Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g01
(707 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14716.1 68417.m02263 iron-deficiency-responsive protein, put... 235 2e-62
At4g14710.1 68417.m02260 iron-deficiency-responsive protein, put... 235 3e-62
At5g43850.1 68418.m05361 acireductone dioxygenase (ARD/ARD') fam... 229 1e-60
At2g26400.1 68415.m03168 acireductone dioxygenase (ARD/ARD') fam... 222 2e-58
At3g22640.1 68416.m02858 cupin family protein contains similarit... 36 0.026
At5g13420.1 68418.m01545 transaldolase, putative similar to tran... 29 2.3
At1g34190.1 68414.m04241 no apical meristem (NAM) family protein... 29 2.3
At4g16430.1 68417.m02487 basic helix-loop-helix (bHLH) family pr... 29 3.0
At5g26700.1 68418.m03169 germin-like protein, putative similar t... 29 4.0
At5g61750.1 68418.m07748 cupin family protein similar to germin-... 28 5.3
At4g32300.1 68417.m04596 lectin protein kinase family protein co... 28 5.3
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 28 5.3
At5g35330.2 68418.m04188 methyl-CpG-binding domain-containing pr... 28 7.0
At5g35330.1 68418.m04187 methyl-CpG-binding domain-containing pr... 28 7.0
At2g07360.1 68415.m00843 SH3 domain-containing protein contains ... 28 7.0
At5g42090.1 68418.m05124 expressed protein 27 9.2
At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein si... 27 9.2
At3g22410.1 68416.m02827 expressed protein 27 9.2
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 27 9.2
>At4g14716.1 68417.m02263 iron-deficiency-responsive protein,
putative strong similarity to iron-deficiency induced
gene [Hordeum vulgare] GI:14522834; contains Pfam
profile PF03079: ARD/ARD' family
Length = 192
Score = 235 bits (575), Expect = 2e-62
Identities = 100/175 (57%), Positives = 134/175 (76%)
Frame = +1
Query: 67 KMVQAWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNE 246
+++QAWYMD DQRL HHK+P E++SLD L ++ GV ++++ D Y+TD L+K++
Sbjct: 11 EVIQAWYMDDSEEDQRLPHHKDPKEFVSLDKL-AELGVLSWRLDADNYETDEDLKKIRES 69
Query: 247 RGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQWIRIA 426
RGY+Y D E LPNYE K+KSF+ EHLHTDEEIR+ + G+GYFDVRD + WIR+
Sbjct: 70 RGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGTGYFDVRDRNEAWIRVL 129
Query: 427 VSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVE 591
V KG M+V+P+GIYHRFT+D++NYIKA R F+GEPVW PYNRP D +P RK+YV+
Sbjct: 130 VKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVD 184
>At4g14710.1 68417.m02260 iron-deficiency-responsive protein,
putative strong similarity to iron-deficiency induced
gene [Hordeum vulgare] GI:14522834; contains Pfam
profile PF03079: ARD/ARD' family
Length = 199
Score = 235 bits (574), Expect = 3e-62
Identities = 100/175 (57%), Positives = 134/175 (76%)
Frame = +1
Query: 67 KMVQAWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNE 246
+++QAWYMD DQRL HHK+P E++SLD L ++ GV ++++ D Y+TD L+K++
Sbjct: 11 EVIQAWYMDDSEEDQRLPHHKDPKEFLSLDKL-AELGVLSWRLDADNYETDEDLKKIRES 69
Query: 247 RGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQWIRIA 426
RGY+Y D E LPNYE K+KSF+ EHLHTDEEIR+ + GSGYFDVRD + WIR+
Sbjct: 70 RGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGSGYFDVRDRNEAWIRVW 129
Query: 427 VSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVE 591
V KG M+V+P+GIYHRFT+D++NYIKA R F+GEPVW PYNRP D +P RK+Y++
Sbjct: 130 VKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYID 184
>At5g43850.1 68418.m05361 acireductone dioxygenase (ARD/ARD') family
protein similar to iron-deficiency induced gene [Hordeum
vulgare] GI:14522834, SIPL [Homo sapiens] GI:16551383;
contains Pfam profile PF03079: ARD/ARD' family
Length = 187
Score = 229 bits (560), Expect = 1e-60
Identities = 99/179 (55%), Positives = 131/179 (73%)
Frame = +1
Query: 73 VQAWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNERG 252
++AW+MD DQRL HH+NP E +SLD L ++ GV Y+K+N + Y+ D L K++ +RG
Sbjct: 3 LEAWFMDDSNEDQRLPHHRNPKELVSLDYL-AELGVLYWKLNPENYENDSELSKIREDRG 61
Query: 253 YTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQWIRIAVS 432
Y Y D + E + NYEEK+K+F+TEH+H DEEIR+ L GSGYFDVRD +D+WIRI +
Sbjct: 62 YDYMDLLDLCPEKVSNYEEKLKNFFTEHIHKDEEIRYCLAGSGYFDVRDKDDRWIRIWMQ 121
Query: 433 KGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEKLQSGF 609
GD++V+P+GIYHRFTLD +NYIK R F+GEPVW PYNRP +E P RK Y+ L F
Sbjct: 122 PGDLIVLPAGIYHRFTLDASNYIKLMRLFVGEPVWTPYNRPQEEHPVRKKYIHGLTYKF 180
>At2g26400.1 68415.m03168 acireductone dioxygenase (ARD/ARD') family
protein similar to iron-deficiency induced gene [Hordeum
vulgare] GI:14522834, SIPL [Homo sapiens] GI:16551383;
contains Pfam profile PF03079: ARD/ARD' family
Length = 199
Score = 222 bits (543), Expect = 2e-58
Identities = 95/176 (53%), Positives = 132/176 (75%)
Frame = +1
Query: 67 KMVQAWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNE 246
+++QAWY+D++ DQ+L HHK+P E++SLD L ++ GV ++++ D Y+TD L++++
Sbjct: 11 EVIQAWYLDNKEEDQKLPHHKDPKEFVSLDKL-AELGVLCWRLDADNYETDEELKRIRES 69
Query: 247 RGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQWIRIA 426
RGY+Y D E LPNYEEK+K F+ EHLH DEEIR+ L GSGYFDVRD D WIR+
Sbjct: 70 RGYSYMDLCEVCPEKLPNYEEKVKMFFEEHLHIDEEIRYCLAGSGYFDVRDLNDIWIRVW 129
Query: 427 VSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEK 594
V KG ++V P+GIYHRFT+D++NY+KA R F+G PVW YNRP D +P RK Y++K
Sbjct: 130 VKKGGLIVFPAGIYHRFTVDSDNYMKAMRLFVGGPVWTAYNRPHDHLPARKAYMKK 185
>At3g22640.1 68416.m02858 cupin family protein contains similarity
to vicilin-like protein precursor [Juglans regia]
GI:6580762, vicilin precursor [Theobroma cacao]
PIR|S22477, vicilin precursor [Macadamia integrifolia]
GI:5852872
Length = 486
Score = 35.9 bits (79), Expect = 0.026
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +1
Query: 319 SFYTEHLHTDEEIRFI-LDGSGYFD-VRDGEDQWIRIAVSKGDMLVIPSGIYHRFTLDTN 492
+F+ H H D + FI L G G + V D + I +KGD++ IPSG+ + F +TN
Sbjct: 113 TFFVPH-HLDADAVFIVLQGKGVIEFVTDKTKESFHI--TKGDVVRIPSGVTN-FITNTN 168
Query: 493 NYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEKLQSGFSVAA*CNKIDIFFPENIL 663
+ + I PV P N D P + + +GF+ ++ PE +L
Sbjct: 169 QTVPLRLAQITVPVNNPGNY-KDYFPAASQFQQSYFNGFTKEVLSTSFNV--PEELL 222
>At5g13420.1 68418.m01545 transaldolase, putative similar to
transaldolase [Solanum tuberosum] gi|2078350|gb|AAB54016
Length = 438
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -1
Query: 269 SSSYV*PRSFLSFSSTPSVLYVSMFILKYSTPVLENKSSREIYSGG 132
SSS V PRSF++F + + L S L+Y+ + + S R SGG
Sbjct: 22 SSSSVLPRSFVNFRALNAKLSSSQLSLRYNQRSIPSLSVRCSVSGG 67
>At1g34190.1 68414.m04241 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) protein;
similar to NAM protein GI:6066595 [Petunia hybrida];
nam-like protein 9 (GI:21105746) [Petunia x hybrida];
NAC1 GI:7716952 [Medicago truncatula]
Length = 557
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 82 WYMDSETTDQ-RLQHHKNPPEYISLDDLFSKTG 177
W M T D+ L KNP EY +L LF K+G
Sbjct: 136 WVMHEYTMDEDELGRCKNPQEYYALYKLFKKSG 168
>At4g16430.1 68417.m02487 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 467
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 424 AVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVW 537
A++ DM + S +Y F DTN Y A + G+P+W
Sbjct: 132 ALTDLDMFYLAS-LYFSFRCDTNKYGPAGTYVSGKPLW 168
>At5g26700.1 68418.m03169 germin-like protein, putative similar to
germin-like protein GLP8 [SP|P93000]; contains Pfam
profile: PF01072 germin family
Length = 213
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 334 HLHTD-EEIRFILDGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYH 471
H+H EI F+L+G Y + I ++KGD+ P G+ H
Sbjct: 106 HVHPRASEIIFVLEGQLYVGFVTTAGKLIAKNLNKGDVFTFPKGLIH 152
>At5g61750.1 68418.m07748 cupin family protein similar to
germin-like protein from Mesembryanthemum crystallinum,
PIR:T12426 [SP|P45852], rhicadhesin receptor precursor
(Germin-like protein) from Pisum sativum [SP|Q9S8P4];
contains Pfam profile PF00190: Cupin
Length = 210
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 334 HLHT-DEEIRFILDGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYH 471
H H E+ F++ G + D ++ + + KGD+ V P G+ H
Sbjct: 106 HSHPRSSEMLFVVKGVVFAGFVDTNNKIFQTVLQKGDVFVFPKGLLH 152
>At4g32300.1 68417.m04596 lectin protein kinase family protein
contains Pfam domains, PF01453: Lectin (probable mannose
binding) and PF00069: Protein kinase domain
Length = 821
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 97 ETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNERGY 255
E D R+ H PE I LDD F+ ++ + T + V ++ RGY
Sbjct: 608 EDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGY 660
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 295 PNYEEKIKSFYTEHLHTDEEIRFILDGSG 381
P E I +TE+L EEIR +LD G
Sbjct: 49 PKIREAITQKFTEYLRRAEEIRAVLDEGG 77
>At5g35330.2 68418.m04188 methyl-CpG-binding domain-containing
protein similar to methyl-CpG binding protein MBD4 [Mus
musculus] GI:3800807; contains Pfam profile PF01429:
Methyl-CpG binding domain
Length = 272
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 448 VIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEK 594
V PSG R T++ Y+ +IGE V L P + DYV K
Sbjct: 152 VAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRK 200
>At5g35330.1 68418.m04187 methyl-CpG-binding domain-containing
protein similar to methyl-CpG binding protein MBD4 [Mus
musculus] GI:3800807; contains Pfam profile PF01429:
Methyl-CpG binding domain
Length = 272
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 448 VIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEK 594
V PSG R T++ Y+ +IGE V L P + DYV K
Sbjct: 152 VAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRK 200
>At2g07360.1 68415.m00843 SH3 domain-containing protein contains Pfam
profile PF00018: SH3 domain
Length = 1196
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = -3
Query: 510 FCF-----YVVIGVQSEPVVDTARDDQHVSLGHGNTDPLIL 403
FCF Y+ +G S ++DT R +++ G+TDP ++
Sbjct: 896 FCFIPRAKYLPLGPISAKLIDTYRTKHNITASTGSTDPAVV 936
>At5g42090.1 68418.m05124 expressed protein
Length = 439
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 599 RADSQ*QHNVIKLTFFFQRIYYILTFIYFSNKRIY 703
+ D + N++KLT F Q ++ +IYF+ +Y
Sbjct: 341 KTDGKAAVNLVKLTLFRQYYIVVICYIYFTRVVVY 375
>At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein
similar to alpha-glucosidase II from SP:Q9F234 [Bacillus
thermoamyloliquefaciens]; contains Pfam profile: PF01055
Glycosyl hydrolases family 31
Length = 991
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +1
Query: 37 VHI*LIIFVFKMVQAWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKT 216
VH+ L++ M+ AW MD E H K P E + +L S T E FK++++ K
Sbjct: 687 VHVQLLLGGGAMLDAWGMDGE-----FIHIKVPSE-SGISELIS-TSNERFKLHMENTKL 739
Query: 217 DGVLEKLKNERGYTYEDEMV 276
E + ++G E V
Sbjct: 740 IPEKEVVPGQKGMELSKEPV 759
>At3g22410.1 68416.m02827 expressed protein
Length = 400
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 211 KTDGVLEKLKNERGYTYEDEMVCSKECLPNY 303
K + VL +K + T++ E C++EC+ +
Sbjct: 7 KVEAVLRLVKKQSPLTFKQEKFCNRECVERF 37
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 522 DEETFCFYVVIG-VQSEPVVDTARDDQHVSLGHGNTDPLIL 403
DE+ C + +G + EP+ + DD+ S HGN + + L
Sbjct: 490 DEDDECVEIGLGSCEQEPIQERFGDDKDPSSDHGNVESIRL 530
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,153,251
Number of Sequences: 28952
Number of extensions: 368278
Number of successful extensions: 980
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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