Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10f18
(235 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41481 Cluster: P18 protein; n=12; Nucleopolyhedrovirus... 143 8e-34
UniRef50_Q0IL20 Cluster: ORF99; n=14; Nucleopolyhedrovirus|Rep: ... 69 2e-11
UniRef50_Q0N420 Cluster: Ac93-like protein; n=3; Nucleopolyhedro... 69 3e-11
UniRef50_O71120 Cluster: ORF503; n=1; Trichoplusia ni granulovir... 40 0.008
UniRef50_Q6QXM2 Cluster: ORF82; n=2; Granulovirus|Rep: ORF82 - A... 37 0.10
UniRef50_Q8B4M7 Cluster: ORF92-like protein; n=1; Choristoneura ... 36 0.17
UniRef50_Q7T9T7 Cluster: ORF_78; n=1; Adoxophyes orana granulovi... 36 0.17
UniRef50_A5IZT4 Cluster: Putative uncharacterized protein orf82;... 35 0.40
UniRef50_A0BC37 Cluster: Chromosome undetermined scaffold_1, who... 35 0.40
UniRef50_Q91EW3 Cluster: ORF92 similar to AcMNPV ORF93; n=3; Gra... 34 0.53
UniRef50_Q1RJ83 Cluster: Putative uncharacterized protein; n=2; ... 32 2.8
UniRef50_Q8JRX5 Cluster: Putative uncharacterized protein PhopGV... 31 3.8
UniRef50_Q4J719 Cluster: Carbon monoxide dehydrogenase large cha... 31 5.0
UniRef50_UPI00006CAE6C Cluster: hypothetical protein TTHERM_0076... 31 6.6
UniRef50_Q3ZXP7 Cluster: Hydrogenase subunit HymB; n=7; Bacteria... 30 8.7
UniRef50_A5IZF5 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_Q12YG4 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
>UniRef50_P41481 Cluster: P18 protein; n=12;
Nucleopolyhedrovirus|Rep: P18 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 161
Score = 143 bits (346), Expect = 8e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 KTYVNLVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNL 181
KTYV+LVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNL
Sbjct: 93 KTYVHLVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNL 152
Query: 182 NLIGIEIVN 208
NLIGIEIVN
Sbjct: 153 NLIGIEIVN 161
>UniRef50_Q0IL20 Cluster: ORF99; n=14; Nucleopolyhedrovirus|Rep:
ORF99 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 168
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = +2
Query: 2 KTYVNLVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVP--VNWENDNLSVLLKHLH 175
KT V+L+D+SA+ +NV+ CE +T +F++FT S+IVV +P VN++ DNLS LL HL
Sbjct: 98 KTCVDLIDDSAWAANVLESCETLVTYMFKLFTDRSQIVVIIPPEVNYQEDNLSALLNHLL 157
Query: 176 NLNLIGIEI 202
++I +E+
Sbjct: 158 QQSIISLEL 166
>UniRef50_Q0N420 Cluster: Ac93-like protein; n=3;
Nucleopolyhedrovirus|Rep: Ac93-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 171
Score = 68.5 bits (160), Expect = 3e-11
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = +2
Query: 2 KTYVNLVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVP--VNWENDNLSVLLKHLH 175
KTYV LVDESAFG++++ C ++T IF +F L S+I+V +P N DNLS +LKHL
Sbjct: 104 KTYVELVDESAFGNDILESCVDYVTNIFRLFRLQSRIIVVLPPHANLAQDNLSEVLKHLL 163
Query: 176 NLNLIGI 196
++I I
Sbjct: 164 QQSVIEI 170
>UniRef50_O71120 Cluster: ORF503; n=1; Trichoplusia ni
granulovirus|Rep: ORF503 - Trichoplusia ni granulosis
virus (TnGV) (Trichoplusia nigranulovirus)
Length = 68
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 23 DESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDN-LSVLLKHLHNLNLIGIE 199
D SAFG + + C + +++++F +S IVV V + + +N + VLL+ L + NL+ I+
Sbjct: 4 DRSAFGQDCVAQCIDIVYSVYQVFNRTSDIVVNVKQDIDANNVVYVLLEGLRSSNLVDIQ 63
Query: 200 IV 205
V
Sbjct: 64 KV 65
>UniRef50_Q6QXM2 Cluster: ORF82; n=2; Granulovirus|Rep: ORF82 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 167
Score = 36.7 bits (81), Expect = 0.10
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 23 DESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWE-NDNLSVLLKHLHNLNLIGIE 199
+++AFG+ C + + ++E+F+ ++ IVV + + D +++LL HL I E
Sbjct: 93 EDTAFGNECAQLCLEIVQLMYELFSCTTNIVVLIESEADPEDEINLLLAHLERSKYIATE 152
Query: 200 IV 205
V
Sbjct: 153 KV 154
>UniRef50_Q8B4M7 Cluster: ORF92-like protein; n=1; Choristoneura
fumiferana granulovirus|Rep: ORF92-like protein -
Choristoneura fumiferana granulovirus (CfGV)
Length = 140
Score = 35.9 bits (79), Expect = 0.17
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 26 ESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKH-LHNLNLI 190
ESAF ++ C++ + +FE+F + I V + + +DN+ V+L H L L L+
Sbjct: 76 ESAFDIDLKVLCQEIVCTLFELFNCVTDITVYLKADLNDDNVIVILLHELQALELV 131
>UniRef50_Q7T9T7 Cluster: ORF_78; n=1; Adoxophyes orana
granulovirus|Rep: ORF_78 - Adoxophyes orana granulovirus
(AoGV)
Length = 164
Score = 35.9 bits (79), Expect = 0.17
Identities = 15/58 (25%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 26 ESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNW-ENDNLSVLLKHLHNLNLIGI 196
+S+F + ++ ++ ++ FE+F+ SK++V V + E+ N+ LL+ + + N+I +
Sbjct: 101 DSSFDNKIVEMTQELVSISFELFSCMSKVIVYVRYDADESHNIMGLLRKIESRNIINV 158
>UniRef50_A5IZT4 Cluster: Putative uncharacterized protein orf82;
n=1; Spodoptera litura granulovirus|Rep: Putative
uncharacterized protein orf82 - Spodoptera litura
granulovirus
Length = 155
Score = 34.7 bits (76), Expect = 0.40
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 2 KTYVN-LVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWE-NDNLSVLLKHLH 175
K YV + SAFG +N C + ++E+F+ + I V V + + +D+L +LL +L
Sbjct: 86 KKYVQEFGNTSAFGKECVNACLDIVCCMYELFSFIADINVYVRADTDPDDDLFILLTYLQ 145
Query: 176 NLNLIGI 196
+ I I
Sbjct: 146 SSEYITI 152
>UniRef50_A0BC37 Cluster: Chromosome undetermined scaffold_1, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_1,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 273
Score = 34.7 bits (76), Expect = 0.40
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +2
Query: 23 DESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLN 184
+E+ F SN+ NY Q I I E TLS KI E D LL++L ++N
Sbjct: 191 EETKFTSNIQNYGRQLIETIEEQVTLSDKINSNTANKKEGDKQPELLEYLISMN 244
>UniRef50_Q91EW3 Cluster: ORF92 similar to AcMNPV ORF93; n=3;
Granulovirus|Rep: ORF92 similar to AcMNPV ORF93 - Cydia
pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 161
Score = 34.3 bits (75), Expect = 0.53
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 26 ESAFGSNVINYCEQFITAIFEIFTLSSKIVVAV--PVNWENDNLSVLLKHLHNLNLI 190
+SAF +++ C + + FE+F+ ++ IVV V N++++ L+ LL L + N I
Sbjct: 97 QSAFDIDLMQTCREIVYLTFELFSCAANIVVFVHASANYKDNVLAQLLVELQSKNFI 153
>UniRef50_Q1RJ83 Cluster: Putative uncharacterized protein; n=2;
Rickettsia bellii|Rep: Putative uncharacterized protein
- Rickettsia bellii (strain RML369-C)
Length = 430
Score = 31.9 bits (69), Expect = 2.8
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 62 EQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKH 169
+ FIT + +S+K ++++ NW DN+ ++ +H
Sbjct: 104 KSFITLLEHSKKISAKNIISIAENWSKDNIKIIFEH 139
>UniRef50_Q8JRX5 Cluster: Putative uncharacterized protein
PhopGV084; n=1; Phthorimaea operculella
granulovirus|Rep: Putative uncharacterized protein
PhopGV084 - Phthorimaea operculella granulovirus
Length = 161
Score = 31.5 bits (68), Expect = 3.8
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 23 DESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNW-ENDNLSVLLKHLHNLNLIGI 196
D SAF V C + +FE+F ++ I V V + END + LL L +I I
Sbjct: 95 DTSAFDLGVCEICLDMVHTVFELFQCATDIFVFVESSANENDIIYELLNGLSERKIISI 153
>UniRef50_Q4J719 Cluster: Carbon monoxide dehydrogenase large chain;
n=2; Sulfolobus|Rep: Carbon monoxide dehydrogenase large
chain - Sulfolobus acidocaldarius
Length = 725
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 32 AFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLNL 187
AFGS +INY E+F+ A + T P+ W N ++ H ++
Sbjct: 222 AFGSKIINYAEEFVVAYLSVVTKR-------PIKWFNSRTEDMMTTNHGRDM 266
>UniRef50_UPI00006CAE6C Cluster: hypothetical protein TTHERM_00765150;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00765150 - Tetrahymena thermophila SB210
Length = 2339
Score = 30.7 bits (66), Expect = 6.6
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 29 SAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDN-LSVLLKHLHNLNLIG--IE 199
S S++ NY FI + + S + A+P+N N N +SVL+ + NLIG +
Sbjct: 1311 SISSSSLKNYINTFIAFQLQFQNIYSTLNQAIPINAINLNTVSVLITNSSFTNLIGGAVA 1370
Query: 200 IVN*NKSC 223
I N K C
Sbjct: 1371 IQNPQKFC 1378
>UniRef50_Q3ZXP7 Cluster: Hydrogenase subunit HymB; n=7;
Bacteria|Rep: Hydrogenase subunit HymB - Dehalococcoides
sp. (strain CBDB1)
Length = 640
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 36 SAATLLTIANSLSRPFSKFLRSAVKSLWPCPS 131
S+A + I + P K++R+A+K LW PS
Sbjct: 307 SSALMTAIEGRVGEPRPKYIRTAIKGLWDKPS 338
>UniRef50_A5IZF5 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma agalactiae|Rep: Putative uncharacterized
protein - Mycoplasma agalactiae
Length = 805
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +2
Query: 2 KTYVNLVDESAFGSNVIN---YCEQFITAIFEIFTLSSKIV--VAVPVNWENDNLSVLLK 166
K Y NL+D + + N+ N YC + A+ F KIV + +N + +
Sbjct: 724 KRYANLIDGNVWEENLSNLKKYCHNDVLAMIMAFNFIEKIVSDIFPEINELKYTFNNSYQ 783
Query: 167 HLHNLNLIGIEIVN*NKSCGKK 232
+L N + IE++N + KK
Sbjct: 784 YLLNRHKWQIEVINYKERATKK 805
>UniRef50_Q12YG4 Cluster: Putative uncharacterized protein; n=1;
Methanococcoides burtonii DSM 6242|Rep: Putative
uncharacterized protein - Methanococcoides burtonii
(strain DSM 6242)
Length = 128
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 157 YT*IIVFPIDGHGHNDFTAERKNFENGRDKLFA 59
Y+ +VF I+ HG+++ T E K F + D +FA
Sbjct: 26 YSDSLVFAIENHGNDNHTIEVKIFNDDSDMIFA 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,718,141
Number of Sequences: 1657284
Number of extensions: 3674899
Number of successful extensions: 9538
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9536
length of database: 575,637,011
effective HSP length: 56
effective length of database: 482,829,107
effective search space used: 10139411247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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