BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmnc10f18 (235 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 0.37 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 2.0 AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 2.0 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 4.6 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 4.6 >AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase protein. Length = 588 Score = 23.4 bits (48), Expect = 0.37 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = +2 Query: 17 LVDESAFGSNVINYCEQ-FITAIFEIF 94 +VD S G+ ++NY F++A+F F Sbjct: 559 IVDSSTSGATIVNYSIMIFLSAVFISF 585 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 21.0 bits (42), Expect = 2.0 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +3 Query: 69 LSRPFSKFLRSAVKSLWPCPSIG 137 +SRP K R A KS P P G Sbjct: 346 MSRPSDKEEREAQKSQKPSPVTG 368 >AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. Length = 615 Score = 21.0 bits (42), Expect = 2.0 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +2 Query: 95 TLSSKIVVAVPVNWEND 145 TL+SK + PV W ND Sbjct: 463 TLNSKDPLDPPVIWSND 479 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 19.8 bits (39), Expect = 4.6 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -1 Query: 130 DGHGHNDFTAERKNFENG 77 DGH ND R+ NG Sbjct: 68 DGHPVNDVPGVRRVLRNG 85 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 19.8 bits (39), Expect = 4.6 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -1 Query: 130 DGHGHNDFTAERKNFENG 77 DGH ND R+ NG Sbjct: 68 DGHPVNDVPGVRRVLRNG 85 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 65,057 Number of Sequences: 438 Number of extensions: 1151 Number of successful extensions: 5 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 47 effective length of database: 125,757 effective search space used: 3772710 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 36 (19.4 bits)
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