Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10g02
         (728 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001962-1|AAH01962.1|  496|Homo sapiens exonuclease 3'-5' domai...    34   0.60 
AK001600-1|BAA91781.1|  496|Homo sapiens protein ( Homo sapiens ...    34   0.60 
DQ993201-1|ABJ97706.1|  921|Homo sapiens extended-synaptotagmin ...    30   7.4  
BC013957-1|AAH13957.1|  358|Homo sapiens FAM62B protein protein.       30   7.4  
AY368150-1|AAR89381.1|  893|Homo sapiens KIAA1228 protein protein.     30   7.4  
AK001181-1|BAA91539.1|  358|Homo sapiens protein ( Homo sapiens ...    30   7.4  
AJ303365-1|CAC33887.1|  158|Homo sapiens chr2 synaptotagmin prot...    30   7.4  
AB033054-1|BAA86542.2|  843|Homo sapiens KIAA1228 protein protein.     30   7.4  

>BC001962-1|AAH01962.1|  496|Homo sapiens exonuclease 3'-5'
           domain-like 2 protein.
          Length = 496

 Score = 33.9 bits (74), Expect = 0.60
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
 Frame = +3

Query: 411 PRTFQTIHTDGLIIKVLILCDECCKKELRDY---IKGENSFN-VAFKNCESILCRRISFQ 578
           PRT   I  DG I+KV + C E   K L+DY   ++G      +A +   ++LC  +S +
Sbjct: 24  PRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLK 83

Query: 579 TVLMT 593
           ++  T
Sbjct: 84  SLAET 88


>AK001600-1|BAA91781.1|  496|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10738 fis, clone NT2RP3001427, weakly similar to
           WERNER SYNDROME HELICASE HOMOLOG. ).
          Length = 496

 Score = 33.9 bits (74), Expect = 0.60
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
 Frame = +3

Query: 411 PRTFQTIHTDGLIIKVLILCDECCKKELRDY---IKGENSFN-VAFKNCESILCRRISFQ 578
           PRT   I  DG I+KV + C E   K L+DY   ++G      +A +   ++LC  +S +
Sbjct: 24  PRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLK 83

Query: 579 TVLMT 593
           ++  T
Sbjct: 84  SLAET 88


>DQ993201-1|ABJ97706.1|  921|Homo sapiens extended-synaptotagmin 2
           protein.
          Length = 921

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 105 KKKTPTLLESISKKISTTETFQRLRN-KNLTTLNKIKYDSELLLHYLYDDQQNK 263
           K+ TP++   IS  I+T E  QRLR  +N TTL +     ++ L   +  Q+NK
Sbjct: 750 KEPTPSIASDISLPIATQELRQRLRQLENGTTLGQSPL-GQIQLTIRHSSQRNK 802


>BC013957-1|AAH13957.1|  358|Homo sapiens FAM62B protein protein.
          Length = 358

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 105 KKKTPTLLESISKKISTTETFQRLRN-KNLTTLNKIKYDSELLLHYLYDDQQNK 263
           K+ TP++   IS  I+T E  QRLR  +N TTL +     ++ L   +  Q+NK
Sbjct: 187 KEPTPSIASDISLPIATQELRQRLRQLENGTTLGQSPL-GQIQLTIRHSSQRNK 239


>AY368150-1|AAR89381.1|  893|Homo sapiens KIAA1228 protein protein.
          Length = 893

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 105 KKKTPTLLESISKKISTTETFQRLRN-KNLTTLNKIKYDSELLLHYLYDDQQNK 263
           K+ TP++   IS  I+T E  QRLR  +N TTL +     ++ L   +  Q+NK
Sbjct: 722 KEPTPSIASDISLPIATQELRQRLRQLENGTTLGQSPL-GQIQLTIRHSSQRNK 774


>AK001181-1|BAA91539.1|  358|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10319 fis, clone NT2RM2000490, weakly similar to
           SYNAPTOTAGMIN. ).
          Length = 358

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 105 KKKTPTLLESISKKISTTETFQRLRN-KNLTTLNKIKYDSELLLHYLYDDQQNK 263
           K+ TP++   IS  I+T E  QRLR  +N TTL +     ++ L   +  Q+NK
Sbjct: 187 KEPTPSIASDISLPIATQELRQRLRQLENGTTLGQSPL-GQIQLTIRHSSQRNK 239


>AJ303365-1|CAC33887.1|  158|Homo sapiens chr2 synaptotagmin
           protein.
          Length = 158

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 105 KKKTPTLLESISKKISTTETFQRLRN-KNLTTLNKIKYDSELLLHYLYDDQQNK 263
           K+ TP++   IS  I+T E  QRLR  +N TTL +     ++ L   +  Q+NK
Sbjct: 4   KEPTPSIASDISLPIATQELRQRLRQLENGTTLGQSPL-GQIQLTIRHSSQRNK 56


>AB033054-1|BAA86542.2|  843|Homo sapiens KIAA1228 protein protein.
          Length = 843

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 105 KKKTPTLLESISKKISTTETFQRLRN-KNLTTLNKIKYDSELLLHYLYDDQQNK 263
           K+ TP++   IS  I+T E  QRLR  +N TTL +     ++ L   +  Q+NK
Sbjct: 672 KEPTPSIASDISLPIATQELRQRLRQLENGTTLGQSPL-GQIQLTIRHSSQRNK 724


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,610,403
Number of Sequences: 237096
Number of extensions: 1137960
Number of successful extensions: 2206
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2206
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)