Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g01
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68116-3|CAA92175.1| 178|Caenorhabditis elegans Hypothetical pr... 129 2e-30
U80455-6|AAB37884.1| 159|Caenorhabditis elegans Hypothetical pr... 118 5e-27
U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical pr... 112 3e-25
U23529-1|AAK39160.1| 269|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 31 1.1
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 31 1.1
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 31 1.1
AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical... 29 2.5
AY305844-1|AAR11988.1| 423|Caenorhabditis elegans nuclear recep... 29 3.3
AF273828-1|AAG15177.1| 422|Caenorhabditis elegans nuclear recep... 29 3.3
AF273827-1|AAG15176.1| 421|Caenorhabditis elegans nuclear recep... 29 3.3
AF273826-1|AAG15175.1| 419|Caenorhabditis elegans nuclear recep... 29 3.3
AC024771-7|AAK70663.4| 407|Caenorhabditis elegans Nuclear hormo... 29 3.3
Z29115-3|CAA82361.1| 347|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical ... 28 5.7
Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical pr... 28 7.5
AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical... 28 7.5
AC006638-10|AAK85488.1| 242|Caenorhabditis elegans Hypothetical... 28 7.5
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 27 9.9
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF016657-12|AAB93656.1| 278|Caenorhabditis elegans Hypothetical... 27 9.9
>Z68116-3|CAA92175.1| 178|Caenorhabditis elegans Hypothetical
protein F42F12.4 protein.
Length = 178
Score = 129 bits (312), Expect = 2e-30
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Frame = +1
Query: 79 AWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNERGYT 258
A++M T + R + P + ++ + GVE K+N D L++L +
Sbjct: 2 AYFMTDVTKENRQDECRFSPNKEATEEDLLRIGVECTKVNFDDEHVQEDLDRLIKKYDMN 61
Query: 259 YEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQWIRIAVSKG 438
+ DE+ + +PN++EK+ F+ EHLH D E+R I G G+FDVR ++ WIRI V +G
Sbjct: 62 FHDEVHICRATMPNFDEKLDIFFEEHLHDDAELRVIKHGVGFFDVRTKDEAWIRIPVRRG 121
Query: 439 DMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPA--DEMPCRKDYVEKLQS 603
D + +P+GIYHRFT D + + A R F P W +NR A DE R+ Y+ + +
Sbjct: 122 DFVFLPAGIYHRFTTDPSEDVVALRLFRNNPKWTAFNRKADGDEQRVRQQYLNDISA 178
>U80455-6|AAB37884.1| 159|Caenorhabditis elegans Hypothetical
protein T01D1.4 protein.
Length = 159
Score = 118 bits (283), Expect = 5e-27
Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Frame = +1
Query: 73 VQAWYMDS-ETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINID-TYKTDGVLEKLKNE 246
+Q W+M+ D+RL HH PP+ I+ L GV+Y+K+++D T L +K E
Sbjct: 1 MQIWHMEPFPCGDRRLPHHVFPPKKITTTQLGQLAGVQYYKVDLDDTASMKKRLSAVKTE 60
Query: 247 RGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQWIRIA 426
+ T+ D S+ L +++K++ FY + ++ I +++G+ Y+DV +D WIR+
Sbjct: 61 KNVTFTDMFTVSETML-EFDDKMEQFYEPQVQKEDVISLVVEGTCYYDVEPEDDSWIRVQ 119
Query: 427 VSKGDMLVIPSGIYHRFTLDTNNYIKAKRFF 519
V KGD++VIP G+ HRFT N++K +RFF
Sbjct: 120 VEKGDLIVIPKGLSHRFTTTPQNFVKIQRFF 150
>U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical
protein K07E1.1 protein.
Length = 221
Score = 112 bits (269), Expect = 3e-25
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Frame = +1
Query: 58 FVFKMVQAWYMDSETT-DQRLQHHKNPPEYISLDDLFSKTGVEYFKIN-IDTYKTDGVLE 231
F KMVQ W M+ D RL HH PP+ I+ D+L +TG Y+K++ +D L
Sbjct: 60 FQLKMVQIWQMEPYPCGDPRLPHHLFPPKKITPDELSKRTGTLYWKLDTLDQVALAKRLT 119
Query: 232 KLKNERGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQ 411
LK E + ED E N+++KI+ + E E+ R I++G+ Y+DV D Q
Sbjct: 120 TLKLEHSFKKEDIFTLDAETTANFDDKIEELFEESSVPFEQARMIIEGTAYYDVEDKNGQ 179
Query: 412 WIRIAVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGE 528
W+RI GD+++IP+ RFT +N++K +RF+ E
Sbjct: 180 WVRIFCEYGDLILIPANTCFRFTTTPHNFVKMRRFYKDE 218
>U23529-1|AAK39160.1| 269|Caenorhabditis elegans Hypothetical
protein C15B12.2 protein.
Length = 269
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 147 NIFWRIFMVLQPLVRCFTIHVPCLYHFKNKNN 52
++FW I + LV + +PCLYH+ ++N
Sbjct: 60 HMFWYILTFITYLVWTLLLWIPCLYHYTCRHN 91
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 620 HNVIKLTFFFQRIYYILTFIYFSNKRI 700
H++ +LT FF ++YIL FSN R+
Sbjct: 142 HDLTRLTGFFAYVFYILFMFVFSNNRM 168
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 620 HNVIKLTFFFQRIYYILTFIYFSNKRI 700
H++ +LT FF ++YIL FSN R+
Sbjct: 142 HDLTRLTGFFAYVFYILFMFVFSNNRM 168
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 620 HNVIKLTFFFQRIYYILTFIYFSNKRI 700
H++ +LT FF ++YIL FSN R+
Sbjct: 142 HDLTRLTGFFAYVFYILFMFVFSNNRM 168
>AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical
protein Y37E3.17a protein.
Length = 830
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 625 IMLLLRIRSVVSQRSLSGTASHQPAYCKATKPAHR*RNVL 506
++LL R V S SGT+ H P A+ PAHR + +L
Sbjct: 54 VLLLERASGVASP---SGTSFHSPGLVSASHPAHRYKPIL 90
>AY305844-1|AAR11988.1| 423|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 423
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +1
Query: 445 LVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEKLQSGFSVAA* 624
L++PSG Y +DTNN K FF N P +E P D +EK F +
Sbjct: 263 LILPSGDY----IDTNNL---KSFF---------NIPDEEQPMTDDEIEKFCRMFKPSFE 306
Query: 625 CNKIDIFFPENILHINVYIFF 687
N+ + P I+V+ FF
Sbjct: 307 LNRRGLVLPMMAEKIDVFEFF 327
>AF273828-1|AAG15177.1| 422|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 422
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +1
Query: 445 LVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEKLQSGFSVAA* 624
L++PSG Y +DTNN K FF N P +E P D +EK F +
Sbjct: 262 LILPSGDY----IDTNNL---KSFF---------NIPDEEQPMTDDEIEKFCRMFKPSFE 305
Query: 625 CNKIDIFFPENILHINVYIFF 687
N+ + P I+V+ FF
Sbjct: 306 LNRRGLVLPMMAEKIDVFEFF 326
>AF273827-1|AAG15176.1| 421|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 421
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +1
Query: 445 LVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEKLQSGFSVAA* 624
L++PSG Y +DTNN K FF N P +E P D +EK F +
Sbjct: 261 LILPSGDY----IDTNNL---KSFF---------NIPDEEQPMTDDEIEKFCRMFKPSFE 304
Query: 625 CNKIDIFFPENILHINVYIFF 687
N+ + P I+V+ FF
Sbjct: 305 LNRRGLVLPMMAEKIDVFEFF 325
>AF273826-1|AAG15175.1| 419|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 419
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +1
Query: 445 LVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEKLQSGFSVAA* 624
L++PSG Y +DTNN K FF N P +E P D +EK F +
Sbjct: 259 LILPSGDY----IDTNNL---KSFF---------NIPDEEQPMTDDEIEKFCRMFKPSFE 302
Query: 625 CNKIDIFFPENILHINVYIFF 687
N+ + P I+V+ FF
Sbjct: 303 LNRRGLVLPMMAEKIDVFEFF 323
>AC024771-7|AAK70663.4| 407|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 86 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +1
Query: 445 LVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEKLQSGFSVAA* 624
L++PSG Y +DTNN K FF N P +E P D +EK F +
Sbjct: 247 LILPSGDY----IDTNNL---KSFF---------NIPDEEQPMTDDEIEKFCRMFKPSFE 290
Query: 625 CNKIDIFFPENILHINVYIFF 687
N+ + P I+V+ FF
Sbjct: 291 LNRRGLVLPMMAEKIDVFEFF 311
>Z29115-3|CAA82361.1| 347|Caenorhabditis elegans Hypothetical
protein T26G10.4 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 401 VRINGSVLPCPRETCWSSRAVSTTGSLWTP 490
++ G +PCPR T + VST LW+P
Sbjct: 150 IKDGGLGVPCPRVTNMVTFVVSTMKKLWSP 179
>AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical
protein Y32B12B.5 protein.
Length = 451
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 22 KLFTYVHI*LIIFVFKMVQAWYMDSETTDQRLQHHKNPPEYISLDD-LFSKTGVEYFKIN 198
+L TY H+ VF ++ AW E Q + H K+P + +D L + G+ F
Sbjct: 159 QLGTYRHLMCAFAVFSLIYAWI---EVFTQPVMHTKDPVFIVFMDSPLKYQAGIGNFVTC 215
Query: 199 IDTYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYE 306
+ V+ L + ++Y VC E LP +
Sbjct: 216 LYCGSFALVISLLAAQ--FSYRFIAVCRPEILPKLD 249
>Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical
protein T07C12.6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 267 IFICVTSFILKFF*YSISFICVYVYFKI 184
I + +T I FF + I+ +C+ VY KI
Sbjct: 30 IIVSITELIFYFFAFYINSVCLKVYLKI 57
>AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical
protein Y37E3.17b protein.
Length = 837
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 583 SLSGTASHQPAYCKATKPAHR*RNVL 506
S SGT+ H P A+ PAHR + +L
Sbjct: 72 SPSGTSFHSPGLVSASHPAHRYKPIL 97
>AC006638-10|AAK85488.1| 242|Caenorhabditis elegans Hypothetical
protein F41G4.8 protein.
Length = 242
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = +1
Query: 85 YMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNERGYTYE 264
Y+ S + Q + E +D+ + + +E + I Y T + N + + E
Sbjct: 7 YLLSAAVSCQFQDFEGSGEEALIDEYWLQRLIE--NVGIPHYLTQKAYQLTANAKEHVDE 64
Query: 265 DEMVCSKECLPNYEEKIKSFYTEHLHTD 348
DE++ +P+Y ++ F T+ L TD
Sbjct: 65 DEILTLDASVPDYARQV--FTTQVLSTD 90
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -3
Query: 561 ISRPIVRQPNRLTDEETFCFYVVIGVQSEPVVDTARDDQH 442
+ RPI+ Q +R+ D ++FC +V +Q + T + H
Sbjct: 166 VERPILYQVDRIRDGKSFCTRLVKALQDGEAIFTVQISFH 205
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/72 (23%), Positives = 38/72 (52%)
Frame = -1
Query: 692 YLKNI*TLICNIFSGKKMSILLHYAATENPLCSFST*SFRHGISSAGLL*GNQTGSPMKK 513
+LK++ T+ ++++G +S + +P+ ++ T +R+G + N TG P +
Sbjct: 1476 FLKDV-TVRLSLYAGNDLS------TSPSPIKTYCTEEYRNGFGPEQKIEQNSTGGPNRD 1528
Query: 512 RFAFM*LLVSKV 477
AF+ +SK+
Sbjct: 1529 HSAFVVFELSKI 1540
>AF016657-12|AAB93656.1| 278|Caenorhabditis elegans Hypothetical
protein C16C4.11 protein.
Length = 278
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 65 LKWYKHGTWIVKQRTSGC 118
+KW K GTWI R S C
Sbjct: 88 MKWTKRGTWIFLTRPSRC 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,389,409
Number of Sequences: 27780
Number of extensions: 406437
Number of successful extensions: 1133
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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