Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10e19
(344 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 138 3e-32
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 98 3e-20
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 91 6e-18
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 89 2e-17
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 85 3e-16
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 62 2e-09
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 58 5e-08
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 55 3e-07
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 54 5e-07
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 50 8e-06
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 47 7e-05
UniRef50_Q8YXH3 Cluster: Zam protein; n=6; Cyanobacteria|Rep: Za... 32 2.3
UniRef50_Q5H3B6 Cluster: Putative uncharacterized protein; n=1; ... 31 5.3
UniRef50_Q01W69 Cluster: Putative uncharacterized protein precur... 31 6.9
UniRef50_Q7RHP8 Cluster: Putative uncharacterized protein PY0393... 31 6.9
UniRef50_A4HF56 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_UPI0000D55767 Cluster: PREDICTED: similar to CG9564-PA;... 30 9.2
UniRef50_Q5GSI9 Cluster: Ankyrin repeat-containing protein and p... 30 9.2
UniRef50_A0RRG8 Cluster: Putative uncharacterized protein; n=1; ... 30 9.2
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 138 bits (333), Expect = 3e-32
Identities = 62/92 (67%), Positives = 75/92 (81%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKR 335
KMVLPI+DEDDNQ+K TIARHLVG+KERG+KR
Sbjct: 60 KMVLPIYDEDDNQYKRTIARHLVGHKERGVKR 91
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 98.3 bits (234), Expect = 3e-20
Identities = 49/92 (53%), Positives = 60/92 (65%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKR 335
KMVLPI D D T+AR LV +K G +R
Sbjct: 60 KMVLPIPDADGTALNRTLARSLVNHKAIGDER 91
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 90.6 bits (215), Expect = 6e-18
Identities = 41/92 (44%), Positives = 59/92 (64%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKR 335
KMVLPI D + N + T+ + LV +K G R
Sbjct: 60 KMVLPIPDAEGNIYNRTVGKSLVNHKTLGAAR 91
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/87 (48%), Positives = 52/87 (59%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKE 320
KMVLPI D + + ++ + L+ E
Sbjct: 59 KMVLPIPDAEGTIYNRSVGKSLISGTE 85
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 85.0 bits (201), Expect = 3e-16
Identities = 42/92 (45%), Positives = 52/92 (56%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKR 335
KM L I D D+ T+ R LV + E G R
Sbjct: 60 KMSLAIPDADNKVLFRTVGRSLVKHTEEGTAR 91
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 62.5 bits (145), Expect = 2e-09
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 233
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 234 MSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKR 335
+ K + I D + + + LV + R R
Sbjct: 60 IEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDR 93
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 57.6 bits (133), Expect = 5e-08
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Frame = +3
Query: 75 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 236
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 237 SKMVLPIFDEDDNQ-FKMTIARHLVGNKERGIKRKK 341
K I DN+ FKM + + L+ + + K
Sbjct: 63 LKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNK 98
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 55.2 bits (127), Expect = 3e-07
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 81 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 251
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 252 PIFDEDDNQFKMTIARHLV 308
I FK+ I + LV
Sbjct: 62 EIPSGTGTSFKLLIGKSLV 80
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 54.4 bits (125), Expect = 5e-07
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 105 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQ 278
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I +
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRIGSGVGPE 70
Query: 279 FKMTIARHLVGNKERGIKR 335
F M I + L+ +R
Sbjct: 71 FDMLIGKTLIQQNTEDARR 89
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 50.4 bits (115), Expect = 8e-06
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +3
Query: 105 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM--SKMVLPIFDED 269
N CIF + FD C Y CS DA + DG FICN HL K F++ SK +P D
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILKSKFEIPSGGVD 71
Query: 270 DNQFKMTIARHLVGNKERGIKRKKK 344
+ FKM + + LV E+ K+
Sbjct: 72 NRSFKMLVGQSLVPYAEKSTDPGKR 96
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 47.2 bits (107), Expect = 7e-05
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 105 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDN- 275
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I +N
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEIPSGVNNT 75
Query: 276 QFKMTIARHLV 308
FK + L+
Sbjct: 76 SFKYLVGVSLI 86
>UniRef50_Q8YXH3 Cluster: Zam protein; n=6; Cyanobacteria|Rep: Zam
protein - Anabaena sp. (strain PCC 7120)
Length = 783
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = -2
Query: 286 ILN*LSSSSKMGKTIFDILKRLMRWLLQINHPSS*YASGEHGDLYVMHASNDTMDAKMQR 107
I+ L + + +G+ I + RL R LQ+N PS+ + G L + ++ + + +
Sbjct: 389 IIERLQNLTTIGQAIKE--SRLARGSLQLNLPSNQNPYYDEGSLGAVLVNDSPVRSLLME 446
Query: 106 LTLICRGAIPTGISAILLPL*IWTT 32
L L+ I T +SA+ +P IW T
Sbjct: 447 LVLLVNELIATHLSALGIPA-IWRT 470
>UniRef50_Q5H3B6 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 414
Score = 31.1 bits (67), Expect = 5.3
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +1
Query: 85 RRDK*ELTAAFSRPSCRSTRA*HTSHRVRPTRIMTTDGLSATATSSNVLKCQKWFCPFST 264
RR + A SR C S+++ S RP R + +A A SS+ K + C
Sbjct: 326 RRSSKATSLASSRSPCVSSQSIAASSMARPRRCARSRSTAARAASSSTGKPIRMHCDSRE 385
Query: 265 KTTINSK*RSLGI 303
+ + N+K LGI
Sbjct: 386 RRSGNTKASPLGI 398
>UniRef50_Q01W69 Cluster: Putative uncharacterized protein
precursor; n=1; Solibacter usitatus Ellin6076|Rep:
Putative uncharacterized protein precursor - Solibacter
usitatus (strain Ellin6076)
Length = 693
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAY 182
MAL+P PR+ R+ R + +VSF C P D Y
Sbjct: 217 MALLPEAGIPRRSRILRTLQVGLVSFALCAFQLLPIFADGY 257
>UniRef50_Q7RHP8 Cluster: Putative uncharacterized protein PY03936;
n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY03936 - Plasmodium yoelii yoelii
Length = 1554
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 183 HDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRKKK 344
H + I NS + K + + IF++ DN+F + R LVG ++ K+ KK
Sbjct: 861 HTHNFTILNSSVFKTGESDYICFAIFEKSDNKFYIAFVR-LVGERDIFEKKTKK 913
>UniRef50_A4HF56 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 4200
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -2
Query: 151 VMHASNDTMDAKMQRLTLICRGAIPTGISAILLPL*IWTTAIL*LR 14
V H+S DT D + +R L G+ +G+ LLP W+T++ LR
Sbjct: 1262 VPHSSPDTPDVRAERAPLTRNGSSTSGLFPALLPS-AWSTSLPPLR 1306
>UniRef50_UPI0000D55767 Cluster: PREDICTED: similar to CG9564-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9564-PA - Tribolium castaneum
Length = 825
Score = 30.3 bits (65), Expect = 9.2
Identities = 11/33 (33%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Frame = +3
Query: 15 LNHKIAVVHIYNGNNMAL--MPVGMAPRQMRVN 107
+++ I+V+H++N + +L +P+G+APR +V+
Sbjct: 680 MDYDISVLHLFNSIDFSLSALPIGLAPRNYKVS 712
>UniRef50_Q5GSI9 Cluster: Ankyrin repeat-containing protein and
possible domain WF-3; n=1; Wolbachia endosymbiont strain
TRS of Brugia malayi|Rep: Ankyrin repeat-containing
protein and possible domain WF-3 - Wolbachia sp. subsp.
Brugia malayi (strain TRS)
Length = 1108
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 274 LSSSSKMGKTIFDILKRLMRWLLQINHPSS 185
L SS G +IF ++KRL+ + QIN PSS
Sbjct: 1076 LPSSKIYGVSIFQVIKRLLGFNEQINKPSS 1105
>UniRef50_A0RRG8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: Putative
uncharacterized protein - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 451
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 105 NRCIFASIVSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKMSKM 245
N C + + ++ ITYK+P S YH D ICN H+I + + +K+
Sbjct: 59 NICFNDAHMVYNGKITYKTPYS--FYHKKLDNKIICNKHMISKEESNKL 105
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,398,296
Number of Sequences: 1657284
Number of extensions: 6310348
Number of successful extensions: 14441
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 14197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14434
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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