Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10e13
         (323 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003455-1|AAO39458.1|  517|Drosophila melanogaster RH38575p pro...    27   7.3  
AY070914-1|AAL48536.1|  576|Drosophila melanogaster RE02452p pro...    27   7.3  
AE014134-41|ABC65871.1|  698|Drosophila melanogaster CG3164-PD, ...    27   7.3  
AE014134-40|AAF51548.2|  698|Drosophila melanogaster CG3164-PB, ...    27   7.3  
AE014134-39|AAS64637.2|  699|Drosophila melanogaster CG3164-PC, ...    27   7.3  
AE014134-38|AAN10508.1|  699|Drosophila melanogaster CG3164-PA, ...    27   7.3  
X83466-1|CAA58469.1|  421|Drosophila melanogaster aurora protein.      26   9.7  
X83465-1|CAA58468.1|  421|Drosophila melanogaster aurora protein.      26   9.7  
AY061229-1|AAL28777.1|  411|Drosophila melanogaster LD16949p pro...    26   9.7  
AE014297-1411|AAF54723.1|  411|Drosophila melanogaster CG3068-PA...    26   9.7  

>BT003455-1|AAO39458.1|  517|Drosophila melanogaster RH38575p
           protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 118 YACKCDNN*LFKIY-MKPGIDSNEKKHISGRKYKQKKILN 234
           YA     N L K+  +K  +D N+   +SGRKY+    LN
Sbjct: 326 YAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLN 365


>AY070914-1|AAL48536.1|  576|Drosophila melanogaster RE02452p
           protein.
          Length = 576

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 118 YACKCDNN*LFKIY-MKPGIDSNEKKHISGRKYKQKKILN 234
           YA     N L K+  +K  +D N+   +SGRKY+    LN
Sbjct: 325 YAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLN 364


>AE014134-41|ABC65871.1|  698|Drosophila melanogaster CG3164-PD,
           isoform D protein.
          Length = 698

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 118 YACKCDNN*LFKIY-MKPGIDSNEKKHISGRKYKQKKILN 234
           YA     N L K+  +K  +D N+   +SGRKY+    LN
Sbjct: 325 YAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLN 364


>AE014134-40|AAF51548.2|  698|Drosophila melanogaster CG3164-PB,
           isoform B protein.
          Length = 698

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 118 YACKCDNN*LFKIY-MKPGIDSNEKKHISGRKYKQKKILN 234
           YA     N L K+  +K  +D N+   +SGRKY+    LN
Sbjct: 325 YAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLN 364


>AE014134-39|AAS64637.2|  699|Drosophila melanogaster CG3164-PC,
           isoform C protein.
          Length = 699

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 118 YACKCDNN*LFKIY-MKPGIDSNEKKHISGRKYKQKKILN 234
           YA     N L K+  +K  +D N+   +SGRKY+    LN
Sbjct: 326 YAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLN 365


>AE014134-38|AAN10508.1|  699|Drosophila melanogaster CG3164-PA,
           isoform A protein.
          Length = 699

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 118 YACKCDNN*LFKIY-MKPGIDSNEKKHISGRKYKQKKILN 234
           YA     N L K+  +K  +D N+   +SGRKY+    LN
Sbjct: 326 YAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLN 365


>X83466-1|CAA58469.1|  421|Drosophila melanogaster aurora protein.
          Length = 421

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 278 RNPYLLTIRCYFFTIFRIFFCLYFLPDMCFF-SLESMP 168
           R+P++L +  YF    RI+  L + P    F +L++ P
Sbjct: 220 RHPHILRLYAYFHDDVRIYLILEYAPQGTLFNALQAQP 257


>X83465-1|CAA58468.1|  421|Drosophila melanogaster aurora protein.
          Length = 421

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 278 RNPYLLTIRCYFFTIFRIFFCLYFLPDMCFF-SLESMP 168
           R+P++L +  YF    RI+  L + P    F +L++ P
Sbjct: 220 RHPHILRLYAYFHDDVRIYLILEYAPQGTLFNALQAQP 257


>AY061229-1|AAL28777.1|  411|Drosophila melanogaster LD16949p
           protein.
          Length = 411

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 278 RNPYLLTIRCYFFTIFRIFFCLYFLPDMCFF-SLESMP 168
           R+P++L +  YF    RI+  L + P    F +L++ P
Sbjct: 210 RHPHILRLYAYFHDDVRIYLILEYAPQGTLFNALQAQP 247


>AE014297-1411|AAF54723.1|  411|Drosophila melanogaster CG3068-PA
           protein.
          Length = 411

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 278 RNPYLLTIRCYFFTIFRIFFCLYFLPDMCFF-SLESMP 168
           R+P++L +  YF    RI+  L + P    F +L++ P
Sbjct: 210 RHPHILRLYAYFHDDVRIYLILEYAPQGTLFNALQAQP 247


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,308,507
Number of Sequences: 53049
Number of extensions: 219232
Number of successful extensions: 450
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)