Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10g04
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.58 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.58 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   4.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.1  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   9.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.4  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 241 IKWQIRRPKVTPV-HLTVAQCFLRV 312
           +KWQ RR  +TP  H ++ Q F+ +
Sbjct: 128 LKWQTRRKILTPAFHFSILQQFVAI 152


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 241 IKWQIRRPKVTPV-HLTVAQCFLRV 312
           +KWQ RR  +TP  H ++ Q F+ +
Sbjct: 128 LKWQTRRKILTPAFHFSILQQFVAI 152


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 510 KIQALKKEKETLAHHYEREEE 572
           KI AL++E+ETL    +RE +
Sbjct: 345 KIVALRQEQETLKSQVQRESD 365


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +2

Query: 35  LWFSPTNNFLTLFLVKDLIVIVLDITKKNTIVISRK 142
           LW SPT + +  F +   ++ +L   K+  ++++ K
Sbjct: 563 LWASPTCDLMYEFQIFTFLMSLLQSIKRRYVLLNEK 598


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -2

Query: 100 HYYDQIFNKKQ 68
           H+YD++FN++Q
Sbjct: 2   HFYDKMFNQEQ 12


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 558 HSDVLMSLFLSLKPVF 511
           H D L +++ S+KPV+
Sbjct: 14  HHDTLHNIYTSMKPVY 29


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 558 HSDVLMSLFLSLKPVF 511
           H D L +++ S+KPV+
Sbjct: 14  HHDTLHNIYTSMKPVY 29


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 309 SEEALRHRQVNWSHFRTP 256
           + + + + + NWS+ RTP
Sbjct: 38  NSQMIDYSRPNWSYLRTP 55


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 309 SEEALRHRQVNWSHFRTP 256
           + + + + + NWS+ RTP
Sbjct: 58  NSQMIDYSRPNWSYLRTP 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,652
Number of Sequences: 336
Number of extensions: 2751
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)