Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g07
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026209-2|AAN84883.1| 863|Caenorhabditis elegans Gex interacti... 95 5e-20
AF026209-1|AAB71278.2| 968|Caenorhabditis elegans Gex interacti... 95 5e-20
U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional gl... 95 7e-20
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 36 0.025
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 31 0.71
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 31 0.71
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 31 0.71
U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine r... 29 3.8
Z14092-1|CAA78468.2| 551|Caenorhabditis elegans Hypothetical pr... 29 5.0
AY090486-1|AAM11895.1| 551|Caenorhabditis elegans high-affinity... 29 5.0
Z81062-14|CAB02947.2| 362|Caenorhabditis elegans Hypothetical p... 28 6.6
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical... 28 6.6
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 8.7
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p... 28 8.7
AF099915-1|AAC68771.1| 460|Caenorhabditis elegans Hypothetical ... 28 8.7
>AF026209-2|AAN84883.1| 863|Caenorhabditis elegans Gex interacting
protein protein7, isoform b protein.
Length = 863
Score = 95.1 bits (226), Expect = 5e-20
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Frame = +2
Query: 230 IFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDP-FIDFKNSPE--RRDKSWKIA 400
I + + L F+ L+ F+ + L R + +I N F DF E R D+ WK A
Sbjct: 456 ILTPDALRFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 515
Query: 401 PLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 580
+P LQ+R +++ ++ + A+N DF+D + PTWRNQL N+ A
Sbjct: 516 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 573
Query: 581 VSGKLQGA-PLTITTCP------VLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHN 739
V + P T VL RPR W++ E ++LI + G L DF + ++HN
Sbjct: 574 VRNNISYTHPTTKKEYTLNEKHAVLKVRPRGWHLPEKHVLIHNQPTSGSLFDFGLFVFHN 633
Query: 740 ARKLYEANSGPYFLL 784
A+ L SGPYF L
Sbjct: 634 AKALIAQGSGPYFYL 648
>AF026209-1|AAB71278.2| 968|Caenorhabditis elegans Gex interacting
protein protein7, isoform a protein.
Length = 968
Score = 95.1 bits (226), Expect = 5e-20
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Frame = +2
Query: 230 IFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDP-FIDFKNSPE--RRDKSWKIA 400
I + + L F+ L+ F+ + L R + +I N F DF E R D+ WK A
Sbjct: 456 ILTPDALRFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 515
Query: 401 PLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 580
+P LQ+R +++ ++ + A+N DF+D + PTWRNQL N+ A
Sbjct: 516 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 573
Query: 581 VSGKLQGA-PLTITTCP------VLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHN 739
V + P T VL RPR W++ E ++LI + G L DF + ++HN
Sbjct: 574 VRNNISYTHPTTKKEYTLNEKHAVLKVRPRGWHLPEKHVLIHNQPTSGSLFDFGLFVFHN 633
Query: 740 ARKLYEANSGPYFLL 784
A+ L SGPYF L
Sbjct: 634 AKALIAQGSGPYFYL 648
>U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional
glyoxylate cycle proteinprotein.
Length = 1005
Score = 94.7 bits (225), Expect = 7e-20
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Frame = +2
Query: 230 IFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDP-FIDFKNSPE--RRDKSWKIA 400
I + + L F+ L+ F+ + L R + +I N F DF E R D+ WK A
Sbjct: 496 ILTPDALAFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 555
Query: 401 PLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 580
+P LQ+R +++ ++ + A+N DF+D + PTWRNQL N+ A
Sbjct: 556 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 613
Query: 581 VSGKLQGA-PLTITTCP------VLMFRPRAWNMIEHNILIDGKEAIGPLVDFAVLMYHN 739
V + P T VL RPR W++ E ++LI + G L DF + ++HN
Sbjct: 614 VRNNISYTHPTTKKEYTLNEKHAVLKVRPRGWHLPEKHVLIHNQPTSGSLFDFGLFVFHN 673
Query: 740 ARKLYEANSGPYFLL 784
A+ L SGPYF L
Sbjct: 674 AKALIAQGSGPYFYL 688
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical protein
K10G4.5 protein.
Length = 1251
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 407 PIRLQNRHLDLGDVSASNTAHFVVALNEDVQGI---QVDFDDGHCPTWRNQLLAFNNINL 577
PIR++NR D DV H + E + Q+ FDD H +QL++ + +NL
Sbjct: 841 PIRIKNR--DCMDVLCDEMKHILEKNPEKLNEFIVEQMGFDDEHLMRLHDQLVSISKVNL 898
Query: 578 AVSGKLQ 598
+GK+Q
Sbjct: 899 ITAGKVQ 905
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 31.5 bits (68), Expect = 0.71
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 206 KLEELQKTIFSSEVLEF-IAALHRNFDEKIELLYENRKRRAVEIKNDPFIDFKNSPERRD 382
KL L+K + S E + R++DEKI LY ++ IK D + DF+N ++
Sbjct: 1178 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK----IK-DEWDDFRNDADKEI 1232
Query: 383 KSWKIAPLPIRLQNRHLD 436
+ WK +R + + L+
Sbjct: 1233 QKWKTDAYTVRSEAKALE 1250
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 31.5 bits (68), Expect = 0.71
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 206 KLEELQKTIFSSEVLEF-IAALHRNFDEKIELLYENRKRRAVEIKNDPFIDFKNSPERRD 382
KL L+K + S E + R++DEKI LY ++ IK D + DF+N ++
Sbjct: 1251 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK----IK-DEWDDFRNDADKEI 1305
Query: 383 KSWKIAPLPIRLQNRHLD 436
+ WK +R + + L+
Sbjct: 1306 QKWKTDAYTVRSEAKALE 1323
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 31.5 bits (68), Expect = 0.71
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 206 KLEELQKTIFSSEVLEF-IAALHRNFDEKIELLYENRKRRAVEIKNDPFIDFKNSPERRD 382
KL L+K + S E + R++DEKI LY ++ IK D + DF+N ++
Sbjct: 1251 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK----IK-DEWDDFRNDADKEI 1305
Query: 383 KSWKIAPLPIRLQNRHLD 436
+ WK +R + + L+
Sbjct: 1306 QKWKTDAYTVRSEAKALE 1323
>U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical
protein ZC196.3 protein.
Length = 441
Score = 29.9 bits (64), Expect = 2.2
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Frame = +2
Query: 149 ENNYYIMVHDVILLQVPLPK-LEELQKTIFSSEVLEFIAALHRNFDEKIELLYENRKRRA 325
E++ + M+ D L+ +P+ LE+L+ IFSS +F D IEL +RK+
Sbjct: 83 ESSEFEMI-DTSSLEKYVPEVLEDLKYAIFSSNWTDFYFKYRSAVDTIIEL---SRKQGT 138
Query: 326 VEIK----NDPFIDFKNSPERRDKSWKIAPLPIRLQNRHLD 436
V+I N+ FK+ RR +K+ + + +NR +
Sbjct: 139 VDISIQIGNNSCESFKDRDFRRYTYYKLGNISEKPENREFE 179
>AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine
receptor, class z protein83 protein.
Length = 314
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 36 RYYFLRTRTIFRFECFNTTFNQVQLCRVSCCADYLLNKKIITTL 167
+Y F + T FE F F+ +QL SC +++ +++TL
Sbjct: 223 KYIFWQAVTALIFESFPIIFSTIQLLHGSCGCSFVVIATLVSTL 266
>Z14092-1|CAA78468.2| 551|Caenorhabditis elegans Hypothetical
protein R107.1 protein.
Length = 551
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 416 LQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAVSGKL 595
+Q + DLGDVS + FV + + G + D G P W + L N I+ +VSG L
Sbjct: 294 IQTMYEDLGDVSWGEKSVFVFFIL--LIGSWISRDPGFTPGWGDLLPHRNFISDSVSGVL 351
>AY090486-1|AAM11895.1| 551|Caenorhabditis elegans high-affinity
dicarboxylate transporterINDY3 protein.
Length = 551
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 416 LQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAVSGKL 595
+Q + DLGDVS + FV + + G + D G P W + L N I+ +VSG L
Sbjct: 294 IQTMYEDLGDVSWGEKSVFVFFIL--LIGSWISRDPGFTPGWGDLLPHRNFISDSVSGVL 351
>Z81062-14|CAB02947.2| 362|Caenorhabditis elegans Hypothetical
protein F15A4.3 protein.
Length = 362
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 580 SQIYVVESEKLIPPCWAVTVIKIYLDPLNILI 485
+ IY++ L+ CW IK++ D +NI++
Sbjct: 38 TSIYILTGYILVRICWIFLTIKVFHDNMNIMM 69
>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
protein F25G6.2 protein.
Length = 1143
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 614 ITTCPVLMFRPRAWNMIEHNILIDGKEA 697
I T PV+ +A+N++E ++ D KEA
Sbjct: 520 INTLPVIQKAKKAFNLVEEAVVFDDKEA 547
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -1
Query: 366 EFLKSIKGSFFISTARRFLFSYNNSIFSSKLRCRAAINSRTSLEKIVFCNSSSF 205
E ++++K ++ RRFL SY N SK R R + ++ E + +C S +F
Sbjct: 949 EIIENVKTIQLLTRTRRFLNSYEN---ESKKRKRTELR-KSVYEAVNYCISQNF 998
>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
protein F26G1.1 protein.
Length = 1021
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 182 ILLQVPLPKLEELQKTIFSSEVLEFIAALHRNFDEKIELLYENRKRRAVEIKNDPFI 352
IL+ + L ++ S +VL+ I ALH +F+E + L + A +N F+
Sbjct: 501 ILVSAVIEGLPSKYLSVHSEQVLDIIFALHEDFEEPLTRLGKRYLNMAPIEENRKFV 557
>AF099915-1|AAC68771.1| 460|Caenorhabditis elegans Hypothetical
protein E02H9.6 protein.
Length = 460
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/78 (21%), Positives = 41/78 (52%)
Frame = +2
Query: 149 ENNYYIMVHDVILLQVPLPKLEELQKTIFSSEVLEFIAALHRNFDEKIELLYENRKRRAV 328
+N YI + +L +PL LQ+T++S + + +++ D+ + ++ + +
Sbjct: 345 QNPIYIQI-PTLLCAIPLINGINLQRTVYSKIIYNLLCSIYHKKDKYL------KETKNL 397
Query: 329 EIKNDPFIDFKNSPERRD 382
E+KN +F+NS +++
Sbjct: 398 ELKNLNSKNFENSKIKKN 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,869,212
Number of Sequences: 27780
Number of extensions: 384067
Number of successful extensions: 924
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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