Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10e04
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in PK2...   363   2e-99
UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7; ...   183   3e-45
UniRef50_A0EAK7 Cluster: Chromosome undetermined scaffold_86, wh...    38   0.33 
UniRef50_O00254 Cluster: Proteinase-activated receptor 3 precurs...    37   0.57 
UniRef50_UPI00006CB411 Cluster: hypothetical protein TTHERM_0047...    35   1.7  
UniRef50_A2FSB4 Cluster: Surface antigen BspA-like; n=3; Trichom...    34   3.0  
UniRef50_Q6AMT7 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_P83119 Cluster: Probable G-protein coupled receptor Mth...    34   4.0  
UniRef50_UPI00006CA6E0 Cluster: hypothetical protein TTHERM_0068...    33   7.0  
UniRef50_A2Y5Q5 Cluster: Putative uncharacterized protein; n=2; ...    33   7.0  
UniRef50_Q7RCC9 Cluster: Mechanosensitive ion channel, putative;...    33   9.3  
UniRef50_A2F5D1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  

>UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in
           PK2-LEF7 intergenic region; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 28.5 kDa
           protein in PK2-LEF7 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 247

 Score =  363 bits (893), Expect = 2e-99
 Identities = 172/225 (76%), Positives = 182/225 (80%), Gaps = 3/225 (1%)
 Frame = +3

Query: 51  MGLFTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFN---EFEYLQYWF 221
           MGLF CCTKYTRLSTDTK+KFPY ALSYINVTLCTYTAMLVGYM TFN   E +YLQYW 
Sbjct: 1   MGLFACCTKYTRLSTDTKMKFPYVALSYINVTLCTYTAMLVGYMVTFNDSSELKYLQYWL 60

Query: 222 LLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVF 401
           LLSFLMSV LNAPTLWT  KTTEAHEV+YEMKLF AMYFSNVLLNYVVF DNQMGTNFVF
Sbjct: 61  LLSFLMSVVLNAPTLWTMLKTTEAHEVIYEMKLFHAMYFSNVLLNYVVFLDNQMGTNFVF 120

Query: 402 VNNLIHCCVXXXXXXXXXXXXGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKT 581
           VNNLIHCCV            GHTMG YTDY+Y KSCYMVILFVSVMS TIVMGLECLKT
Sbjct: 121 VNNLIHCCVLFMIFVELLILLGHTMGTYTDYQYVKSCYMVILFVSVMSVTIVMGLECLKT 180

Query: 582 KLVDSSLMFNSFMCALYIMIATVWSXXXXXXXXXXXXXTSIQVVP 716
           KL+D+SLMFN+F+CALYI+IA +WS              SIQVVP
Sbjct: 181 KLIDNSLMFNAFVCALYIVIAIMWSLKNNLTSYYVSNLQSIQVVP 225


>UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7;
           Nucleopolyhedrovirus|Rep: Uncharacterized 26.5 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 243

 Score =  183 bits (446), Expect = 3e-45
 Identities = 83/205 (40%), Positives = 129/205 (62%), Gaps = 3/205 (1%)
 Frame = +3

Query: 51  MGLFTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMA---TFNEFEYLQYWF 221
           M +F  C+ Y RLS +T+ +FP+AA+SY+NVTLC + A++ GY++   TF E ++LQYW 
Sbjct: 1   MNVFKRCSGYIRLSNETRARFPFAAMSYVNVTLCAFGAVVAGYLSAANTFVELQFLQYWL 60

Query: 222 LLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVF 401
           +LS  ++  +NA TL+     TEAHE+VYE+K+  AMYF+N L+N+ + +  +   + V 
Sbjct: 61  MLSLFVTGLINA-TLFLRQGKTEAHEIVYELKMLHAMYFANALVNHGLLATERSAVSAVL 119

Query: 402 VNNLIHCCVXXXXXXXXXXXXGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKT 581
           V NL+HCC             GH +G Y+DYRYAK+CYM+ LFVS     I +G   +K+
Sbjct: 120 VANLVHCCALVLLFVELTVLLGHALGTYSDYRYAKACYMLALFVSAAVAVITVGASGMKS 179

Query: 582 KLVDSSLMFNSFMCALYIMIATVWS 656
             +  +L+    +   Y+++A VW+
Sbjct: 180 APLCDNLLVAVVLSIAYLLVAIVWA 204


>UniRef50_A0EAK7 Cluster: Chromosome undetermined scaffold_86, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_86,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 521

 Score = 37.5 bits (83), Expect = 0.33
 Identities = 29/97 (29%), Positives = 50/97 (51%)
 Frame = -1

Query: 655 DHTVAIIMYKAHINELNIKLLSTSFVFKHSKPITIVKLITETNNITI*HDLAYR*SVYAP 476
           DH   II  K  +N+L IKL+  +F+ KH++    +++ +E N I +   + Y  S+ A 
Sbjct: 417 DHDFCIITMKQMLNQLLIKLM--TFLSKHNEDQISIEIFSEQNFIDL---IIYTKSIAAL 471

Query: 475 IVWPNRISNSRNIIKSTQQ*IKLLTKTKFVPI*LSEN 365
            V   + +N R I+K      KL+   + + I L +N
Sbjct: 472 HVQLQKKTNFRKILKKIGPFDKLIVNQESIIIRLYKN 508


>UniRef50_O00254 Cluster: Proteinase-activated receptor 3 precursor;
           n=16; Amniota|Rep: Proteinase-activated receptor 3
           precursor - Homo sapiens (Human)
          Length = 374

 Score = 36.7 bits (81), Expect = 0.57
 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
 Frame = +3

Query: 60  FTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFLM 239
           F+    +T  +   K+K P  + S+++V   T     +GY+ +    + +   +LL F++
Sbjct: 53  FSALEGWTGATITVKIKCPEESASHLHVKNAT-----MGYLTSSLSTKLIPAIYLLVFVV 107

Query: 240 SVALNAPTLWTA-FKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVF 401
            V  NA TLW   F+T      V+   L  A +   V L + + + +  G N+VF
Sbjct: 108 GVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKI-AYHLNGNNWVF 161


>UniRef50_UPI00006CB411 Cluster: hypothetical protein
           TTHERM_00475020; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00475020 - Tetrahymena
           thermophila SB210
          Length = 274

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +3

Query: 231 FLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVFV 404
           FL+S+AL       A K    +E+ + + +FQ  Y  N+  NY +  +NQ     VF+
Sbjct: 4   FLLSLALVTGLASYALKNFSDYELYFPIAIFQISYAFNIYYNYAIRVENQNMNQGVFI 61


>UniRef50_A2FSB4 Cluster: Surface antigen BspA-like; n=3;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 1010

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 21/70 (30%), Positives = 35/70 (50%)
 Frame = +2

Query: 503 QIMLYGYIVCFSYEFYYCYGFRMFENETS**QFDV*LVYVRFVHYDCNSVVFKKII*LVF 682
           +I L  YI   +Y FY+CY    F  ET     +  + +  F  Y+C S+   K +  V+
Sbjct: 612 KINLNHYIEVSNYAFYFCYSLVKFILET-----NAQISFGSFTFYNCISLKSIKFLSPVY 666

Query: 683 TLQIYKYSSC 712
           +L I+ ++ C
Sbjct: 667 SLGIFCFAGC 676


>UniRef50_Q6AMT7 Cluster: Putative uncharacterized protein; n=1;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 739

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 126 LSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFL 236
           L Y+N T+  +  +LVG++  F  F   + W+LLS+L
Sbjct: 367 LRYLNSTVLNWLKVLVGFIPAFLTFSLTKDWWLLSYL 403


>UniRef50_P83119 Cluster: Probable G-protein coupled receptor
           Mth-like 12 precursor; n=1; Drosophila melanogaster|Rep:
           Probable G-protein coupled receptor Mth-like 12
           precursor - Drosophila melanogaster (Fruit fly)
          Length = 488

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 204 YLQYWFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLL-NYVVFSDNQ 380
           Y++Y+F +S  +  ++ +  LW  F +   HE  Y   ++    +    +   V+FS NQ
Sbjct: 280 YMKYFFSMSSYLWFSVVSFHLWELFTSLNRHEPQYRFLIYNTFVWCTAAIPTVVIFSMNQ 339

Query: 381 MGTN 392
           M  N
Sbjct: 340 MWEN 343


>UniRef50_UPI00006CA6E0 Cluster: hypothetical protein
           TTHERM_00683140; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00683140 - Tetrahymena
           thermophila SB210
          Length = 313

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 24/94 (25%), Positives = 48/94 (51%)
 Frame = +3

Query: 144 TLCTYTAMLVGYMATFNEFEYLQYWFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLF 323
           +L    ++ +   +TFN+FE LQ   +L  + S++ N  +L  +FK  + +   + + + 
Sbjct: 200 SLTKIESLSINMSSTFNQFEQLQIQSILHSIQSLS-NLHSLKISFKNCKLN--THFLPIL 256

Query: 324 QAMYFSNVLLNYVVFSDNQMGTNFVFVNNLIHCC 425
           +  + SN+  N +VF D  +  N +FV  +   C
Sbjct: 257 K-QFLSNIAAN-MVFLDLDISYNPLFVKRITFYC 288


>UniRef50_A2Y5Q5 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 420

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = +3

Query: 111 FPYAALSYINVTLCTYTAMLVGY--MATFNEFEYLQYWFLLSFL---MSVALNAPTL-WT 272
           FP A    + V      AML     MAT    E+LQ+WF+LS L   ++VALN   + WT
Sbjct: 235 FPSARARAVAVAGHLNRAMLAALVSMATILAVEFLQWWFMLSLLPEAIAVALNVAIMAWT 294


>UniRef50_Q7RCC9 Cluster: Mechanosensitive ion channel, putative;
           n=6; Plasmodium (Vinckeia)|Rep: Mechanosensitive ion
           channel, putative - Plasmodium yoelii yoelii
          Length = 1715

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 14/42 (33%), Positives = 28/42 (66%)
 Frame = +3

Query: 507 SCYMVILFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMCALY 632
           SC+ +ILFV++ SF+I+M +  +  K++   L+  S +C+ +
Sbjct: 132 SCF-IILFVNIASFSIIMIIHAIIQKVIIEKLLQPSALCSAF 172


>UniRef50_A2F5D1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 320

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 17/78 (21%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = +3

Query: 126 LSYINVTLCTYTAMLVGYMATFNEFEYLQYW--FLLSFLMSVALNAPTLWTAFKTTEAHE 299
           L+++ ++   ++++ V Y  +  +FE  +Y+    +S L++VA+   T +++FK TE+ +
Sbjct: 27  LTFLQLSSFLFSSIYVVYRISKKQFELSRYYNVIFISILVTVAMIL-TNYSSFKLTESTQ 85

Query: 300 VVYEMKLFQAMYFSNVLL 353
           +++       +  SN+ +
Sbjct: 86  ILFRSPRLIPIMISNIFI 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,306,380
Number of Sequences: 1657284
Number of extensions: 12757932
Number of successful extensions: 29885
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 28718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29875
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)