BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10e05
(694 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023115-1|AAY55531.1| 406|Drosophila melanogaster IP10861p pro... 33 0.49
BT023063-1|AAY55479.1| 407|Drosophila melanogaster IP10961p pro... 33 0.49
AE013599-627|AAF59107.2| 399|Drosophila melanogaster CG30371-PA... 33 0.49
AY089428-1|AAL90166.1| 421|Drosophila melanogaster AT25102p pro... 31 1.1
AE014296-1013|AAF50743.2| 421|Drosophila melanogaster CG10541-P... 31 1.1
>BT023115-1|AAY55531.1| 406|Drosophila melanogaster IP10861p
protein.
Length = 406
Score = 32.7 bits (71), Expect = 0.49
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 345 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEG 479
PS++ Y + +N+ M+ EQ + NN+ AV + N++++ G
Sbjct: 223 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWSRG 267
>BT023063-1|AAY55479.1| 407|Drosophila melanogaster IP10961p
protein.
Length = 407
Score = 32.7 bits (71), Expect = 0.49
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 345 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEG 479
PS++ Y + +N+ M+ EQ + NN+ AV + N++++ G
Sbjct: 224 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWSRG 268
>AE013599-627|AAF59107.2| 399|Drosophila melanogaster CG30371-PA
protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.49
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 345 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEG 479
PS++ Y + +N+ M+ EQ + NN+ AV + N++++ G
Sbjct: 216 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWSRG 260
>AY089428-1|AAL90166.1| 421|Drosophila melanogaster AT25102p
protein.
Length = 421
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 423 YNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF- 599
YNN+ + CD K E ++RV+ TT++ + R E+RF
Sbjct: 37 YNNKIKFRITCDQEKLAERIVEESRRVVDETKDTTKNWQREVEHH---MRERTSEIRFLV 93
Query: 600 DVTNARTHRGGVGDQLFNNYSGFLQNLI 683
D N + + D+ N Y + N I
Sbjct: 94 DELNRQKKTAALEDEALNTYRNRVLNCI 121
>AE014296-1013|AAF50743.2| 421|Drosophila melanogaster CG10541-PA
protein.
Length = 421
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 423 YNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF- 599
YNN+ + CD K E ++RV+ TT++ + R E+RF
Sbjct: 37 YNNKIKFRITCDQEKLAERIVEESRRVVDETKDTTKNWQREVEHH---MRERTSEIRFLV 93
Query: 600 DVTNARTHRGGVGDQLFNNYSGFLQNLI 683
D N + + D+ N Y + N I
Sbjct: 94 DELNRQKKTAALEDEALNTYRNRVLNCI 121
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,192,053
Number of Sequences: 53049
Number of extensions: 639393
Number of successful extensions: 1530
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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