BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmnc10e16 (704 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC130535-1|AAI30536.1| 867|Homo sapiens C18orf34 protein protein. 31 3.0 BC091517-1|AAH91517.1| 849|Homo sapiens C18orf34 protein protein. 31 3.0 AK126038-1|BAC86407.1| 829|Homo sapiens protein ( Homo sapiens ... 31 3.0 >BC130535-1|AAI30536.1| 867|Homo sapiens C18orf34 protein protein. Length = 867 Score = 31.5 bits (68), Expect = 3.0 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 4/90 (4%) Frame = +2 Query: 230 IKSKVDEQFDQLEREYSDKID--GFHDNIQYFKDEHYSVSCQNGSVLKSKFAKILKSHDY 403 + SK +++ L+ Y K++ H + +E +C+N + + + + Y Sbjct: 273 LDSKQNQELQDLKNHYKKKMEVMDLHRKVNEELEEALE-ACENARLKAQQIKEEIDKDIY 331 Query: 404 TDKKSIETYEK--YCLPQLVDKHNDCYVAV 487 D+K+IE Y++ Y L L D ++ + V Sbjct: 332 QDEKTIEAYKREIYQLNSLFDHYSSSVINV 361 >BC091517-1|AAH91517.1| 849|Homo sapiens C18orf34 protein protein. Length = 849 Score = 31.5 bits (68), Expect = 3.0 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 4/90 (4%) Frame = +2 Query: 230 IKSKVDEQFDQLEREYSDKID--GFHDNIQYFKDEHYSVSCQNGSVLKSKFAKILKSHDY 403 + SK +++ L+ Y K++ H + +E +C+N + + + + Y Sbjct: 273 LDSKQNQELQDLKNHYKKKMEVMDLHRKVNEELEEALE-ACENARLKAQQIKEEIDKDIY 331 Query: 404 TDKKSIETYEK--YCLPQLVDKHNDCYVAV 487 D+K+IE Y++ Y L L D ++ + V Sbjct: 332 QDEKTIEAYKREIYQLNSLFDHYSSSVINV 361 >AK126038-1|BAC86407.1| 829|Homo sapiens protein ( Homo sapiens cDNA FLJ44050 fis, clone TESTI4032895. ). Length = 829 Score = 31.5 bits (68), Expect = 3.0 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 4/90 (4%) Frame = +2 Query: 230 IKSKVDEQFDQLEREYSDKID--GFHDNIQYFKDEHYSVSCQNGSVLKSKFAKILKSHDY 403 + SK +++ L+ Y K++ H + +E +C+N + + + + Y Sbjct: 273 LDSKQNQELQDLKNHYKKKMEVMDLHRKVNEELEEALE-ACENARLKAQQIKEEIDKDIY 331 Query: 404 TDKKSIETYEK--YCLPQLVDKHNDCYVAV 487 D+K+IE Y++ Y L L D ++ + V Sbjct: 332 QDEKTIEAYKREIYQLNSLFDHYSSSVINV 361 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 92,288,750 Number of Sequences: 237096 Number of extensions: 1847181 Number of successful extensions: 12132 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 11960 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12132 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8175213644 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -