Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10f23
         (455 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g20210.1 68417.m02954 terpene synthase/cyclase family protein...    28   3.4  
At5g53390.1 68418.m06634 expressed protein                             27   6.0  

>At4g20210.1 68417.m02954 terpene synthase/cyclase family protein
           (+)-delta-cadinene synthase isozyme XC14,
           Gossypiumarboreum, PIR2:S68366
          Length = 600

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +1

Query: 250 CCNGDCLAVVVL-DRNQLQNTDMEVLE-SLEYTSDNVELL 363
           C +GD   ++ L +  QL+ T   ++E +L +TS N+ELL
Sbjct: 188 CISGDAKGLLALYEAAQLRTTTEYIMEEALSFTSSNLELL 227


>At5g53390.1 68418.m06634 expressed protein
          Length = 486

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 451 FFNKIWYLFIHN-FLGNTCCNYQLSHILFCITI 356
           FFNKIW+LF+   F+     N  +  ++F +TI
Sbjct: 187 FFNKIWWLFVGLWFILRLLFNTFVDILMFALTI 219


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,387,397
Number of Sequences: 28952
Number of extensions: 215484
Number of successful extensions: 503
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 752336160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)