Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10f19
(467 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969L4 Cluster: U7 snRNA-associated Sm-like protein LSm... 85 7e-16
UniRef50_UPI0000DB6D99 Cluster: PREDICTED: similar to LSM10, U7 ... 83 4e-15
UniRef50_A7SC68 Cluster: Predicted protein; n=1; Nematostella ve... 81 1e-14
UniRef50_Q16J66 Cluster: Putative uncharacterized protein; n=2; ... 78 1e-13
UniRef50_Q4V4P5 Cluster: IP04234p; n=3; Sophophora|Rep: IP04234p... 73 3e-12
UniRef50_Q8MVI2 Cluster: U7 snRNP-specific SM-like protein; n=1;... 72 5e-12
UniRef50_UPI0000E480CE Cluster: PREDICTED: similar to LSM10, U7 ... 70 3e-11
UniRef50_A4RU45 Cluster: Predicted protein; n=1; Ostreococcus lu... 54 1e-06
UniRef50_Q9ES84 Cluster: SnRNP core protein SMX5d; n=12; Eukaryo... 53 4e-06
UniRef50_Q9Y333 Cluster: U6 snRNA-associated Sm-like protein LSm... 53 4e-06
UniRef50_UPI0000499249 Cluster: U6 snRNA-associated Sm-like prot... 51 1e-05
UniRef50_Q54F84 Cluster: Putative uncharacterized protein; n=1; ... 50 3e-05
UniRef50_A5DAN5 Cluster: Putative uncharacterized protein; n=1; ... 48 8e-05
UniRef50_Q4YPG0 Cluster: U6 snRNA-associated sm-like protein Lsm... 47 2e-04
UniRef50_Q4QBP1 Cluster: Small nuclear ribonucleoprotein, putati... 47 2e-04
UniRef50_Q7YWY5 Cluster: Putative uncharacterized protein; n=2; ... 46 5e-04
UniRef50_Q98S70 Cluster: Probable small nuclear ribonucleoprotei... 45 7e-04
UniRef50_Q54KX4 Cluster: LSM (Like-Sm) domain-containing protein... 45 0.001
UniRef50_A4VD81 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A0CSI7 Cluster: Chromosome undetermined scaffold_26, wh... 44 0.002
UniRef50_P38203 Cluster: U6 snRNA-associated Sm-like protein LSm... 44 0.002
UniRef50_UPI0000499737 Cluster: U6 snRNA-associated Sm-like prot... 44 0.002
UniRef50_Q9SY09 Cluster: Small nuclear riboprotein Sm-D1; n=9; E... 44 0.002
UniRef50_A0CX56 Cluster: Chromosome undetermined scaffold_3, who... 44 0.002
UniRef50_A2E4T4 Cluster: Putative uncharacterized protein; n=1; ... 43 0.003
UniRef50_Q5DHE3 Cluster: SJCHGC05980 protein; n=2; Schistosoma j... 43 0.004
UniRef50_A6S1F2 Cluster: Putative uncharacterized protein; n=3; ... 43 0.004
UniRef50_A2E8V8 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 42 0.005
UniRef50_Q4S130 Cluster: Chromosome 1 SCAF14770, whole genome sh... 42 0.009
UniRef50_A6S4U0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.009
UniRef50_P43321 Cluster: Small nuclear ribonucleoprotein Sm D3; ... 42 0.009
UniRef50_Q4MZK0 Cluster: U6 snRNA-associated protein, putative; ... 41 0.012
UniRef50_A1C7L1 Cluster: Small nuclear ribonucleoprotein (LSM2),... 41 0.012
UniRef50_Q9VU02 Cluster: Probable small nuclear ribonucleoprotei... 41 0.012
UniRef50_Q4CKU9 Cluster: U6 snRNA-associated Sm-like protein LSm... 41 0.016
UniRef50_A2FH88 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 40 0.021
UniRef50_Q10013 Cluster: Probable small nuclear ribonucleoprotei... 40 0.021
UniRef50_Q5KJW6 Cluster: Glycine rich protein, putative; n=2; Di... 40 0.027
UniRef50_A3LPF4 Cluster: Predicted protein; n=3; Saccharomycetac... 40 0.027
UniRef50_P62314 Cluster: Small nuclear ribonucleoprotein Sm D1; ... 40 0.027
UniRef50_Q9LGE6 Cluster: Probable U6 snRNA-associated Sm-like pr... 40 0.027
UniRef50_Q9QXA5 Cluster: U6 snRNA-associated Sm-like protein LSm... 40 0.027
UniRef50_Q1E7Q6 Cluster: Putative uncharacterized protein; n=1; ... 40 0.036
UniRef50_A4RMI1 Cluster: Putative uncharacterized protein; n=3; ... 40 0.036
UniRef50_A7AWX9 Cluster: U6 snRNA-associated Sm-like protein LSm... 39 0.047
UniRef50_Q9Y4Z0 Cluster: U6 snRNA-associated Sm-like protein LSm... 39 0.063
UniRef50_Q4UBR6 Cluster: U6 snrna-associated sm-like protein lsm... 38 0.083
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 38 0.083
UniRef50_Q8IIA8 Cluster: Small nuclear ribonucleoprotein D1, put... 38 0.11
UniRef50_Q5CYT7 Cluster: SnRNP core protein; n=1; Cryptosporidiu... 38 0.11
UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm... 38 0.11
UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole gen... 37 0.19
UniRef50_Q6CGF6 Cluster: Similar to tr|Q8IGS9 Drosophila melanog... 37 0.19
UniRef50_Q5NDZ9 Cluster: Putative snRNP; n=1; Sulfolobus neozeal... 37 0.25
UniRef50_Q96UG3 Cluster: Putative uncharacterized protein putati... 36 0.33
UniRef50_Q6BXY3 Cluster: Similar to sp|Q02260 Saccharomyces cere... 36 0.33
UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1; ... 36 0.33
UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.44
UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.44
UniRef50_UPI0000498C5A Cluster: small nuclear ribonucleoprotein;... 35 0.77
UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus ful... 35 1.0
UniRef50_Q06406 Cluster: U6 snRNA-associated Sm-like protein LSm... 33 2.4
UniRef50_A7RWE9 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.1
UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep: A... 33 3.1
UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm... 33 3.1
UniRef50_A4FX23 Cluster: Like-Sm ribonucleoprotein, core; n=4; M... 33 4.1
UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F, puta... 32 5.4
UniRef50_A0CT01 Cluster: Chromosome undetermined scaffold_266, w... 32 5.4
UniRef50_A0C2U8 Cluster: Chromosome undetermined scaffold_145, w... 32 5.4
UniRef50_Q751K2 Cluster: AGL296Wp; n=1; Eremothecium gossypii|Re... 32 5.4
UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2; T... 32 5.4
UniRef50_Q17348 Cluster: Small nuclear ribonucleoprotein Sm D3; ... 32 5.4
UniRef50_Q01CZ2 Cluster: Chromosome 03 contig 1, DNA sequence; n... 32 7.2
UniRef50_Q5DGC2 Cluster: SJCHGC05770 protein; n=1; Schistosoma j... 32 7.2
UniRef50_Q3MP95 Cluster: Putative uncharacterized protein CaJ7.s... 32 7.2
UniRef50_UPI0000499412 Cluster: U6 snRNA-associated Sm-like prot... 31 9.5
UniRef50_A1CHW9 Cluster: Small nuclear ribonucleoprotein SmD3, p... 31 9.5
>UniRef50_Q969L4 Cluster: U7 snRNA-associated Sm-like protein LSm10;
n=20; Euteleostomi|Rep: U7 snRNA-associated Sm-like
protein LSm10 - Homo sapiens (Human)
Length = 123
Score = 85.0 bits (201), Expect = 7e-16
Identities = 37/91 (40%), Positives = 60/91 (65%)
Frame = +1
Query: 145 QEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF 324
+E+ N+L+ ++ LQG+ TVDLR+++ G I+ VD FMNI Y D G++
Sbjct: 8 KERTISENSLIILLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTDRWGHQV 67
Query: 325 AFDNLFIHGRNIRYVHIPENMSLLSTIRHEV 417
D+LF+ GRN+RYVHIP+++++ STI ++
Sbjct: 68 KLDDLFVTGRNVRYVHIPDDVNITSTIEQQL 98
>UniRef50_UPI0000DB6D99 Cluster: PREDICTED: similar to LSM10, U7
small nuclear RNA associated; n=1; Apis mellifera|Rep:
PREDICTED: similar to LSM10, U7 small nuclear RNA
associated - Apis mellifera
Length = 91
Score = 82.6 bits (195), Expect = 4e-15
Identities = 32/83 (38%), Positives = 55/83 (66%)
Frame = +1
Query: 145 QEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF 324
+E++FY N+L ++ +++ +DLRN+ V G++E D +MNI K+ I+ DP+G+ +
Sbjct: 7 EERYFYFNSLAILLKAVENVRTIIDLRNEASVYGIVEHADAYMNIVMKDCIFIDPRGDSY 66
Query: 325 AFDNLFIHGRNIRYVHIPENMSL 393
+D F+ RNIR+VHIP + L
Sbjct: 67 NYDMFFVQARNIRFVHIPPKVFL 89
>UniRef50_A7SC68 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 114
Score = 81.0 bits (191), Expect = 1e-14
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = +1
Query: 145 QEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF 324
+E+ +L+C++ ++QG N TV+LRN++Y+ G IE VDGFMNI K+ + G
Sbjct: 4 RERAIAERSLVCLIKAVQGYNTTVELRNESYLEGFIEHVDGFMNIKMKDVKFVKASGEVD 63
Query: 325 AFDNLFIHGRNIRYVHIPENMSLLSTIRHEVSK 423
+F+ G IRYVHIP+ + + I E+ K
Sbjct: 64 NLPAMFVVGTQIRYVHIPDEIDMRKAIEQELGK 96
>UniRef50_Q16J66 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 141
Score = 77.8 bits (183), Expect = 1e-13
Identities = 33/94 (35%), Positives = 56/94 (59%)
Frame = +1
Query: 145 QEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF 324
+E++ N L +V L +N+ +DLRN++ V G I VDGFMNIS +N + D G F
Sbjct: 8 KERYNTLNELAGLVQCLVNRNILIDLRNESSVAGKITNVDGFMNISMENVVLIDQLGKHF 67
Query: 325 AFDNLFIHGRNIRYVHIPENMSLLSTIRHEVSKK 426
+ I+ R +RY+HIPE++ ++ + + ++
Sbjct: 68 RMEEFMIYPRYVRYIHIPESIEIVPALEEHIKRE 101
>UniRef50_Q4V4P5 Cluster: IP04234p; n=3; Sophophora|Rep: IP04234p -
Drosophila melanogaster (Fruit fly)
Length = 156
Score = 72.9 bits (171), Expect = 3e-12
Identities = 32/93 (34%), Positives = 51/93 (54%)
Frame = +1
Query: 145 QEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF 324
+EK+ NTL C LQG +V +DL N+T V G+I++ DG M +A++ D G +
Sbjct: 17 REKYLVSNTLNCWPVMLQGHSVLIDLHNETSVAGIIDVADGHMTCELTHAVFIDRNGGQH 76
Query: 325 AFDNLFIHGRNIRYVHIPENMSLLSTIRHEVSK 423
FD+ + R IR +HIP + +R + +
Sbjct: 77 PFDHFMVRNRMIRQIHIPSYLDAEQELRSAMER 109
>UniRef50_Q8MVI2 Cluster: U7 snRNP-specific SM-like protein; n=1;
Boltenia villosa|Rep: U7 snRNP-specific SM-like protein
- Boltenia villosa
Length = 100
Score = 72.1 bits (169), Expect = 5e-12
Identities = 29/94 (30%), Positives = 58/94 (61%)
Frame = +1
Query: 145 QEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF 324
+E+FF +NTL ++ ++GK +TV+++NDT + G + VDGFMN+ K A G
Sbjct: 6 KERFFKYNTLAILLCGMEGKLITVEMKNDTTITGTLXCVDGFMNMFMKKAKISSCNGTSM 65
Query: 325 AFDNLFIHGRNIRYVHIPENMSLLSTIRHEVSKK 426
+ + + + N RY+ +P +++ ++ IR +++ +
Sbjct: 66 SAERIHVKASNTRYIMLPNDVNPVTAIRQQLNNQ 99
>UniRef50_UPI0000E480CE Cluster: PREDICTED: similar to LSM10, U7
small nuclear RNA associated; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to LSM10, U7 small
nuclear RNA associated - Strongylocentrotus purpuratus
Length = 124
Score = 69.7 bits (163), Expect = 3e-11
Identities = 27/91 (29%), Positives = 58/91 (63%)
Frame = +1
Query: 145 QEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF 324
+EK+ +T++C++ ++ G+ TV+LRN+ G + VDGFMN++ ++ + G +
Sbjct: 8 REKYKSKHTMVCLLRAVVGRITTVELRNECSATGYVVDVDGFMNVTMSKVLFVNMDGEKT 67
Query: 325 AFDNLFIHGRNIRYVHIPENMSLLSTIRHEV 417
D++FI +RYV IP++++++ ++ E+
Sbjct: 68 HMDSIFIQASLVRYVQIPDDINMVKAMKKEL 98
>UniRef50_A4RU45 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 123
Score = 54.4 bits (125), Expect = 1e-06
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +1
Query: 169 TLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIH 348
+L+C + +L G V ++ R+D + G +E D M+ + NAI P+G++ + +F+
Sbjct: 11 SLVCFIQALVGTTVVIECRDDVALRGHLEQCDEGMHCTLTNAIRVTPEGHKTKLERVFVR 70
Query: 349 GRNIRYVHIPENMSLLSTIRHE 414
R IRYVH + L I +
Sbjct: 71 ARMIRYVHFAPTIDPLELIEQK 92
>UniRef50_Q9ES84 Cluster: SnRNP core protein SMX5d; n=12;
Eukaryota|Rep: SnRNP core protein SMX5d - Mus musculus
(Mouse)
Length = 119
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQ--GNEFAFDNLFIHGRNIR 363
SL GK+V V+L+ND +CG + VD ++NI + DP+ + + N FI G +R
Sbjct: 33 SLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVR 92
Query: 364 YVHIP 378
YV +P
Sbjct: 93 YVQLP 97
>UniRef50_Q9Y333 Cluster: U6 snRNA-associated Sm-like protein LSm2;
n=31; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm2 - Homo sapiens (Human)
Length = 95
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQ--GNEFAFDNLFIHGRNIR 363
SL GK+V V+L+ND +CG + VD ++NI + DP+ + + N FI G +R
Sbjct: 9 SLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVR 68
Query: 364 YVHIP 378
YV +P
Sbjct: 69 YVQLP 73
>UniRef50_UPI0000499249 Cluster: U6 snRNA-associated Sm-like protein
LSm4; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U6
snRNA-associated Sm-like protein LSm4 - Entamoeba
histolytica HM-1:IMSS
Length = 81
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +1
Query: 181 VVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNI 360
++ + QG +VT++L+N G+++ D MNI KNAI P G+ F+ L + G +I
Sbjct: 7 LLENSQGTSVTLELKNGFKYTGILDRCDRMMNIHLKNAILIKPSGDRFSVSKLIVKGISI 66
Query: 361 RYVHIPENM 387
R + E++
Sbjct: 67 RCFSVDESL 75
>UniRef50_Q54F84 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 137
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 169 TLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQ---GNEFAFDNL 339
+LLCV +L+G +T+ LR++ + G I VD ++NI +A + + + +
Sbjct: 30 SLLCVFTALRGTQITIQLRSNCEIYGTITNVDAYLNIELSDAKLTNTRYKNKRDEHVQEI 89
Query: 340 FIHGRNIRYVHIPENMSLLSTI 405
I RNIR++ IP+ + L S +
Sbjct: 90 LIQSRNIRFIQIPDKIDLNSLL 111
>UniRef50_A5DAN5 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 195
Score = 48.4 bits (110), Expect = 8e-05
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYC--DPQGNEFAFDNLFIHGRNIR 363
+L + VTV+L+ND + G ++ VD ++N+ N I D + + NLFI G +R
Sbjct: 9 TLVDQEVTVELKNDIEIRGTLKTVDQYLNLKLDNVICLNEDKYPHMQSVKNLFIRGSTVR 68
Query: 364 YVHIPENMSLLSTIRHEVSKK 426
YVH+ N ++ T+ + S++
Sbjct: 69 YVHMSSN-TVDCTLLQDASRR 88
>UniRef50_Q4YPG0 Cluster: U6 snRNA-associated sm-like protein Lsm2,
putative; n=5; Plasmodium (Vinckeia)|Rep: U6
snRNA-associated sm-like protein Lsm2, putative -
Plasmodium berghei
Length = 125
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 196 QGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQ--GNEFAFDNLFIHGRNIRYV 369
+ +++T++L+ND + G++ VD ++NI N +P+ + + F+ G +RYV
Sbjct: 34 KNQHITIELKNDLQISGVLHSVDQYLNIKLTNISVNNPEKYPHLLSIKTCFVRGSVVRYV 93
Query: 370 HIPENMSLLSTIRH 411
+P N + +RH
Sbjct: 94 FLPSNEVNIEKLRH 107
>UniRef50_Q4QBP1 Cluster: Small nuclear ribonucleoprotein, putative;
n=5; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 103
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +1
Query: 169 TLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIH 348
TL+ + L+G V ++L+N + V G I VD MN +A N + +
Sbjct: 12 TLITFLQQLRGTLVEIELKNASIVSGEIAYVDANMNTYMSHAKITSKGKNPVEVEEYMVR 71
Query: 349 GRNIRYVHIPENMSLLSTIRHEVSKK 426
G IRY+ +PE+++ ++ +KK
Sbjct: 72 GSTIRYIIMPESLNTYDILKQASTKK 97
>UniRef50_Q7YWY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 122
Score = 45.6 bits (103), Expect = 5e-04
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 181 VVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNA-IYCDPQGNEFAFDNLFIHGRN 357
V+ + GK V V+LRND YV G++E D ++I + A I D Q E + G++
Sbjct: 17 VLQGMAGKKVFVELRNDVYVIGILESCDSNLDIRIQYATIIRDAQKTE--EPEYLVIGKH 74
Query: 358 IRYVHIPENMSLLSTIR 408
+R+VH + ++ IR
Sbjct: 75 VRFVHFEHQVVPIAAIR 91
>UniRef50_Q98S70 Cluster: Probable small nuclear ribonucleoprotein
D1; n=1; Guillardia theta|Rep: Probable small nuclear
ribonucleoprotein D1 - Guillardia theta (Cryptomonas
phi)
Length = 77
Score = 45.2 bits (102), Expect = 7e-04
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +1
Query: 184 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIR 363
+ L+G+ + ++L+N+ + G+I VD MN+ N D G +F NL I NIR
Sbjct: 7 IKQLKGEEIIIELKNNIIIMGVIVNVDKNMNLKVSNISDIDIDGQKFFKGNLSIRFNNIR 66
Query: 364 YVHIPENMSL 393
+ +P + L
Sbjct: 67 IMVLPSKIEL 76
>UniRef50_Q54KX4 Cluster: LSM (Like-Sm) domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm)
domain-containing protein - Dictyostelium discoideum AX4
Length = 177
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L ++ + QG + V+L+N GL+ D +MNI+ KN I ++F + +I G
Sbjct: 4 LSLLRTGQGHQIMVELKNGETYNGLLVNCDNWMNINLKNVIRTSKDSDKFWKIQSCYIRG 63
Query: 352 RNIRYVHIPENM 387
I+Y+ +P+ +
Sbjct: 64 NTIKYISVPDEI 75
>UniRef50_A4VD81 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 171
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 208 VTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFA-FDNLFIHGRNIRYVHIPEN 384
+TV+L+ND + G I VDG N++F D + + A F N FI G ++RYVH+ +
Sbjct: 94 ITVELKNDVKIKGKITYVDG--NMNFNLVDIQDQETVQLANFKNCFIRGSSVRYVHLEKE 151
Query: 385 MSLLSTIRHEVSKKF 429
+ I+ K+F
Sbjct: 152 DIDVELIQEACLKEF 166
>UniRef50_A0CSI7 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 128
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLR-NDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIH 348
L ++ + +G +V ++++ DTY G +EL+D FMN+ N + GN F L I
Sbjct: 7 LSLLLTAKGSDVVIEVKAGDTYD-GKLELLDKFMNVKLTNVKHTSKDGNSFHGIKELLIK 65
Query: 349 GRNIRYVHIPENMSLLSTIRHEVSKKFYKPHMKQLTEKK 465
G +I+Y + + + E+ ++ + ++L E+K
Sbjct: 66 GNSIKYFRLNPDAEKKAQEEAEIYEQQQQQKQQKLNEQK 104
>UniRef50_P38203 Cluster: U6 snRNA-associated Sm-like protein LSm2;
n=28; Fungi/Metazoa group|Rep: U6 snRNA-associated
Sm-like protein LSm2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 95
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF--AFDNLFIHGRNIR 363
+L + V V+L+ND + G ++ VD F+N+ N D + + N+FI G +R
Sbjct: 9 TLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIRGSTVR 68
Query: 364 YVHIPENM 387
YV++ +NM
Sbjct: 69 YVYLNKNM 76
>UniRef50_UPI0000499737 Cluster: U6 snRNA-associated Sm-like protein
LSm2; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U6
snRNA-associated Sm-like protein LSm2 - Entamoeba
histolytica HM-1:IMSS
Length = 96
Score = 43.6 bits (98), Expect = 0.002
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCD----PQGNEFAFDNLFIHGRN 357
+L GK V V+L+ND + G + VD +NI N + CD PQ + FI G
Sbjct: 9 TLIGKEVVVELKNDVIITGTLIAVDQMLNIKLNN-LKCDATLFPQIQ--TMTDCFIRGNT 65
Query: 358 IRYVHIPEN 384
IRYV + EN
Sbjct: 66 IRYVSMAEN 74
>UniRef50_Q9SY09 Cluster: Small nuclear riboprotein Sm-D1; n=9;
Eukaryota|Rep: Small nuclear riboprotein Sm-D1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 116
Score = 43.6 bits (98), Expect = 0.002
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 193 LQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQG-NEFAFDNLFIHGRNIRYV 369
L + V+++L+N T V G I VD MN K A+ +G N D+L + G NIRY
Sbjct: 10 LNNETVSIELKNGTIVHGTITGVDVSMNTHLK-AVKLTLKGKNPVTLDHLSVRGNNIRYY 68
Query: 370 HIPENMSL 393
+P++++L
Sbjct: 69 ILPDSLNL 76
>UniRef50_A0CX56 Cluster: Chromosome undetermined scaffold_3, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_3,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 100
Score = 43.6 bits (98), Expect = 0.002
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 205 NVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDP--QGNEFAFDNLFIHGRNIRYVHIP 378
+VT++L+N + G I VD +N + + DP Q N FI G ++YVHIP
Sbjct: 19 SVTIELKNGLQIQGQITYVDDNLNFNLVDPEVSDPLKQPQLMTLRNSFIRGSTVKYVHIP 78
Query: 379 ----ENMSLLSTIRHEVSKK 426
+ L+S ++EV K+
Sbjct: 79 QEELQEEVLISACKNEVKKQ 98
>UniRef50_A2E4T4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 111
Score = 43.2 bits (97), Expect = 0.003
Identities = 28/97 (28%), Positives = 48/97 (49%)
Frame = +1
Query: 172 LLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHG 351
L+ + L + VTV+L+++T + G + VD MN + P E +NL I G
Sbjct: 3 LVHFLRKLVRETVTVELKDNTVIKGTVVGVDSAMNTHLRLVHIKAPGQEEKRLENLTIRG 62
Query: 352 RNIRYVHIPENMSLLSTIRHEVSKKFYKPHMKQLTEK 462
+IRYV +P+ ++L + + + K H + EK
Sbjct: 63 ASIRYVILPDVLNLDTLLVDDSPTKTRMRHGEAKEEK 99
>UniRef50_Q5DHE3 Cluster: SJCHGC05980 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC05980 protein - Schistosoma
japonicum (Blood fluke)
Length = 207
Score = 42.7 bits (96), Expect = 0.004
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYC-DPQG---NEF-AFDNLFIHGR 354
+L G+ +TV L ++T + G + DG MNI + + +P NEF + + I G+
Sbjct: 30 ALIGEPITVTLLDETRITGRLCSCDGMMNIQLDSGVIIRNPNSDRLNEFIQVETIMIFGQ 89
Query: 355 NIRYVHIPENMSLLSTI 405
IRYV +P+++ + ST+
Sbjct: 90 RIRYVTVPKSIDIPSTL 106
>UniRef50_A6S1F2 Cluster: Putative uncharacterized protein; n=3;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 690
Score = 42.7 bits (96), Expect = 0.004
Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFA-FDNLFIHG 351
L ++ + QG + V+L++ + G + D +MN++ K + P G++F +++ G
Sbjct: 5 LGLLTAAQGHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPEIYVKG 64
Query: 352 RNIRYVHIPENM 387
NI+Y+ +P+ +
Sbjct: 65 NNIKYLRMPDEI 76
>UniRef50_A2E8V8 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 112
Score = 42.3 bits (95), Expect = 0.005
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +1
Query: 208 VTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVHIPE-- 381
V + L G ++ V+ MN N ++ G + FD ++ G NI Y +PE
Sbjct: 18 VEIHLNTGDSYRGTLKYVEDNMNCWLTNVVHTQKDGQQIKFDKTYVRGSNILYFDLPEML 77
Query: 382 -NMSLLSTIRHEVSKKF 429
N L T EV KK+
Sbjct: 78 LNARLFKTGETEVKKKY 94
>UniRef50_Q4S130 Cluster: Chromosome 1 SCAF14770, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF14770, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 135
Score = 41.5 bits (93), Expect = 0.009
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQ 312
SL GK+V V+L+ND +CG + VD ++NI + DP+
Sbjct: 9 SLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPE 49
>UniRef50_A6S4U0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 157
Score = 41.5 bits (93), Expect = 0.009
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCD--PQGNEFAFDNLFIHGRNIR 363
+L VTV+L+ND + G+++ VD ++NI + + + + N+FI G +R
Sbjct: 68 TLVDHEVTVELKNDIQIKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNVFIRGSVVR 127
Query: 364 YVHIP 378
YVH+P
Sbjct: 128 YVHLP 132
>UniRef50_P43321 Cluster: Small nuclear ribonucleoprotein Sm D3;
n=11; Saccharomycetales|Rep: Small nuclear
ribonucleoprotein Sm D3 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 101
Score = 41.5 bits (93), Expect = 0.009
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 181 VVNSLQGKNVTVDLRND-TYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRN 357
++N QG V+++L TY L+E D MN+ ++ I +PQG D +F+ G
Sbjct: 10 LLNEAQGHIVSLELTTGATYRGKLVESEDS-MNVQLRDVIATEPQGAVTHMDQIFVRGSQ 68
Query: 358 IRYVHIPE 381
I+++ +P+
Sbjct: 69 IKFIVVPD 76
>UniRef50_Q4MZK0 Cluster: U6 snRNA-associated protein, putative;
n=1; Theileria parva|Rep: U6 snRNA-associated protein,
putative - Theileria parva
Length = 141
Score = 41.1 bits (92), Expect = 0.012
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L ++ + + + ++L+N G+++ D FMN+ N + G +F D FI G
Sbjct: 5 LTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVNVVCTSKSGTDFWKLDECFIRG 64
Query: 352 RNIRYVHIPENMSLLSTIRHEVSKKFYKPHMKQL 453
++ + +P ++ ++ + +K K H K L
Sbjct: 65 NTVKSLRLPNEVAEIAK-EEKRPRKTRKNHYKSL 97
>UniRef50_A1C7L1 Cluster: Small nuclear ribonucleoprotein (LSM2),
putative; n=5; Fungi/Metazoa group|Rep: Small nuclear
ribonucleoprotein (LSM2), putative - Aspergillus
clavatus
Length = 98
Score = 41.1 bits (92), Expect = 0.012
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFK--NAIYCDPQGNEFAFDNLFIHGRNIR 363
+L + VT++L+ND + G ++ VD ++NI + + D + + N+FI G +R
Sbjct: 9 TLTNQTVTIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNMFIRGSVVR 68
Query: 364 YVHIPEN 384
YV +P +
Sbjct: 69 YVMLPRS 75
>UniRef50_Q9VU02 Cluster: Probable small nuclear ribonucleoprotein
Sm D1; n=20; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein Sm D1 - Drosophila melanogaster (Fruit
fly)
Length = 124
Score = 41.1 bits (92), Expect = 0.012
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +1
Query: 193 LQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVH 372
L + VT++L+N T + G I VD MN K+ + + L I G NIRY
Sbjct: 10 LSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNIRYFI 69
Query: 373 IPENMSLLSTIRHEVSK 423
+P+++ L + + + K
Sbjct: 70 LPDSLPLETLLIDDTPK 86
>UniRef50_Q4CKU9 Cluster: U6 snRNA-associated Sm-like protein LSm4,
putative; n=3; Trypanosoma|Rep: U6 snRNA-associated
Sm-like protein LSm4, putative - Trypanosoma cruzi
Length = 164
Score = 40.7 bits (91), Expect = 0.016
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L V+ + +GK V+V+L N + G + VD MN+ K I +G+ F I G
Sbjct: 61 LDVLRNCRGKVVSVELANGETINGTVMRVDRLMNLLLKQCIRTGAEGDVFWKSRESLIRG 120
Query: 352 RNIRYVHIPENMSLLSTIRHEVSKKFYKPHMKQLTEKK 465
++R V + E ++ R V K KQ T K
Sbjct: 121 ASVRNVRMDERALVMPEARAAVRNKSRPDTKKQATGGK 158
>UniRef50_A2FH88 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 94
Score = 40.3 bits (90), Expect = 0.021
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNL---FI 345
L V +LQGK +TV ++N + G ++ +D F NI N D GN L +I
Sbjct: 4 LHVFRTLQGKRITVHVKNGIVIEGTLQSIDHFYNIKLINTETKD-AGNLNMVSTLSTAYI 62
Query: 346 HGRNIRYVHIPENMSLLSTIRHEVSKK 426
G ++ Y+ +P++ L+ I H+ +++
Sbjct: 63 RGTSVLYIELPKDEIDLN-ILHDATRR 88
>UniRef50_Q10013 Cluster: Probable small nuclear ribonucleoprotein
Sm D1; n=10; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein Sm D1 - Caenorhabditis elegans
Length = 126
Score = 40.3 bits (90), Expect = 0.021
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 193 LQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVH 372
L + V ++L+N T V G I VD MN + D L I G NIRY+
Sbjct: 10 LSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEPVKLDTLSIRGNNIRYII 69
Query: 373 IPENMSL 393
+P+ ++L
Sbjct: 70 LPDPLAL 76
>UniRef50_Q5KJW6 Cluster: Glycine rich protein, putative; n=2;
Dikarya|Rep: Glycine rich protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 117
Score = 39.9 bits (89), Expect = 0.027
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L ++ + QGK + V+L+N G + D FMN++ + G F +FI G
Sbjct: 4 LSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERFWKMKEMFIKG 63
Query: 352 RNIRYVHIPENM 387
I+Y I +N+
Sbjct: 64 NIIKYFRIADNI 75
>UniRef50_A3LPF4 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 147
Score = 39.9 bits (89), Expect = 0.027
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L ++ + + K + ++L+N + G + D +MN++ K+ I G F ++I G
Sbjct: 4 LYLLTAAKTKQILIELKNGETLNGGLVNCDSWMNLTLKDVIQTSSNGETFLKIPEVYIRG 63
Query: 352 RNIRYVHIPENM 387
+I+Y+ +PE +
Sbjct: 64 NHIKYLRLPEEI 75
>UniRef50_P62314 Cluster: Small nuclear ribonucleoprotein Sm D1;
n=37; Eukaryota|Rep: Small nuclear ribonucleoprotein Sm
D1 - Homo sapiens (Human)
Length = 119
Score = 39.9 bits (89), Expect = 0.027
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = +1
Query: 193 LQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVH 372
L + VT++L+N T V G I VD MN K + L I G NIRY
Sbjct: 10 LSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNIRYFI 69
Query: 373 IPENMSLLSTIRHEVSKK 426
+P+++ L T+ +V K
Sbjct: 70 LPDSLP-LDTLLVDVEPK 86
>UniRef50_Q9LGE6 Cluster: Probable U6 snRNA-associated Sm-like
protein LSm4; n=5; Eukaryota|Rep: Probable U6
snRNA-associated Sm-like protein LSm4 - Oryza sativa
subsp. japonica (Rice)
Length = 147
Score = 39.9 bits (89), Expect = 0.027
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L ++ + QG + V+L+N G + D +MNI + I G++F +I G
Sbjct: 4 LSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECYIRG 63
Query: 352 RNIRYVHIPENMSLLSTIRHEVSK 423
I+Y+ +P+ ++ ++ E SK
Sbjct: 64 NTIKYLRVPD--EVIDKVQEETSK 85
>UniRef50_Q9QXA5 Cluster: U6 snRNA-associated Sm-like protein LSm4;
n=128; Eukaryota|Rep: U6 snRNA-associated Sm-like
protein LSm4 - Mus musculus (Mouse)
Length = 137
Score = 39.9 bits (89), Expect = 0.027
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L ++ + Q + V+L+N G + D +MNI+ + I G++F +I G
Sbjct: 4 LSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRG 63
Query: 352 RNIRYVHIPENMSLLSTIRHEVSK 423
I+Y+ IP+ ++ +R E +K
Sbjct: 64 STIKYLRIPD--EIIDMVREEAAK 85
>UniRef50_Q1E7Q6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 178
Score = 39.5 bits (88), Expect = 0.036
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKN--AIYCDPQGNEFAFDNLFIHGRNIR 363
+L V ++L+ND + G+++ VD ++NI + I D + + N+FI G +R
Sbjct: 89 TLTNHTVIIELKNDIRIRGILKSVDQYLNIKLDDIEVIDLDKYPHLSSVKNIFIRGSVVR 148
Query: 364 YVHIPE 381
Y+ +P+
Sbjct: 149 YIVLPQ 154
>UniRef50_A4RMI1 Cluster: Putative uncharacterized protein; n=3;
Fungi/Metazoa group|Rep: Putative uncharacterized
protein - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 125
Score = 39.5 bits (88), Expect = 0.036
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 202 KNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNE-FAFDNLFIHGRNIRYVHIP 378
+ VT++L+N T V G I V MN + +N + P+G + D + I G IRY +P
Sbjct: 13 ETVTIELKNGTIVHGTIASVSPQMNTALRN-VKMTPRGQDPIPLDAMNIRGSTIRYYILP 71
Query: 379 ENMSL 393
+++ L
Sbjct: 72 DSLPL 76
>UniRef50_A7AWX9 Cluster: U6 snRNA-associated Sm-like protein LSm4,
putative; n=1; Babesia bovis|Rep: U6 snRNA-associated
Sm-like protein LSm4, putative - Babesia bovis
Length = 104
Score = 39.1 bits (87), Expect = 0.047
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 229 DTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHGRNIRYVHIPENMSLLSTI 405
+TY G++ D FMN+ NAI +G+EF FI G N++ P+ ++T+
Sbjct: 12 ETY-SGILSSCDAFMNVHMINAICTSKKGDEFWKLSECFIRGNNVKSFRFPDE---VATV 67
Query: 406 RHEVSKKFYKPHM 444
E SK + +M
Sbjct: 68 ALEESKAMVQENM 80
>UniRef50_Q9Y4Z0 Cluster: U6 snRNA-associated Sm-like protein LSm4;
n=5; Coelomata|Rep: U6 snRNA-associated Sm-like protein
LSm4 - Homo sapiens (Human)
Length = 139
Score = 38.7 bits (86), Expect = 0.063
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L ++ + Q + V+L+N G + D +MNI+ + I G++F +I G
Sbjct: 4 LSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRG 63
Query: 352 RNIRYVHIPENMSLLSTIRHEVSKK 426
I+Y+ IP+ ++ ++ EV K
Sbjct: 64 STIKYLRIPD--EIIDMVKEEVVAK 86
>UniRef50_Q4UBR6 Cluster: U6 snrna-associated sm-like protein lsm4,
putative; n=1; Theileria annulata|Rep: U6
snrna-associated sm-like protein lsm4, putative -
Theileria annulata
Length = 105
Score = 38.3 bits (85), Expect = 0.083
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L ++ + + + ++L+N G+++ D FMN+ N + G +F D FI G
Sbjct: 5 LTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVNVVCTSKSGTDFWKLDECFIRG 64
Query: 352 RNIRYVHIPENMS 390
++ + +P ++
Sbjct: 65 NTVKSLRLPNEVA 77
>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
Thermoplasma acidophilum
Length = 83
Score = 38.3 bits (85), Expect = 0.083
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 181 VVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNI 360
V+ S +NV +D++ + G++E D +MNI +NA N+ +D + + G N+
Sbjct: 13 VLKSALSRNVLIDVKGNREYSGILEGYDVYMNIVLQNASEIINGENKGVYDRVLVRGDNV 72
Query: 361 RYV 369
+V
Sbjct: 73 IFV 75
>UniRef50_Q8IIA8 Cluster: Small nuclear ribonucleoprotein D1,
putative; n=2; Eukaryota|Rep: Small nuclear
ribonucleoprotein D1, putative - Plasmodium falciparum
(isolate 3D7)
Length = 126
Score = 37.9 bits (84), Expect = 0.11
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Frame = +1
Query: 193 LQGKNVTVDLRNDTYVCGLIELVDGFMNISFKN----------AIYCDPQGNEFAFDNLF 342
L +NVT++L+N T + G+I VD MN KN A Y + +++
Sbjct: 10 LTNENVTIELKNGTLITGIITAVDIKMNTHMKNVKVVIKNKNIAEYNVNTKQFLSLEHVT 69
Query: 343 IHGRNIRYVHIPENMSLLSTIRHEVSKK 426
I G NIRY + +++ L S + + + K
Sbjct: 70 IRGNNIRYFILSDSLPLDSLLVEDTTPK 97
>UniRef50_Q5CYT7 Cluster: SnRNP core protein; n=1; Cryptosporidium
parvum Iowa II|Rep: SnRNP core protein - Cryptosporidium
parvum Iowa II
Length = 107
Score = 37.9 bits (84), Expect = 0.11
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 208 VTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQG--NEFAFDNLFIHGRNIRYVHIP 378
VTV+L+ND + G + +D ++NI N + + + N FI G +RY+ P
Sbjct: 21 VTVELKNDLQITGTLHSIDQYLNIKLNNTTVNQNESFIHLGSLKNCFIRGSVVRYIFFP 79
>UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm6,
putative; n=1; Filobasidiella neoformans|Rep: U6
snRNA-associated sm-like protein lsm6, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 88
Score = 37.9 bits (84), Expect = 0.11
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +1
Query: 184 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIR 363
+ ++ GK V V + + GL+ +DG+MN++ + A + A+ + F+ G N+
Sbjct: 21 LRNIVGKRVKVRIGSGVDYTGLLTCLDGYMNVALEQAEEWAGEVKTAAYGDCFLRGNNVL 80
Query: 364 YVHIPENM 387
Y+ E++
Sbjct: 81 YISALEDL 88
>UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_27, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 281
Score = 37.1 bits (82), Expect = 0.19
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 351
L ++ + QG + V+L+N G + D +MNI + I G+ F +I G
Sbjct: 90 LSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRG 149
Query: 352 RNIRYVHIPENM 387
I+Y+ +P+ +
Sbjct: 150 NTIKYLRVPDEV 161
>UniRef50_Q6CGF6 Cluster: Similar to tr|Q8IGS9 Drosophila
melanogaster RE35747p; n=1; Yarrowia lipolytica|Rep:
Similar to tr|Q8IGS9 Drosophila melanogaster RE35747p -
Yarrowia lipolytica (Candida lipolytica)
Length = 131
Score = 37.1 bits (82), Expect = 0.19
Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQG-NEFAFDNLFIHG 351
L ++N+ QG+ + V+L++ + G + D +MN++ K G N ++ G
Sbjct: 6 LSLLNAAQGQPMLVELKSGESLRGHLLKCDHWMNLTLKEVEEFSASGENTATVSEYYVRG 65
Query: 352 RNIRYVHIPENMSLLSTIRHEVSKKFYKPHMKQLTEK 462
NI+ + +P+ LL +I+ + S++ + +Q E+
Sbjct: 66 SNIKALQLPD--ELLHSIKQQYSQQREQRQRQQQLEQ 100
>UniRef50_Q5NDZ9 Cluster: Putative snRNP; n=1; Sulfolobus
neozealandicus|Rep: Putative snRNP - Sulfolobus
neozealandicus
Length = 98
Score = 36.7 bits (81), Expect = 0.25
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 142 PQEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNE 321
P EK + L V+ S GK V V LRN G +EL++ M+I K+ + D E
Sbjct: 16 PSEK--KKDDFLEVLKSAVGKVVLVRLRNGLDYVGTLELINNEMDIVLKDCVQLDKITLE 73
Query: 322 FA--FDNLFIHGRNIRYVHI 375
A + L + G N+ ++ I
Sbjct: 74 PARKYGRLVVRGNNVEFIDI 93
>UniRef50_Q96UG3 Cluster: Putative uncharacterized protein putative
LSM4; n=1; Kluyveromyces lactis|Rep: Putative
uncharacterized protein putative LSM4 - Kluyveromyces
lactis (Yeast) (Candida sphaerica)
Length = 183
Score = 36.3 bits (80), Expect = 0.33
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGR 354
L ++ + +G+ + V+L+N V G + VD +MN++ N + G + ++ G
Sbjct: 4 LYLLTNAKGQTMHVELKNGETVEGTLSDVDNWMNLTLSNVTHV-ASGETLKLPSFYLKGS 62
Query: 355 NIRYVHIPENM 387
I+YV++ +++
Sbjct: 63 FIKYVNLQDDI 73
>UniRef50_Q6BXY3 Cluster: Similar to sp|Q02260 Saccharomyces
cerevisiae YGR074w SMD1 snRNA- associated protein; n=4;
Saccharomycetales|Rep: Similar to sp|Q02260
Saccharomyces cerevisiae YGR074w SMD1 snRNA- associated
protein - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 131
Score = 36.3 bits (80), Expect = 0.33
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +1
Query: 208 VTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVHIPENM 387
+TV+L+N + G I MN+S KN P + + I G IR + +P+ +
Sbjct: 18 ITVELKNGNSINGQILSCSPLMNLSMKNIKLSQPHQDPQLLQFINIRGNQIRQILLPDEL 77
Query: 388 SLLSTIRHEVSK 423
++ + + V K
Sbjct: 78 NVDNVLARSVVK 89
>UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 193
Score = 36.3 bits (80), Expect = 0.33
Identities = 18/90 (20%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDP----QGNE----FAF 330
L ++ + +G+ +T++L+N + G++ VD +MN++ + I D G E +
Sbjct: 4 LYLLTNAKGQKITIELKNGETIKGVLTNVDNWMNLTLSDVIQYDSDALNNGAEKPEGLSV 63
Query: 331 DNLFIHGRNIRYVHIPENMSLLSTIRHEVS 420
+++ G I+Y+++ ++ ++ +R +++
Sbjct: 64 PEIYLRGTYIKYINLQDD--IIENVRQQIN 91
>UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 187
Score = 35.9 bits (79), Expect = 0.44
Identities = 14/70 (20%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 181 VVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHGRN 357
++ + G + V+L++ + GL+ D +MN++ + + G++F +++ G
Sbjct: 66 LLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKFMRLPEIYVRGST 125
Query: 358 IRYVHIPENM 387
I+Y+ +P+ +
Sbjct: 126 IKYLRVPDEI 135
>UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=2; Pezizomycotina|Rep: U6 snRNA-associated Sm-like
protein LSm6 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 83
Score = 35.9 bits (79), Expect = 0.44
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 199 GKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYV 369
G VTV L + G ++ VDG+MNI+ + A + ++ + F+ G N+ Y+
Sbjct: 23 GNMVTVKLNSGVIYKGELQSVDGYMNIALEKAEEWVAGQKKRSYGDAFVRGNNVMYI 79
>UniRef50_UPI0000498C5A Cluster: small nuclear ribonucleoprotein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein - Entamoeba histolytica HM-1:IMSS
Length = 111
Score = 35.1 bits (77), Expect = 0.77
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRN-DTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHG 351
L + + +G VT++++ +TY ++E D MN ++ G++ + +FI G
Sbjct: 7 LKIFHESKGTIVTIEVKTGETYRGRMVETEDN-MNCQLRDVTITAKDGSQSRTEYIFIRG 65
Query: 352 RNIRYVHIPENMSLLSTIRHEVSKKFYKPHMKQLTEKK 465
+R+V +PE ++ KK + + KK
Sbjct: 66 NQVRFVVLPEMFKNSPCLKSSELKKHVQVKKPKKNNKK 103
>UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus
fulgidus|Rep: SnRNP, putative - Archaeoglobus fulgidus
Length = 75
Score = 34.7 bits (76), Expect = 1.0
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 181 VVNSLQGKNVTVDLRND-TYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRN 357
+V S+ GK + V+++ + + G +E VD +MN+ NA+ C + + + + G N
Sbjct: 7 MVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGEEKVRSLGEIVLRGNN 66
Query: 358 I 360
+
Sbjct: 67 V 67
>UniRef50_Q06406 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=4; Saccharomycetaceae|Rep: U6 snRNA-associated Sm-like
protein LSm6 - Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 33.5 bits (73), Expect = 2.4
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 184 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAI-YCDPQGNEF--AFD-NLFIHG 351
++ + GK V V L + G +E +DGFMN++ +A + + N+ F+ ++F+ G
Sbjct: 53 LSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSSATEHYESNNNKLLNKFNSDVFLRG 112
Query: 352 RNIRYV 369
+ Y+
Sbjct: 113 TQVMYI 118
>UniRef50_A7RWE9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 455
Score = 33.1 bits (72), Expect = 3.1
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 464 FFSVSCFIWGL*NFLETSCRIVDRSDIFSGICTY 363
F VSC +W L LE SCRI ++ G+CTY
Sbjct: 192 FLEVSCGLWHL---LEVSCRIWYLLEVSRGLCTY 222
>UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep:
ACR204Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 85
Score = 33.1 bits (72), Expect = 3.1
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 184 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAI-YCDPQGNEFAF---DNLFIHG 351
++++ GK V V L + G +E +DGFMN++ +A Y + + N ++F+ G
Sbjct: 17 LSNIIGKPVNVKLHSGMLYQGTLESIDGFMNVALVDASEYYESEQNPVIHRYESDVFLRG 76
Query: 352 RNIRYV 369
+ Y+
Sbjct: 77 TQVMYI 82
>UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=33; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Schizosaccharomyces pombe (Fission yeast)
Length = 75
Score = 33.1 bits (72), Expect = 3.1
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 184 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIR 363
+N + GK V + L + G++ +DG+MN++ + + + FI G N+
Sbjct: 9 LNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKKTNVYGDAFIRGNNVL 68
Query: 364 YV 369
YV
Sbjct: 69 YV 70
>UniRef50_A4FX23 Cluster: Like-Sm ribonucleoprotein, core; n=4;
Methanococcus|Rep: Like-Sm ribonucleoprotein, core -
Methanococcus maripaludis
Length = 72
Score = 32.7 bits (71), Expect = 4.1
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 205 NVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVHI 375
NVTV L++ V G ++ D MN++ +NA + + EF L + G N+ YV +
Sbjct: 18 NVTVFLKDGKVVKGRLKAYDLHMNVALENAKIENDEEKEFPM--LVVRGDNVLYVSL 72
>UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F,
putative; n=1; Babesia bovis|Rep: Small nuclear
ribonucleoprotein F, putative - Babesia bovis
Length = 83
Score = 32.3 bits (70), Expect = 5.4
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 184 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNA-IYCDPQGNEFAFDNLFIHGRN 357
+ ++ K V V L N T GL+ +D MN++ +N YCD + + A+ + FI G N
Sbjct: 10 IANITRKPVIVKLNNGTRFRGLLSSLDDRMNLAMENTKEYCDGELVK-AYGDSFIRGNN 67
>UniRef50_A0CT01 Cluster: Chromosome undetermined scaffold_266,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_266,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 363
Score = 32.3 bits (70), Expect = 5.4
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = +1
Query: 208 VTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVHIPENM 387
VTV+L+ G + + MN+ G + + +++ G IR+V IP+
Sbjct: 18 VTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDGRPMSLEQVYLRGSQIRFVVIPDVF 77
Query: 388 SLLSTIRHEVSKKFYKPHMKQLTEK 462
+ ++ +M+Q+ EK
Sbjct: 78 KYAPMFK-KIRANAKSKNMQQIREK 101
>UniRef50_A0C2U8 Cluster: Chromosome undetermined scaffold_145,
whole genome shotgun sequence; n=5; Eukaryota|Rep:
Chromosome undetermined scaffold_145, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 32.3 bits (70), Expect = 5.4
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = +1
Query: 208 VTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVHIPENM 387
VTV+L+ G + + MN+ G + + +++ G IR+V IP+
Sbjct: 18 VTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDGRPMSLEQVYLRGSQIRFVVIPDVF 77
Query: 388 SLLSTIRHEVSKKFYKPHMKQLTEK 462
+ ++ +M+Q+ EK
Sbjct: 78 KYAPMFK-KIRANAKSKNMQQIREK 101
>UniRef50_Q751K2 Cluster: AGL296Wp; n=1; Eremothecium gossypii|Rep:
AGL296Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 168
Score = 32.3 bits (70), Expect = 5.4
Identities = 12/71 (16%), Positives = 39/71 (54%)
Frame = +1
Query: 175 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGR 354
L ++ + +G+ + ++L+N + G + VD +MN++ ++ ++ +++ G
Sbjct: 4 LYLLTNAKGQKLFIELKNGETIEGELVNVDNWMNLTLQSVVHAG-SDQTLQLPEIYVRGS 62
Query: 355 NIRYVHIPENM 387
I+Y+ + +++
Sbjct: 63 FIKYIRLQDDI 73
>UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2;
Thermoprotei|Rep: Small nuclear ribonucleoprotein -
Cenarchaeum symbiosum
Length = 106
Score = 32.3 bits (70), Expect = 5.4
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 202 KNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVHIPE 381
K VTV L+N+T G +E VD +MN+ +A + + + G N+ ++ +
Sbjct: 45 KAVTVRLKNETEYKGKMENVDSYMNLIMTDAEEFHDSKVVANYGRVIVRGNNVLFIRLEN 104
Query: 382 NM 387
+
Sbjct: 105 EL 106
>UniRef50_Q17348 Cluster: Small nuclear ribonucleoprotein Sm D3;
n=3; Eukaryota|Rep: Small nuclear ribonucleoprotein Sm
D3 - Caenorhabditis elegans
Length = 136
Score = 32.3 bits (70), Expect = 5.4
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +1
Query: 181 VVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNI 360
+++ +G VT++ G + + MN + G DN+FI G I
Sbjct: 10 ILHEAEGHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDGRSHQLDNVFIRGNKI 69
Query: 361 RYVHIPE 381
R++ +P+
Sbjct: 70 RFMILPD 76
>UniRef50_Q01CZ2 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 104
Score = 31.9 bits (69), Expect = 7.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 169 TLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDP 309
+L+C V +L G V ++ R+D + G +E D M+ + +AI P
Sbjct: 11 SLVCFVQALVGTTVVIECRDDVAIRGRLEHCDDDMHCTLVDAIRVTP 57
>UniRef50_Q5DGC2 Cluster: SJCHGC05770 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05770 protein - Schistosoma
japonicum (Blood fluke)
Length = 139
Score = 31.9 bits (69), Expect = 7.2
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +1
Query: 199 GKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFA---FDNLFIHGRNIRYV 369
GK + V LR G + ++D F N+ NA+ N+F L I G NI +
Sbjct: 19 GKKMVVSLRGGRMFIGFLRIIDQFGNVVLHNAVERIHVENKFCDVPQGILLIRGENIIII 78
Query: 370 -HIPENMSLLSTIRHEVSKKFYKPHMKQLTEKK 465
+ +++ + K+ YK +Q +K
Sbjct: 79 GDLNPEVNIDEKLERVSEKEIYKLQQEQTAARK 111
>UniRef50_Q3MP95 Cluster: Putative uncharacterized protein
CaJ7.s010; n=1; Candida albicans|Rep: Putative
uncharacterized protein CaJ7.s010 - Candida albicans
(Yeast)
Length = 95
Score = 31.9 bits (69), Expect = 7.2
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 271 MNISFKNAIYCDPQGNEFA-FDNLFIHGRNIRYVHIPENM 387
MN++ N I D +G +F ++I G +I+Y+ IP+++
Sbjct: 1 MNLTLHNVIQTDSRGEKFMKIPEIYIRGIHIKYLRIPDDI 40
>UniRef50_UPI0000499412 Cluster: U6 snRNA-associated Sm-like
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U6
snRNA-associated Sm-like protein - Entamoeba histolytica
HM-1:IMSS
Length = 71
Score = 31.5 bits (68), Expect = 9.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 211 TVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRN 357
++ L + T G + L+DG MNI +NAI + + FI G N
Sbjct: 22 SIKLNDGTIFKGKMTLIDGLMNIVLENAIEYINGNKDNEYPECFIRGNN 70
>UniRef50_A1CHW9 Cluster: Small nuclear ribonucleoprotein SmD3,
putative; n=12; Eukaryota|Rep: Small nuclear
ribonucleoprotein SmD3, putative - Aspergillus clavatus
Length = 136
Score = 31.5 bits (68), Expect = 9.5
Identities = 14/67 (20%), Positives = 32/67 (47%)
Frame = +1
Query: 181 VVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNI 360
++N QG VT+++ + G + + MN+ K+ G D ++I G ++
Sbjct: 14 LLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDGRVSHLDQVYIRGSHV 73
Query: 361 RYVHIPE 381
++ +P+
Sbjct: 74 KFFIVPD 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,761,638
Number of Sequences: 1657284
Number of extensions: 8666636
Number of successful extensions: 18640
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 18156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18622
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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