRVRGLHLKEKHVQFNGESIPGSLFDFALYFY 236
Query: 734 HNARKLYEANSGPYFLL 784
HN R+L SGPYF +
Sbjct: 237 HNYRQLLAKGSGPYFYI 253
>UniRef50_P45458 Cluster: Malate synthase, glyoxysomal; n=3; core
eudicotyledons|Rep: Malate synthase, glyoxysomal -
Glycine max (Soybean)
Length = 564
Score = 81.0 bits (191), Expect = 3e-14
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Frame = +2
Query: 230 IFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDPFIDFKNSPER-RDKSWKIAPL 406
I + + L+F+A L R F I+ E R+ + +F + R++ W AP+
Sbjct: 36 ILTKDALKFVADLQREFRNHIKYALECRREAKKKYNEGALPEFDPATTYIREQEWVCAPV 95
Query: 407 PIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAVS 586
P + +R +++ + + ALN + DF+D P W N + N+ AV+
Sbjct: 96 PPAVADRKVEI--TGPVDRKMVINALNSGAKVFMADFEDALSPGWENLMRGQVNLKDAVA 153
Query: 587 G------KLQGAPLTITTCPVLMF-RPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHN-- 739
G K + + +F RPR W++ E +ILIDG+ A G LVDF + YH+
Sbjct: 154 GTISLHDKARNRVYKLNDQTAKLFVRPRGWHLPEAHILIDGEPATGCLVDFGLYFYHSYS 213
Query: 740 -ARKLYEANSGPYFLL 784
R+ A GP+F L
Sbjct: 214 AFRRTQGAGFGPFFYL 229
>UniRef50_P49081 Cluster: Malate synthase, glyoxysomal; n=453;
cellular organisms|Rep: Malate synthase, glyoxysomal -
Zea mays (Maize)
Length = 559
Score = 77.4 bits (182), Expect = 4e-13
Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Frame = +2
Query: 230 IFSSEVLEFIAALHRNFDEKIELLYENRK--RRAVEIKNDPFIDFKNSPERRDKSWKIAP 403
I + + L+F+A L R F + E R+ +R + P D + R + W A
Sbjct: 29 ILTRDALDFVAGLQREFRGAVRYAMEQRREAQRRYDAGELPRFDPATTLVR-EGDWTCAS 87
Query: 404 LPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAV 583
+P + +R +++ A + ALN + DF+D PTW N + N+ AV
Sbjct: 88 VPPAVADRTVEITG-PAEPRKMVINALNSGAKVFMADFEDAMSPTWENLMHGQVNLRDAV 146
Query: 584 SGKL--QGAPLTIT-----TCPVLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHN 739
+G + + AP T L RPR W++ E +ILIDG+ AIG LVDF + +HN
Sbjct: 147 AGTISFRDAPRGRTYELNDRTAKLFVRPRGWHLPEAHILIDGEPAIGCLVDFGLYFFHN 205
>UniRef50_Q5YLB3 Cluster: Malate synthase 2; n=1; Paracoccidioides
brasiliensis|Rep: Malate synthase 2 - Paracoccidioides
brasiliensis
Length = 210
Score = 76.6 bits (180), Expect = 7e-13
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Frame = +2
Query: 299 LYENRKRRAVEIKNDPFIDFKNSPE--RRDKSWKIAPLPIRLQNRHLDLGDVSASNTAHF 472
L E R +R ++ + F + + R D SW++APL L++R +++ ++
Sbjct: 1 LLEARTQRVADVSAGKDLHFLDETKSVREDDSWQVAPLAPGLEDRRVEM--TGPTDRKMT 58
Query: 473 VVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAVSGKLQGA--------PLTITTCP 628
+ ALN + D +D + P W N + N+ ++ GKL+ P+
Sbjct: 59 INALNSGAKAWLADQEDANTPLWGNVVAGPLNLMDSLDGKLEFTSPEGKEYKPVPFEERA 118
Query: 629 VLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHNARKLYEANSGPYFLL 784
++ RPR W++ E +I +DG+ LVDFA+L+ +K +A GPYF L
Sbjct: 119 TIIVRPRGWHLPEKHITVDGRRPPARLVDFALLLTVCGQKQIDAGEGPYFYL 170
>UniRef50_P77947 Cluster: Malate synthase; n=9; Bacteria|Rep: Malate
synthase - Streptomyces arenae
Length = 543
Score = 76.2 bits (179), Expect = 9e-13
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Frame = +2
Query: 197 PLPKLEELQKTIFSSEVLEFIAAL-HRNFDEKIELLYENRKRRAVEIKNDPFIDF--KNS 367
PLP+ EE + + L F+A L HR F + R A EI +DF + +
Sbjct: 16 PLPRQEE----VLTDAALAFVAELLHRRFTRAVTNSSPRRADAAREIARTSTLDFLPETA 71
Query: 368 PERRDKSWKIAPLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRN 547
R D SW++A P L +R +++ ++ + ALN + DF++ PTW N
Sbjct: 72 AVRADDSWRVAG-PAALNDRRVEI--TGPTDRKMTINALNSGAKVWLADFEEPSAPTWEN 128
Query: 548 QLLAFNNINLAVSGKL----QGAPLTITTCPVLMFRP----RAWNMIEHNILIDGKEAIG 703
+L N++ A + + + T P+ +RP R W++ E + L+D + G
Sbjct: 129 VVLGQVNLSDAYTRNIDFTDERTGKTYALRPLKSWRPSSWPRGWHLNERH-LVDPDGSFG 187
Query: 704 P---LVDFAVLMYHNARKLYEANSGPYFLL 784
+VDF + +HNA++L + GPYF L
Sbjct: 188 ARRVVVDFGLYFFHNAQRLLDLGKGPYFYL 217
>UniRef50_Q8LPA6 Cluster: Malate synthase-isocitrate lyase; n=1;
Euglena gracilis|Rep: Malate synthase-isocitrate lyase -
Euglena gracilis
Length = 1165
Score = 53.6 bits (123), Expect = 5e-06
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Frame = +2
Query: 224 KTIFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKND-PF--IDFKNSPERRDKSWK 394
+ +FS + +F++ L+R F ++ L ++RK I+ P ++ D +WK
Sbjct: 36 RLVFSKDTKDFLSELNRQFAYEVVELSKHRKGLHESIRRTLPSGQVELPTLAGANDPNWK 95
Query: 395 IAPLPIRLQNRHLDLGDVSASNTAHFVV-ALNEDVQGIQVDFDDGHCPTWRNQLLAFNNI 571
+AP P LQ R +++ +N A V+ LN +D +D P+ +N + NI
Sbjct: 96 VAPTPEVLQKRRVEI--TGPANDAKMVINMLNSGADACMIDLEDAMAPSGKNVVEGHFNI 153
Query: 572 NLAVSGKL-QGAPL--------TITTCP-VLMFRPRAWNMIE-HNILIDGKEAIGPLVDF 718
A G+L PL I P LM R R +M E H L D
Sbjct: 154 YKAARGELVYEQPLGDGKFKRYQIGQTPSTLMVRVRGLHMKEVHATAAHVGPVPATLFDI 213
Query: 719 AVLMYHNARKLYEANSGPYFLL 784
V + +N + L + GP+ +
Sbjct: 214 GVHLANNGKYLQDHGLGPFLYI 235
>UniRef50_Q1IHE3 Cluster: Malate synthase; n=1; Acidobacteria
bacterium Ellin345|Rep: Malate synthase - Acidobacteria
bacterium (strain Ellin345)
Length = 524
Score = 37.5 bits (83), Expect = 0.38
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Frame = +2
Query: 251 EFIAALHRNFDEKIELLYENRKRRAVEIKNDPFIDFKNSPERRDKSWKIAPLPIRLQNRH 430
EF+ LH F + + L RKR + E +W+I LP +++
Sbjct: 34 EFLETLHHEFTPRQQKLVAKRKRVLEASHRAELPEHMQPSEATQGNWRI-ELPKWCEDQR 92
Query: 431 LDLGDVSASNTAHFV-VALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAVSGKL 595
+ ++ A V LN G+ +D +D W +Q L N+ A+ G+L
Sbjct: 93 NQM--TGPADEAELVGKMLNSGAPGVMLDLEDSTVNQWDHQQLGMKNVLSALHGEL 146
>UniRef50_Q4A632 Cluster: Putative uncharacterized protein; n=2;
Mycoplasma synoviae 53|Rep: Putative uncharacterized
protein - Mycoplasma synoviae (strain 53)
Length = 137
Score = 36.7 bits (81), Expect = 0.66
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 176 DVILLQVPLPKLEELQKTIFSSEVLEFIAALHRNFDEKIELLYEN-RKRRAVEIKNDPFI 352
D ++ PL E KT + EFI L +NFD+KI+L+ E+ R+A EI + I
Sbjct: 54 DKFIIGYPLNSRGEKTKTCLLID--EFIIHLEKNFDQKIKLINESYSSRKASEILHQANI 111
Query: 353 DFKNSPERRD 382
K +++D
Sbjct: 112 KNKKQKDKKD 121
>UniRef50_O45671 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 1251
Score = 36.3 bits (80), Expect = 0.87
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 407 PIRLQNRHLDLGDVSASNTAHFVVALNEDVQGI---QVDFDDGHCPTWRNQLLAFNNINL 577
PIR++NR D DV H + E + Q+ FDD H +QL++ + +NL
Sbjct: 841 PIRIKNR--DCMDVLCDEMKHILEKNPEKLNEFIVEQMGFDDEHLMRLHDQLVSISKVNL 898
Query: 578 AVSGKLQ 598
+GK+Q
Sbjct: 899 ITAGKVQ 905
>UniRef50_Q1FJK5 Cluster: ABC-2 precursor; n=1; Clostridium
phytofermentans ISDg|Rep: ABC-2 precursor - Clostridium
phytofermentans ISDg
Length = 419
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +2
Query: 188 LQVPLPKLEELQKTIFSSEVLEFIAALHRNFDEKIELLYENRKR 319
+Q+ LPK + ++ I S E E I L N DE+I LLYEN R
Sbjct: 125 IQLYLPK--DFEERILSGEYKEAILVLKSNEDERIPLLYENLNR 166
>UniRef50_Q1J389 Cluster: Malate synthase; n=1; Deinococcus
geothermalis DSM 11300|Rep: Malate synthase -
Deinococcus geothermalis (strain DSM 11300)
Length = 460
Score = 33.5 bits (73), Expect = 6.1
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +2
Query: 377 RDKSWKIAPLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLL 556
R W++AP P L+ R ++ V S+ A AL + DFDD PT N
Sbjct: 43 RQADWQVAPPPAELRGRVVE-QLVEPSDAAAIQAALEAGPDALIFDFDDTFSPTPANVRA 101
Query: 557 AFNNINLAVSGKLQGAPLTIT 619
N+ + G PL +T
Sbjct: 102 GHANLRTLPTA---GGPLPMT 119
>UniRef50_UPI00006DCE36 Cluster: hypothetical protein
CdifQ_04003581; n=1; Clostridium difficile
QCD-32g58|Rep: hypothetical protein CdifQ_04003581 -
Clostridium difficile QCD-32g58
Length = 432
Score = 33.1 bits (72), Expect = 8.1
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -1
Query: 423 FCNL-IGKGAIFQLLSLRSGEFLKSIKGSFFISTARRFLFSYNNSIFSSKLRCRAAINSR 247
F NL IG + + + E L S+ G+ F + + +F+ NS+ + IN +
Sbjct: 16 FINLCIGSIYAWSVFASPMAEHLNSLAGTTFTAASLAIVFTVTNSVGPITMITGGMINDK 75
Query: 246 TSLEKIVFCNSSSFGSG 196
+K+VF FG G
Sbjct: 76 FGPKKVVFVGGLIFGIG 92
>UniRef50_A0EA50 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 33.1 bits (72), Expect = 8.1
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Frame = -1
Query: 402 GAIFQLLSLRSGEFLKSIKGSFFISTARRFLFSYNNS-----IFSSKLRCRAAINSRTSL 238
G I Q+L++ G FLK I +F LFSYN++ I S ++ I S +SL
Sbjct: 339 GGILQILTMIVGIFLKPIIENFMKFEIASQLFSYNDNQQEQFISSGQVLSEREIQSPSSL 398
Query: 237 EKI--VFCNSSSFGSGT*SKITSC 172
+K+ F ++ + S K SC
Sbjct: 399 QKLSTFFQSNENIQSNVKQKQASC 422
>UniRef50_Q9ZCN2 Cluster: Uncharacterized protein RP691; n=19;
Rickettsia|Rep: Uncharacterized protein RP691 -
Rickettsia prowazekii
Length = 656
Score = 33.1 bits (72), Expect = 8.1
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = +2
Query: 284 EKIELLYENRKRRAVEIKNDPFIDFKNSPERRDKSWKIAPLPIRLQNRHLDLGDVSASNT 463
E + L EN+K + EIK ++ +K+S + R+ K+ + +L N +DL ++
Sbjct: 414 EIVPALIENKKFTSKEIKPYFYLLYKHSAQDRNTQIKLQTIYHKLTNEDIDLNNIKLDIN 473
Query: 464 AHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAF 562
++ + D C +RNQ LAF
Sbjct: 474 TYYGWKSVVMCSAMTTLILDYICFYFRNQELAF 506
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,421,713
Number of Sequences: 1657284
Number of extensions: 15189463
Number of successful extensions: 37278
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 35937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37246
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -