Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10e13
         (323 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical pr...    28   1.3  
Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical pr...    28   1.8  
Z70212-8|CAB54284.1|  320|Caenorhabditis elegans Hypothetical pr...    27   3.1  
U23510-3|AAC46782.1|  340|Caenorhabditis elegans Hypothetical pr...    27   4.1  
Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical pr...    26   5.4  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    26   5.4  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    26   5.4  
AF067948-6|AAC17701.1|  337|Caenorhabditis elegans Seven tm rece...    26   5.4  
AF000198-5|AAB53053.1|  381|Caenorhabditis elegans Hypothetical ...    26   5.4  
U29378-11|AAP40540.1|  125|Caenorhabditis elegans Adamts family ...    26   7.2  
U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family ...    26   7.2  
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p...    26   7.2  
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p...    26   7.2  

>Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.7 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 134 SHLQAYILQNLSFY--ETLFFVLILSVIFETFIFKICKIKQCHCL 6
           SHL+   L++L+F   + ++FVLI++ +F  F F   K+ Q  C+
Sbjct: 8   SHLEIARLESLNFKISQLIYFVLIITTLF--FTFFALKVIQKKCI 50


>Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical
           protein F36G9.7 protein.
          Length = 280

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -2

Query: 286 VHEEIHTY*---PFVVIFSLYLGFFFVYIFFQICAFFH 182
           +H  IHT     P+ +++S+Y GF  ++++F  C   H
Sbjct: 166 LHISIHTSGFENPYPILYSIYFGFLALFVYF--CKIHH 201


>Z70212-8|CAB54284.1|  320|Caenorhabditis elegans Hypothetical
           protein R04D3.12 protein.
          Length = 320

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 140 LLSHLQAYILQNLSFYETLFFVLILSVIFETFIFK 36
           +++ LQ   ++ +  Y   +F LILS IF   IFK
Sbjct: 120 MVTKLQMSQVEIMKTYVVFYFPLILSTIFVVIIFK 154


>U23510-3|AAC46782.1|  340|Caenorhabditis elegans Hypothetical
           protein R12C12.3 protein.
          Length = 340

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 86  LFFVLILSVIFETFI-FKICKIKQCHCLR 3
           +F+ +ILSVIF+ F+ F I  I   H +R
Sbjct: 179 MFYFIILSVIFDYFLPFLIMTIANYHVIR 207


>Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical
           protein K03D7.6 protein.
          Length = 352

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
 Frame = -3

Query: 321 FFLIMINFILN-KSMKKSILIDHSLLFFHYI*DFFL------FIFSSRYVLFFIGINARF 163
           F++I+    ++ K++K S+LI+H    F  + D FL      + F   Y +FF+G+ + F
Sbjct: 48  FYVIIFKTPISMKNVKTSLLINH---LFCALLDLFLCTVCTVYFFLPMYGMFFVGVLSWF 104

Query: 162 HV 157
            V
Sbjct: 105 EV 106


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 145   LFKIYMKPGIDSNEKKHISGRKYKQKK 225
             L   + KPG +S   K +SG++ KQ+K
Sbjct: 11998 LISSFEKPGQESKTSKTLSGKQKKQEK 12024


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 145   LFKIYMKPGIDSNEKKHISGRKYKQKK 225
             L   + KPG +S   K +SG++ KQ+K
Sbjct: 11998 LISSFEKPGQESKTSKTLSGKQKKQEK 12024


>AF067948-6|AAC17701.1|  337|Caenorhabditis elegans Seven tm
           receptor protein 30 protein.
          Length = 337

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 268 TY*PFVVIFSLYLGFFFVYIFFQICAFFH 182
           TY   + +F+  LG FF +I  QI  FFH
Sbjct: 42  TYRKLLTVFAT-LGMFFSFIEMQIHPFFH 69


>AF000198-5|AAB53053.1|  381|Caenorhabditis elegans Hypothetical
           protein T28F2.1 protein.
          Length = 381

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 119 YILQNLSFYETLFFVLILSVIFETFI 42
           +IL+N  FY  +  VL+L VIF+  +
Sbjct: 10  FILKNNKFYIVIIVVLLLIVIFQWMV 35


>U29378-11|AAP40540.1|  125|Caenorhabditis elegans Adamts family
           protein 2, isoform b protein.
          Length = 125

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 181 WNQCPVSCKS*IINYYRTCK 122
           W+QC VSC + +    RTC+
Sbjct: 29  WSQCSVSCGAGVKRRTRTCR 48


>U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family
           protein 2, isoform c protein.
          Length = 975

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 181 WNQCPVSCKS*IINYYRTCK 122
           W+QC VSC + +    RTC+
Sbjct: 924 WSQCSVSCGAGVKRRTRTCR 943


>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
           protein 2, isoform a protein.
          Length = 1020

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 181 WNQCPVSCKS*IINYYRTCK 122
           W+QC VSC + +    RTC+
Sbjct: 924 WSQCSVSCGAGVKRRTRTCR 943


>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
           protease protein.
          Length = 1020

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 181 WNQCPVSCKS*IINYYRTCK 122
           W+QC VSC + +    RTC+
Sbjct: 924 WSQCSVSCGAGVKRRTRTCR 943


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,984,597
Number of Sequences: 27780
Number of extensions: 139507
Number of successful extensions: 448
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)