Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10e19
         (344 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   2.4  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   3.2  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   4.2  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   4.2  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   4.2  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   4.2  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   4.2  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   4.2  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      22   5.6  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            22   5.6  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    22   5.6  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    22   7.4  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 130 TMDAKMQRLTLICRGAIPTGISAILL 53
           T+DA   RLT +    IP  I  + L
Sbjct: 633 TLDASFNRLTRVTPATIPNSIEFLFL 658


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 118 KMQRLTLICRGAIPTGISAILLPL 47
           K QRL LI +   P+G+S    PL
Sbjct: 470 KRQRLVLIPKPGKPSGVSCSYRPL 493


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 154 TSHRVRPTRIMTTDGLSATATSS 222
           T+  +RPT   TTD ++ T T +
Sbjct: 104 TTTTLRPTTTTTTDWITTTTTEA 126


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 154 TSHRVRPTRIMTTDGLSATATSS 222
           T+  +RPT   TTD ++ T T +
Sbjct: 104 TTTTLRPTTTTTTDWITTTTTEA 126


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 154 TSHRVRPTRIMTTDGLSATATSS 222
           T+  +RPT   TTD ++ T T +
Sbjct: 104 TTTTLRPTTTTTTDWITTTTTEA 126


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 154 TSHRVRPTRIMTTDGLSATATSS 222
           T+  +RPT   TTD ++ T T +
Sbjct: 104 TTTTLRPTTTTTTDWITTTTTEA 126


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 154 TSHRVRPTRIMTTDGLSATATSS 222
           T+  +RPT   TTD ++ T T +
Sbjct: 104 TTTTLRPTTTTTTDWITTTTTEA 126


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 154 TSHRVRPTRIMTTDGLSATATSS 222
           T+  +RPT   TTD ++ T T +
Sbjct: 104 TTTTLRPTTTTTTDWITTTTTEA 126


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 69  LAPYCCRYKYGPRQFY 22
           + P+CCRY +  R  Y
Sbjct: 183 VVPFCCRYWHSLRLSY 198


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 130 TMDAKMQRLTLICRGAIPTGISAILL 53
           T+DA   +LT I   AIP  +  + L
Sbjct: 598 TIDASSNQLTEITGSAIPNSVELLYL 623


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 124 PSCRSTRA*HTSHRVRPT 177
           PSCRS  A   S   RPT
Sbjct: 269 PSCRSPPARRRSRSTRPT 286


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 CSPDAYHDDGWFICN 209
           CSP    D+ W +C+
Sbjct: 185 CSPSLVGDNNWRVCD 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,188
Number of Sequences: 2352
Number of extensions: 6432
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)