Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10d23
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-P...    30   2.8  
BT011553-1|AAS15689.1|  215|Drosophila melanogaster AT30947p pro...    29   4.8  
AE014298-3057|AAF50877.3|  221|Drosophila melanogaster CG11233-P...    29   4.8  
AF097364-1|AAC71035.1|  530|Drosophila melanogaster Drongo protein.    29   8.4  

>AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-PA
           protein.
          Length = 214

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +3

Query: 462 PVPSNRNTLSHSCTERHAHLFLPPAAT-----VSVEGGDACAPEYPGTASCKSA 608
           P PS+ NT SHS ++ +A+   PP  T      ++  G A A    GTA+  +A
Sbjct: 135 PNPSSHNTNSHSSSQANANANPPPNTTNNITAATLVAGAAAAAAATGTAATSTA 188


>BT011553-1|AAS15689.1|  215|Drosophila melanogaster AT30947p
           protein.
          Length = 215

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 493 TLVPNATRTYFCLQ--QQRFPSKGVTHVHLSTLEQRHANRR 609
           +L P A  T +CL+  QQR  ++   H H   ++  H NRR
Sbjct: 48  SLQPVAAPTMYCLRLAQQRPITERHVHFHAGVIDNEHMNRR 88


>AE014298-3057|AAF50877.3|  221|Drosophila melanogaster CG11233-PA
           protein.
          Length = 221

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 493 TLVPNATRTYFCLQ--QQRFPSKGVTHVHLSTLEQRHANRR 609
           +L P A  T +CL+  QQR  ++   H H   ++  H NRR
Sbjct: 48  SLQPVAAPTMYCLRLAQQRPITERHVHFHAGVIDNEHMNRR 88


>AF097364-1|AAC71035.1|  530|Drosophila melanogaster Drongo protein.
          Length = 530

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 628 PALLHTPADLHDAVPGYSGAHASPPSTETVAAGGKNKCA 512
           PA  HT    H+   GY+  H +PP+ +  +A G  K A
Sbjct: 144 PATNHTQNGHHN---GYASIHLTPPAAQRTSANGLQKVA 179


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,757,322
Number of Sequences: 53049
Number of extensions: 688485
Number of successful extensions: 2386
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2386
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)