Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10e05
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 269 5e-71
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 183 3e-45
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 174 2e-42
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 174 2e-42
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 161 2e-38
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 131 2e-29
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 98 2e-19
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 91 2e-17
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 90 5e-17
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 80 4e-14
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 71 2e-11
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 56 8e-07
UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=... 35 1.6
UniRef50_Q8IL08 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_O31630 Cluster: YjcH protein; n=3; Bacillus|Rep: YjcH p... 33 8.8
UniRef50_Q4V4E3 Cluster: IP10961p; n=4; Sophophora|Rep: IP10961p... 33 8.8
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 269 bits (659), Expect = 5e-71
Identities = 127/212 (59%), Positives = 156/212 (73%), Gaps = 1/212 (0%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 419
KMVLPI+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHL
Sbjct: 60 KMVLPIYDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHL 119
Query: 420 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 599
IY+N VN IC +LK E F T V+ SVY+ TR+IL T+P +CSRV+ D++RFF
Sbjct: 120 IYDNRLEVNRICASLKNNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVANDDVRFF 179
Query: 600 DVTNA-RTHRGGVGDQLFNNYSGFLQNLIRRA 692
D ++ G GD +FNN GFL+NLIRRA
Sbjct: 180 DANVVDNNYQAGNGDTVFNNMPGFLRNLIRRA 211
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 183 bits (446), Expect = 3e-45
Identities = 95/211 (45%), Positives = 128/211 (60%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 419
KMVLPI D D T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+
Sbjct: 60 KMVLPIPDADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHI 119
Query: 420 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 599
IY N+ IC L+ +E F + T +V+ ++ A T +I+ PN +CSR + R +
Sbjct: 120 IYENDVERERICQMLEISERFENDTYKVVDTINARTSAIMAMVTPNRYCSRPLYTDDRIW 179
Query: 600 DVTNARTHRGGVGDQLFNNYSGFLQNLIRRA 692
VT+ VG Q+FN FLQNLI +A
Sbjct: 180 SVTD----ENNVGGQVFNEMPPFLQNLISKA 206
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 174 bits (423), Expect = 2e-42
Identities = 89/211 (42%), Positives = 121/211 (57%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 419
KMVLPI D + + ++ + L+ E R+LIP+ TNY++V L SM EQLIFH+
Sbjct: 59 KMVLPIPDAEGTIYNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQLIFHM 116
Query: 420 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 599
IY+ + N IC L+Y E F S +V+ VY T +L TNP FC+RV+ + R +
Sbjct: 117 IYDEPDKQNEICKLLQYNENFHSDLYKVVERVYNKTAEVLAKTNPERFCARVNINNFRSY 176
Query: 600 DVTNARTHRGGVGDQLFNNYSGFLQNLIRRA 692
+ + + +N GFL+NLI ++
Sbjct: 177 GTAD----ETDIANVTYNAMPGFLKNLINKS 203
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 174 bits (423), Expect = 2e-42
Identities = 86/211 (40%), Positives = 127/211 (60%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 419
KMVLPI D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+
Sbjct: 60 KMVLPIPDAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHM 119
Query: 420 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 599
IY+N EA +C L++ E F + T R+ ++ T +IL TNP +CS+V+ + R +
Sbjct: 120 IYDNVEAQGAVCKALQHNENFQTETYRLAEDMFNRTSAILAMTNPRRYCSQVNSNYARIW 179
Query: 600 DVTNARTHRGGVGDQLFNNYSGFLQNLIRRA 692
+ V +F + FL+NLI A
Sbjct: 180 TTDDV-----NVAGNVFESMPPFLKNLINVA 205
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 161 bits (390), Expect = 2e-38
Identities = 85/211 (40%), Positives = 116/211 (54%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 239
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 240 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 419
KM L I D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+
Sbjct: 60 KMSLAIPDADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHM 119
Query: 420 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 599
IY N E IC+ LK+TE F + V +Y+ T S+L+ NP+ FC+ VS LR F
Sbjct: 120 IYENLEKQKEICERLKFTEHFADRYKNV-QKLYSNTMSVLNMANPDHFCAEVSLTSLRQF 178
Query: 600 DVTNARTHRGGVGDQLFNNYSGFLQNLIRRA 692
+ D F + F++NL+ +A
Sbjct: 179 ---SNEIGNEPAQDTNFELFPKFIKNLVTKA 206
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 131 bits (316), Expect = 2e-29
Identities = 70/182 (38%), Positives = 103/182 (56%), Gaps = 2/182 (1%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 233
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 234 MSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 413
+ K + I D + + + LV + R RILIP+ NYQ V N++ + AE+L+
Sbjct: 60 IEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVL 119
Query: 414 HLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELR 593
HLIYNN A IC+ L+ E F S V+ +V + I+ T+P FCS V+ +++R
Sbjct: 120 HLIYNNRTAAAEICNQLRQQENFRSD---VVENVTSMAYRIIQITDPEAFCSVVASNDIR 176
Query: 594 FF 599
F
Sbjct: 177 SF 178
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 98.3 bits (234), Expect = 2e-19
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Frame = +3
Query: 105 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQ 278
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I +
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRIGSGVGPE 70
Query: 279 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICD 458
F M I + L+ +RI+IP +N+ + +M E+ +F+ IY ++ + +C
Sbjct: 71 FDMLIGKTLIQQNTEDARRIMIPLPSNFLTYLQVENMSATEKFVFYSIYERQDLIAELCR 130
Query: 459 NLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVG 638
L E +T + SV + I+ NP +C ++R FD GV
Sbjct: 131 GLVSQEYYTDDVLAKLQSVVS---HIMGLINPAIYCRPEIIRDIRSFD----NPPGNGVQ 183
Query: 639 DQLFNNYSGFLQNLIR 686
+F+ FL+NLIR
Sbjct: 184 TAVFDQMPPFLKNLIR 199
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 91.5 bits (217), Expect = 2e-17
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Frame = +3
Query: 81 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 251
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 252 PIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNN 431
I FK+ I + LV ++ + I+IPS NY + +N+M AE+ I + IY
Sbjct: 62 EIPSGTGTSFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIYGE 119
Query: 432 EEA-----VNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRF 596
+ +C++L+ + +T ++ +Y+ I+ NP +C + + R
Sbjct: 120 SATEPTGLITQLCESLRSQDFYTDD---MLSDLYSVVAEIMSKINPAIYCRPILNNSSRS 176
Query: 597 FDVTN 611
F T+
Sbjct: 177 FGKTS 181
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 89.8 bits (213), Expect = 5e-17
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Frame = +3
Query: 75 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 236
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 237 SKMVLPIFDEDDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 413
K I DN+ FKM + + L+ + + + +++ +S E++I
Sbjct: 63 LKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVERMII 122
Query: 414 HLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRD-EL 590
+ IYN++E + +CD L E F Q + T +I+ NP+ C R++ + E
Sbjct: 123 YTIYNDKEKIKDLCDILMKQEFF---EQPAWAAFQITLNTIMGLVNPSMLCERLTTNKEN 179
Query: 591 RFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRR 689
R F N T+ +N +S FL+NLI R
Sbjct: 180 RVF---NNETY--------YNQFSPFLKNLINR 201
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 80.2 bits (189), Expect = 4e-14
Identities = 67/203 (33%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Frame = +3
Query: 105 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM--SKMVLPIFDED 269
N CIF + FD C Y CS DA + DG FICN HL K F++ SK +P D
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILKSKFEIPSGGVD 71
Query: 270 DNQFKMTIARHLVGNKERGI---KRILIP-SATNYQEVFNLNSMMQAEQLIFHLIYNNEE 437
+ FKM + + LV E+ KR+LIP S + + + S+M E+ +F+ IY +E+
Sbjct: 72 NRSFKMLVGQSLVPYAEKSTDPGKRLLIPMSVDDVRLAVSSRSLM--ERFVFYTIYEDED 129
Query: 438 AVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNAR 617
+ ICD + E S T SV SI++ PN R F A+
Sbjct: 130 KLKSICDEITNQEEIYS-TSDTWESVNFNINSIINMATPN-----------RLFCPPKAK 177
Query: 618 THRGGVGDQLFNNYSGFLQNLIR 686
D+ F FLQNL++
Sbjct: 178 MLYSYTSDESFKKLPKFLQNLVQ 200
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +3
Query: 105 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDN- 275
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I +N
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEIPSGVNNT 75
Query: 276 QFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAV 443
FK + L+ RI IP+ NY N+ +M E+ +F+ IY+ + V
Sbjct: 76 SFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEKYVFYSIYDEPDTV 131
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 56.0 bits (129), Expect = 8e-07
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Frame = +3
Query: 105 NRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS-KMVLPIFDEDDNQF 281
N CIF D P + + G +IC HL F++S + + + D +
Sbjct: 28 NECIFRYARENDKLNQTIDPGYNCSNYLSGLYICQKHLEDYFRLSLRKINQLEGTDQGRV 87
Query: 282 --KMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVIC 455
++++ L N R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC
Sbjct: 88 FERLSVLSRLPHNYRN---RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKIC 144
Query: 456 DNLK 467
++K
Sbjct: 145 QDVK 148
>UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=1;
Yersinia enterocolitica subsp. enterocolitica 8081|Rep:
Cytosine-specific methyltransferase - Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
Length = 452
Score = 35.1 bits (77), Expect = 1.6
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Frame = +3
Query: 249 LPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEV----FNLNSMMQAE-QLIF 413
L FD+ + MTIA G++ + IK+ L PS + YQ++ FN N+ + +L
Sbjct: 244 LKAFDDLSSPLAMTIAEDAPGSRFKRIKK-LPPSESKYQKLMRKEFNKNNTTPSGLRLAN 302
Query: 414 HLIY--NNEEAVNVICDNLKYTEGFTSGTQRVIHSVYA-----TTRSILDTTNPNTFCSR 572
H Y N + + V DN + + ++ R I ++YA T ++I+ +PN
Sbjct: 303 HSQYVINKFKKILVDIDNPIFQKEYSLSRGRTIPAIYANKIMNTKKAIMRVLDPNKPSVT 362
Query: 573 VSR--DELRFFDVTNARTHRGGVGDQLFNNYSGF 668
V+ D++ +D T R Q F ++ F
Sbjct: 363 VTTLPDDILHYDEPRILTVRECARLQSFPDWFDF 396
>UniRef50_Q8IL08 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 3001
Score = 34.3 bits (75), Expect = 2.9
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Frame = +3
Query: 231 KMSKMVLPIFDEDDNQFKMTIAR--HLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 404
K S + ++++N F + +L+ N+E+ +K I + T+ + V N+N+ + +
Sbjct: 897 KNSTLSTNTLNQENNIFSSSYMNKDNLLNNQEKPLKVIFGQNNTSNENVTNVNTTINSSS 956
Query: 405 L----IFHLIYNNEEAVNVICDNL-KYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCS 569
+ +F+ NN N++ N+ K G T+ + S+ + SI TT NT +
Sbjct: 957 VNNTTLFNAPNNNNNNNNILSTNVEKNLFGQTNNLLKGSSSIMFNSASISGTT--NTINN 1014
Query: 570 RVSRDELRFFDVTNARTHRGGVGDQLFNNYSGF 668
+ + N GG+ LF N + F
Sbjct: 1015 NIDNNNNNNSSSLN-NNSSGGISGGLFGNKNLF 1046
>UniRef50_O31630 Cluster: YjcH protein; n=3; Bacillus|Rep: YjcH
protein - Bacillus subtilis
Length = 240
Score = 32.7 bits (71), Expect = 8.8
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +3
Query: 174 DAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSA 353
+ YH +G KRF ++V P D++ +++ R L+G+ ++ +A
Sbjct: 86 NTYHPEG---SKFSAYKRFIAHELV-PFADDEYPTYQIGYGRTLIGDSLGATVSLM--TA 139
Query: 354 TNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEGFTS-GTQRVIHSVYATTR 530
+Y +F N +MQ+ + H++ EAV D++K+ + GT+ V+ T
Sbjct: 140 LDYPNMFG-NIIMQSPYVDKHVL----EAVKQ-SDDIKHLSIYHQIGTKET--DVHTTDG 191
Query: 531 SILDTTNPNTFCSRVSRDELRFFD 602
+ILD T PN ++ +L +D
Sbjct: 192 NILDFTEPNRELKQLLEKKLSDYD 215
>UniRef50_Q4V4E3 Cluster: IP10961p; n=4; Sophophora|Rep: IP10961p -
Drosophila melanogaster (Fruit fly)
Length = 407
Score = 32.7 bits (71), Expect = 8.8
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 345 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEG 479
PS++ Y + +N+ M+ EQ + NN+ AV + N++++ G
Sbjct: 224 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWSRG 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,173,969
Number of Sequences: 1657284
Number of extensions: 13359890
Number of successful extensions: 33642
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 32443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33603
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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