Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10g01
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 279 TDHLIFICVTSFILKFF*YSISFICVYVY 193
           T HL+F CV   +L  + +  +FI   V+
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILFTVH 251


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 24  IVYVCTYLINYFCF*NGTSMV 86
           I+  C + IN +CF N  S +
Sbjct: 177 IISTCAFGINTYCFRNDNSEI 197


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/59 (20%), Positives = 27/59 (45%)
 Frame = +1

Query: 58   FVFKMVQAWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEK 234
            ++F+ V+    + +    ++ + K   +Y  +   F+K G      +I  Y  +GV E+
Sbjct: 1044 YLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQ 1102


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -3

Query: 306 LVIRKTFLGTDHLIFICVTSFILKFF*YSISFICVYVYFKIFN 178
           L++R  F+ T  +   C    + +F  Y      + V+F +FN
Sbjct: 492 LIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFN 534


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 461 VSTTGSLWTPITT*KQNVSSSVSRF 535
           +ST+  L+TP +T     +SSVS F
Sbjct: 31  ISTSNYLYTPSSTIDLYNTSSVSNF 55


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 461 VSTTGSLWTPITT*KQNVSSSVSRF 535
           +ST+  L+TP +T     +SSVS F
Sbjct: 31  ISTSNYLYTPSSTIDLYNTSSVSNF 55


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = -2

Query: 640 CQFYYIMLLLR-IRS---VVSQRSLSGTASHQPAYCKATKPAHR*RN 512
           C+ YY  L L+ IR    +   +S   + SHQPA     +PA   RN
Sbjct: 220 CEDYYGDLDLKSIRKSELLAGLQSSGSSRSHQPATKSKPRPAPASRN 266


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = -1

Query: 206 VSMFILKYSTPVLENKSSREIYSGGFLWCCSRWSVVSLSMYHACTILKTKII 51
           V+ F+L Y +  L + ++ ++      W   RW     ++ H    L T II
Sbjct: 6   VASFLLVYFSGALVSATTDKVVCYWGTWSTYRWGNGRFTVDHIDPYLCTHII 57


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 444 HVSLGHGNTDPLI 406
           HVS+ + NT+PL+
Sbjct: 60  HVSVSNTNTEPLL 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,549
Number of Sequences: 336
Number of extensions: 4463
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)