Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10d23
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   3.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.6  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   7.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 239 DVDLENTSVIILIDAVMTARILDLGVCC 322
           D+D + ++V++LID +   R  +LG  C
Sbjct: 737 DIDFQPSAVLLLIDLMKKNR--NLGAAC 762


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 239 DVDLENTSVIILIDAVMTARILDLGVCC 322
           D+D + ++V++LID +   R  +LG  C
Sbjct: 737 DIDFQPSAVLLLIDLMKKNR--NLGAAC 762


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 239 DVDLENTSVIILIDAVMTARILDLGVCC 322
           D+D + ++V++LID +   R  +LG  C
Sbjct: 737 DIDFQPSAVLLLIDLMKKNR--NLGAAC 762


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 239 DVDLENTSVIILIDAVMTARILDLGVCC 322
           D+D + ++V++LID +   R  +LG  C
Sbjct: 737 DIDFQPSAVLLLIDLMKKNR--NLGAAC 762


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 263 RLYFLDRRPVIFQKHVVLSHF 201
           RLY ++      +KHV L+H+
Sbjct: 365 RLYGIENLQAFIRKHVELAHY 385


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 583 GYSGAHASPPSTETV 539
           GY+G+  +PPS + V
Sbjct: 49  GYTGSEETPPSPQEV 63


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 674 LQCSNNPVRHA 642
           +QCSN+P+R A
Sbjct: 60  IQCSNSPLRKA 70


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 583 GYSGAHASPPSTETV 539
           GY+G+  +PPS + V
Sbjct: 49  GYTGSEETPPSPQEV 63


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 583 GYSGAHASPPSTETV 539
           GY+G+  +PPS + V
Sbjct: 49  GYTGSEETPPSPQEV 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,192
Number of Sequences: 336
Number of extensions: 3792
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)