Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10f14
         (129 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   0.50 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   2.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    19   4.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    19   4.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    19   4.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    18   8.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 0.50
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 21  SASWQELASLIXRLNNFVFKKI 86
           S  ++EL S + R+N FV+  I
Sbjct: 603 STPFKELTSNVFRMNQFVYDAI 624


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +1

Query: 4    FFYQSCPHPGRNWLL 48
            FF  +C HP   W +
Sbjct: 1015 FFIAACLHPQEFWCI 1029


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +1

Query: 4    FFYQSCPHPGRNWLL 48
            FF  +C HP   W +
Sbjct: 1015 FFIAACLHPQEFWCI 1029


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +1

Query: 4    FFYQSCPHPGRNWLL 48
            FF  +C HP   W +
Sbjct: 1015 FFIAACLHPQEFWCI 1029


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +1

Query: 4    FFYQSCPHPGRNWLL 48
            FF  +C HP   W +
Sbjct: 1015 FFIAACLHPQEFWCI 1029


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 11  INHVRILAGTGFSHXKAEQ 67
           INH+  + GTG +  +A++
Sbjct: 115 INHMTGMGGTGTAGSQADR 133


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 11  INHVRILAGTGFSHXKAEQ 67
           INH+  + GTG +  +A++
Sbjct: 116 INHMTGMGGTGTAGSQADR 134


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 11  INHVRILAGTGFSHXKAEQ 67
           INH+  + GTG +  +A++
Sbjct: 116 INHMTGMGGTGTAGSQADR 134


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
          1-decarboxylase protein.
          Length = 540

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 7  FYQSCPHP 30
          F+Q CP P
Sbjct: 33 FHQKCPKP 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,543
Number of Sequences: 336
Number of extensions: 292
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 23
effective length of database: 114,857
effective search space used:  2182283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)