Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g04
(683 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 0.51
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.67
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.67
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.67
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.67
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 25 0.89
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.2
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.2
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.2
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 24 1.6
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 2.1
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.1
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 2.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 4.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 4.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 6.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 6.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 6.3
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 8.3
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 8.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 8.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 8.3
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.4 bits (53), Expect = 0.51
Identities = 21/95 (22%), Positives = 42/95 (44%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++Q+ VL V ++ K + SLR + Q + + S + + +
Sbjct: 185 KINKIEEQDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNRE 244
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK+++ H E+ E+ L SRK +E+
Sbjct: 245 YRKKDRQYEKLHNEK-EKLLEERTSRKRYSRSRER 278
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.67
Identities = 15/71 (21%), Positives = 36/71 (50%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSR 596
++ NR R+ + ++E+++ +K + +E+E ++ ERE + SR
Sbjct: 6 RDRNREYRKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYR-EYRETSR 64
Query: 597 KLNQLRQEKCR 629
+ ++ R+E+ R
Sbjct: 65 ERSRDRKERER 75
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.67
Identities = 15/71 (21%), Positives = 36/71 (50%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSR 596
++ NR R+ + ++E+++ +K + +E+E ++ ERE + SR
Sbjct: 6 RDRNREYRKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYR-EYRETSR 64
Query: 597 KLNQLRQEKCR 629
+ ++ R+E+ R
Sbjct: 65 ERSRDRKERER 75
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.67
Identities = 15/71 (21%), Positives = 36/71 (50%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSR 596
++ NR R+ + ++E+++ +K + +E+E ++ ERE + SR
Sbjct: 6 RDRNREYRKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYR-EYRETSR 64
Query: 597 KLNQLRQEKCR 629
+ ++ R+E+ R
Sbjct: 65 ERSRDRKERER 75
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.67
Identities = 15/71 (21%), Positives = 36/71 (50%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSR 596
++ NR R+ + ++E+++ +K + +E+E ++ ERE + SR
Sbjct: 6 RDRNREYRKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYR-EYRETSR 64
Query: 597 KLNQLRQEKCR 629
+ ++ R+E+ R
Sbjct: 65 ERSRDRKERER 75
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 24.6 bits (51), Expect = 0.89
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Frame = -3
Query: 429 GFLLAKLSHEVCKYLTPLSKLYFVAVEIQFFSVVDHE-KQYS----EEALRHRQVNWSHF 265
G L K+ V + + +S L VA ++ + + H + Y+ + +R W
Sbjct: 110 GVSLCKIRAYVSEMSSYVSVLTIVAFSMERYLAICHPLRVYTISGLKRPIRFILAAWLIA 169
Query: 264 RTPNLPF--YDLVKLQNHPFARVTRTATKCQNSDLTINENYIFLREITIVFFLVISSTIT 91
+PF Y V L +P +A + LTI ++ TI+FFL I I
Sbjct: 170 LISAIPFAIYTKVNLVEYPPESGNYSADSAMCAMLTIYADFPLYELSTIIFFL-IPMLII 228
Query: 90 IKSLTRNSVK 61
+ TR +K
Sbjct: 229 LVVYTRMGLK 238
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/50 (22%), Positives = 24/50 (48%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYERE 566
++ NR R+ + +EE+ + +K + +E+E ++ ERE
Sbjct: 6 RDRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKNERE 55
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/50 (22%), Positives = 24/50 (48%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYERE 566
++ NR R+ + +EE+ + +K + +E+E ++ ERE
Sbjct: 6 RDRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKNERE 55
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/50 (22%), Positives = 24/50 (48%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYERE 566
++ NR R+ + +EE+ + +K + +E+E ++ ERE
Sbjct: 6 RDRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKNERE 55
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/50 (22%), Positives = 24/50 (48%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYERE 566
++ NR R+ + +EE+ + +K + +E+E ++ ERE
Sbjct: 6 RDRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKNERE 55
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.6
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V ++ + K + SLR + Q + + S + + +
Sbjct: 174 KINKIKEHDTVLVVNIEKSENESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNRE 233
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK+++ H E+ E+ L SRK +E+
Sbjct: 234 YRKKDRQYEKLHNEK-EKLLEERTSRKRYSRSRER 267
Score = 22.6 bits (46), Expect = 3.6
Identities = 13/73 (17%), Positives = 30/73 (41%)
Frame = +3
Query: 348 SLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALK 527
SL+ + + Y ++ NR R+ + ++E+ + +K +
Sbjct: 205 SLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRS 264
Query: 528 KEKETLAHHYERE 566
+E+E ++ ERE
Sbjct: 265 REREQKSYKNERE 277
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.1
Identities = 20/95 (21%), Positives = 41/95 (43%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V ++ K + SLR + Q + + S + + +
Sbjct: 174 KINKIEEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNRE 233
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK+++ H E+ E+ L SRK +E+
Sbjct: 234 YRKKDRQYEKLHNEK-EKLLEERTSRKRYSRSRER 267
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.1
Identities = 20/95 (21%), Positives = 41/95 (43%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V ++ K + SLR + Q + + S + + +
Sbjct: 185 KINKIEEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNRE 244
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK+++ H E+ E+ L SRK +E+
Sbjct: 245 YRKKDRQYEKLHNEK-EKLLEERTSRKRYSRSRER 278
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.1
Identities = 20/95 (21%), Positives = 41/95 (43%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V ++ K + SLR + Q + + S + + +
Sbjct: 174 KINKIEEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNRE 233
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK+++ H E+ E+ L SRK +E+
Sbjct: 234 YRKKDRQYEKLHNEK-EKLLEERTSRKRYSRSRER 267
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/73 (17%), Positives = 30/73 (41%)
Frame = +3
Query: 348 SLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALK 527
SL+ + + Y ++ NR R+ + ++E+++ K +
Sbjct: 216 SLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSHKRYSRS 275
Query: 528 KEKETLAHHYERE 566
+E+E ++ ERE
Sbjct: 276 REREQKSYKNERE 288
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.7
Identities = 13/73 (17%), Positives = 30/73 (41%)
Frame = +3
Query: 348 SLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALK 527
SL+ + + Y ++ NR R+ + ++E+ + +K +
Sbjct: 205 SLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRS 264
Query: 528 KEKETLAHHYERE 566
+E+E ++ ERE
Sbjct: 265 REREQNSYKNERE 277
Score = 21.8 bits (44), Expect = 6.3
Identities = 20/95 (21%), Positives = 40/95 (42%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V + K + SLR + Q + + S + + +
Sbjct: 174 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 233
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK+++ H E+ E+ L SRK +E+
Sbjct: 234 YRKKDRQYEKLHNEK-EKLLEERTSRKRYSRSRER 267
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.7
Identities = 13/73 (17%), Positives = 30/73 (41%)
Frame = +3
Query: 348 SLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALK 527
SL+ + + Y ++ NR R+ + ++E+ + +K +
Sbjct: 216 SLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRS 275
Query: 528 KEKETLAHHYERE 566
+E+E ++ ERE
Sbjct: 276 REREQNSYKNERE 288
Score = 21.8 bits (44), Expect = 6.3
Identities = 20/95 (21%), Positives = 40/95 (42%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V + K + SLR + Q + + S + + +
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK+++ H E+ E+ L SRK +E+
Sbjct: 245 YRKKDRQYEKLHNEK-EKLLEERTSRKRYSRSRER 278
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.7
Identities = 20/95 (21%), Positives = 41/95 (43%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V ++ K + SLR + Q + + S + + +
Sbjct: 185 KINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK+++ H E+ E+ L SRK +E+
Sbjct: 245 YRKKDRQYEKLHNEK-EKFLEERTSRKRYSRSRER 278
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.7
Identities = 20/95 (21%), Positives = 41/95 (43%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V ++ K + SLR + Q + + S + + +
Sbjct: 185 KINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK+++ H E+ E+ L SRK +E+
Sbjct: 245 YRKKDRQYEKLHNEK-EKFLEERTSRKRYSRSRER 278
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.3
Identities = 13/69 (18%), Positives = 33/69 (47%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSR 596
++ NR ++ + ++E+ + +K + +E+E ++ ERE + S+
Sbjct: 6 RDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNEREYR-KYRETSK 64
Query: 597 KLNQLRQEK 623
+ +Q R E+
Sbjct: 65 ERSQDRTER 73
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.3
Identities = 13/69 (18%), Positives = 33/69 (47%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSR 596
++ NR ++ + ++E+ + +K + +E+E ++ ERE + S+
Sbjct: 6 RDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNEREYR-KYRETSK 64
Query: 597 KLNQLRQEK 623
+ +Q R E+
Sbjct: 65 ERSQDRTER 73
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 6.3
Identities = 20/95 (21%), Positives = 40/95 (42%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V ++ K + SLR + Q + + S + + +
Sbjct: 185 KINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNRE 244
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK++ H E+ E+ L SRK +E+
Sbjct: 245 YRKKDRRYEKLHNEK-EKLLEERTSRKRYSRSRER 278
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 6.3
Identities = 20/95 (21%), Positives = 40/95 (42%)
Frame = +3
Query: 339 RIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 518
+I +++ + VL V ++ K + SLR + Q + + S + + +
Sbjct: 190 KINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNRE 249
Query: 519 ALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEK 623
KK++ H E+ E+ L SRK +E+
Sbjct: 250 YRKKDRRYEKLHNEK-EKLLEERTSRKRYSRSRER 283
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 44 SPTNNFLTLFLVKDLIVIVLDI 109
+PTN +L V DL+ ++L +
Sbjct: 66 TPTNYYLFNLAVSDLLFLILGL 87
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/50 (20%), Positives = 24/50 (48%)
Frame = +3
Query: 417 QEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYERE 566
++ NR R+ + ++E+ + +K + +E+E ++ ERE
Sbjct: 6 RDRNREYRKKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNERE 55
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/34 (23%), Positives = 17/34 (50%)
Frame = +1
Query: 238 VIKWQIRRPKVTPVHLTVAQCFLRVLFLVINYRK 339
+I W R P+ + + + FL+ L ++ R+
Sbjct: 317 IINWNFRGPRTHRMPQLIRKIFLKYLPTILMMRR 350
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.3
Identities = 16/94 (17%), Positives = 41/94 (43%)
Frame = +3
Query: 348 SLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALK 527
SL+ + + Y ++ NR ++ + ++E+ + +K +
Sbjct: 205 SLRSRTHGFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRS 264
Query: 528 KEKETLAHHYEREEECLTNDLSRKLNQLRQEKCR 629
+E+E ++ ERE + S++ ++ R+E+ R
Sbjct: 265 REREQNSYKNEREYR-KYRETSKERSRDRRERER 297
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,316
Number of Sequences: 438
Number of extensions: 3573
Number of successful extensions: 46
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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