Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10f24
         (735 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.       36   0.030
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated...    36   0.030
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated...    36   0.030
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated...    36   0.030
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated...    36   0.030
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated...    36   0.030
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr...    33   0.21 
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch...    33   0.21 
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    32   0.37 
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    32   0.37 
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    32   0.37 
Z69383-10|CAM06587.1|  222|Caenorhabditis elegans Hypothetical p...    32   0.48 
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z78018-2|CAB01447.1|  434|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p...    28   6.0  
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos...    28   6.0  
Z75546-7|CAA99895.1|  566|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
          Length = 6632

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 174  APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 326
            A  +    N +I KIDD T +L + +ADL +A    +   NE   A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866


>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
            protein 89, isoform e protein.
          Length = 5992

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 174  APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 326
            A  +    N +I KIDD T +L + +ADL +A    +   NE   A+ DA+
Sbjct: 4176 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4226


>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
            protein 89, isoform a protein.
          Length = 6632

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 174  APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 326
            A  +    N +I KIDD T +L + +ADL +A    +   NE   A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866


>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
            protein 89, isoform g protein.
          Length = 7122

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 174  APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 326
            A  +    N +I KIDD T +L + +ADL +A    +   NE   A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866


>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
            protein 89, isoform f protein.
          Length = 7441

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 174  APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 326
            A  +    N +I KIDD T +L + +ADL +A    +   NE   A+ DA+
Sbjct: 4176 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4226


>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
            protein 89, isoform b protein.
          Length = 8081

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 174  APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 326
            A  +    N +I KIDD T +L + +ADL +A    +   NE   A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866


>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 16/62 (25%), Positives = 32/62 (51%)
 Frame = +3

Query: 222  DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQ 401
            DL +++    A +  ANR  + F+NE+  A+R AE   ++ +N    +  LA  +  + +
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361

Query: 402  DV 407
             +
Sbjct: 1362 SI 1363


>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 16/62 (25%), Positives = 32/62 (51%)
 Frame = +3

Query: 222  DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQ 401
            DL +++    A +  ANR  + F+NE+  A+R AE   ++ +N    +  LA  +  + +
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361

Query: 402  DV 407
             +
Sbjct: 1362 SI 1363


>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
            protein.
          Length = 1947

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 16/62 (25%), Positives = 32/62 (51%)
 Frame = +3

Query: 222  DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQ 401
            DL +++    A +  ANR  + F+NE+  A+R AE   ++ +N    +  LA  +  + +
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361

Query: 402  DV 407
             +
Sbjct: 1362 SI 1363


>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
 Frame = +3

Query: 183  VEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRE 362
            +E+++ D +  +    Q+L     +LAE    L    NE+   +   +   +D + AR E
Sbjct: 2912 IEVESWDKL--VQHAMQRLQELERNLAECQLHLTSSENEIETMKAVEKIHLEDLKIAREE 2969

Query: 363  TAQLANRMADIA--QDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 536
            T Q++ R+ ++    D +   +   L   L + +    +   +  +  +L R+++   + 
Sbjct: 2970 TDQISKRIDEVRLFVDDVNDAAARLLAEDLKLDEHAKGQIEHVNKRYSTLKRAIRIRQAA 3029

Query: 537  DVIFSSDYVPNSMNVLNKVKEAIPRNKFKAKHNRITLLEDYTREE 671
                +SD+ P S + LN+    +P  +  +K N +    + T E+
Sbjct: 3030 VRNAASDFGPTSEHFLNQ-SVTLPWQRAISKSNLLPYYIEQTSEK 3073


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
 Frame = +3

Query: 183  VEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRE 362
            +E+++ D +  +    Q+L     +LAE    L    NE+   +   +   +D + AR E
Sbjct: 2912 IEVESWDKL--VQHAMQRLQELERNLAECQLHLTSSENEIETMKAVEKIHLEDLKIAREE 2969

Query: 363  TAQLANRMADIA--QDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 536
            T Q++ R+ ++    D +   +   L   L + +    +   +  +  +L R+++   + 
Sbjct: 2970 TDQISKRIDEVRLFVDDVNDAAARLLAEDLKLDEHAKGQIEHVNKRYSTLKRAIRIRQAA 3029

Query: 537  DVIFSSDYVPNSMNVLNKVKEAIPRNKFKAKHNRITLLEDYTREE 671
                +SD+ P S + LN+    +P  +  +K N +    + T E+
Sbjct: 3030 VRNAASDFGPTSEHFLNQ-SVTLPWQRAISKSNLLPYYIEQTSEK 3073


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
            protein.
          Length = 3674

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
 Frame = +3

Query: 183  VEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRE 362
            +E+++ D +  +    Q+L     +LAE    L    NE+   +   +   +D + AR E
Sbjct: 2912 IEVESWDKL--VQHAMQRLQELERNLAECQLHLTSSENEIETMKAVEKIHLEDLKIAREE 2969

Query: 363  TAQLANRMADIA--QDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 536
            T Q++ R+ ++    D +   +   L   L + +    +   +  +  +L R+++   + 
Sbjct: 2970 TDQISKRIDEVRLFVDDVNDAAARLLAEDLKLDEHAKGQIEHVNKRYSTLKRAIRIRQAA 3029

Query: 537  DVIFSSDYVPNSMNVLNKVKEAIPRNKFKAKHNRITLLEDYTREE 671
                +SD+ P S + LN+    +P  +  +K N +    + T E+
Sbjct: 3030 VRNAASDFGPTSEHFLNQ-SVTLPWQRAISKSNLLPYYIEQTSEK 3073


>Z69383-10|CAM06587.1|  222|Caenorhabditis elegans Hypothetical
           protein F13E9.14 protein.
          Length = 222

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +3

Query: 195 TNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETA--RQDCENARRETA 368
           T +V AK+++L Q +T    +L+    SL     E I+   D   A  +Q  E  R+E  
Sbjct: 124 TANVTAKLEELKQNVTSVLTNLSSVLNSL-----ETILENEDQTVAAQKQAIEELRQENP 178

Query: 369 QLANRMADIAQDVIAKP 419
           +  + +  IAQ+V  KP
Sbjct: 179 EEVDALFFIAQEVAPKP 195


>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
            F58G4.1 protein.
          Length = 1974

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +3

Query: 216  IDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADI 395
            +D+  +K     A++ ++ R     A E    R   E + +  E  +RE   LA  + DI
Sbjct: 1463 LDEWRRKCEALVAEVEQSQRETRAAATETFRLRNQLEESGEQTEAVKRENKALAQELKDI 1522

Query: 396  AQDV 407
            A  +
Sbjct: 1523 ADQL 1526


>U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical
           protein F33G12.5 protein.
          Length = 928

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/73 (24%), Positives = 36/73 (49%)
 Frame = +3

Query: 198 NDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLA 377
           N+ IA+ D L   LT  + +L  A R +      ++  + +   A+   ++  +ETA   
Sbjct: 197 NEAIAQKDSL---LTARHQELEGARREVASMQANLLNVQHERSEAQARVKSMIKETAAQE 253

Query: 378 NRMADIAQDVIAK 416
           NR++ + +D+  K
Sbjct: 254 NRISQLMKDIQMK 266


>AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical
           protein F09G2.4 protein.
          Length = 843

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 28/78 (35%), Positives = 33/78 (42%)
 Frame = +3

Query: 198 NDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLA 377
           ND + K +D    L V      E      L   +   A RDAE  R   E ARR+ AQ A
Sbjct: 376 NDGVLKHEDRLISLVVKKRVALEGEE---LLEYKRRKAERDAEETRLRMERARRQ-AQ-A 430

Query: 378 NRMADIAQDVIAKPSNPQ 431
           N   D   D IA P  P+
Sbjct: 431 NESDDSDDDDIAAPIVPR 448


>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
           protein F52C12.4 protein.
          Length = 1635

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 517 RLRPSDRFCGRRNANSLLPTSHTARLWHSCG 425
           RL+PS   CG RN   L P +  A ++ S G
Sbjct: 53  RLKPSSEECGLRNTQPLAPITDIAVIFPSLG 83


>Z78018-2|CAB01447.1|  434|Caenorhabditis elegans Hypothetical
           protein W07G4.2 protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 27/87 (31%), Positives = 37/87 (42%)
 Frame = +3

Query: 348 NARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRL 527
           N R  T        ++   VI   S+   C   A   +GN+ F         LG S ++L
Sbjct: 45  NDRNSTTNTLTSYENVQNSVICNFSDIN-CRLAAGMRLGNHIFEMAA----LLGMS-RQL 98

Query: 528 GSNDVIFSSDYVPNSMNVLNKVKEAIP 608
               + F  D     +N+LNKVKEAIP
Sbjct: 99  HRKSLFFVED--KTYLNMLNKVKEAIP 123


>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
            protein F20G4.3 protein.
          Length = 2003

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +3

Query: 174  APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVAR---RDAETARQDC 344
            A  V+ +  DV+A   ++ +K+   +  LAE   + +L   E  +A    RDAET     
Sbjct: 1437 AEDVQKELTDVVAATREMERKMRKFDQQLAEERNNTLLAQQERDMAHQMLRDAETKALVL 1496

Query: 345  ENARRETAQLANRM 386
             N   E   + +++
Sbjct: 1497 SNELSEKKDIVDQL 1510


>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
            F20G4.3 protein.
          Length = 2003

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +3

Query: 174  APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVAR---RDAETARQDC 344
            A  V+ +  DV+A   ++ +K+   +  LAE   + +L   E  +A    RDAET     
Sbjct: 1437 AEDVQKELTDVVAATREMERKMRKFDQQLAEERNNTLLAQQERDMAHQMLRDAETKALVL 1496

Query: 345  ENARRETAQLANRM 386
             N   E   + +++
Sbjct: 1497 SNELSEKKDIVDQL 1510


>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
            heavy chain II protein.
          Length = 2003

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +3

Query: 174  APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVAR---RDAETARQDC 344
            A  V+ +  DV+A   ++ +K+   +  LAE   + +L   E  +A    RDAET     
Sbjct: 1437 AEDVQKELTDVVAATREMERKMRKFDQQLAEERNNTLLAQQERDMAHQMLRDAETKALVL 1496

Query: 345  ENARRETAQLANRM 386
             N   E   + +++
Sbjct: 1497 SNELSEKKDIVDQL 1510


>Z75546-7|CAA99895.1|  566|Caenorhabditis elegans Hypothetical
           protein R05D11.8 protein.
          Length = 566

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 447 AVCDVGNNEFAFLRPQKRSLGRSLKRLGSN-DVIFSSDYVPNSMNVLNKVKEAIP 608
           +V D   N    + PQK + GRS K+  +N + +F     P+ + +  K     P
Sbjct: 111 SVPDSSRNRSVAVSPQKSAKGRSPKKFATNVEKLFEHHSTPSKLTLAKKQSRQSP 165


>Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical
           protein C14B1.6 protein.
          Length = 793

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 612 NKFKAKHNRITLLEDYTREELMNVIGSTMTDRQIARMNSLR 734
           N  + +     LL  YT EEL+ V G  + D QIA    +R
Sbjct: 523 NYDQKRRQNFGLLRYYTLEELIEVFGLLLPDVQIAMRRGVR 563


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,014,674
Number of Sequences: 27780
Number of extensions: 356341
Number of successful extensions: 1083
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)