Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10f19
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   2.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   5.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   5.0  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 287 LNEMFIKPSTNSINPQTYVSFLKSTVTFFPCKELT 183
           L EMF      S+N +TY+  L        C+ELT
Sbjct: 144 LKEMFYLIIECSLNLETYLDKLIEKNEPIECRELT 178


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = +1

Query: 343 IHGRNIRYVHIPENMSLLSTIRHEVSKKFY 432
           +H   + Y H+PE  S +    H +    Y
Sbjct: 265 LHALQLYYPHVPEYSSSIIMELHNIEGTHY 294


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = +1

Query: 343 IHGRNIRYVHIPENMSLLSTIRHEVSKKFY 432
           +H   + Y H+PE  S +    H +    Y
Sbjct: 280 LHALQLYYPHVPEYSSSIIMELHNIEGTHY 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,105
Number of Sequences: 438
Number of extensions: 2703
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)