Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10d20
         (734 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023C9B6 Cluster: hypothetical protein FG00211.1; ...    38   0.34 
UniRef50_A4HJJ8 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_UPI00015B450A Cluster: PREDICTED: similar to nad dehydr...    34   3.1  
UniRef50_A2YTD2 Cluster: Putative uncharacterized protein; n=3; ...    33   7.3  
UniRef50_Q75DX0 Cluster: ABL097Cp; n=1; Eremothecium gossypii|Re...    33   9.6  

>UniRef50_UPI000023C9B6 Cluster: hypothetical protein FG00211.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG00211.1 - Gibberella zeae PH-1
          Length = 285

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
 Frame = +3

Query: 438 GQFCVIYLFLLTTSLLV--DNIRIGIKPRAFEK*RDVDVENTGAIILIDAVMTARILDLG 611
           G+ C +     TT L V  D I   I+        +  + N G II+I  ++   IL L 
Sbjct: 110 GEDCSLISVRKTTRLFVIGDFITFNIQGNGGGLLANEKLANAGKIIVIVGLIAQIILFLA 169

Query: 612 --VCCN-YHRRDRVVCRKSKTPTPQDVSWHSSVEPLFRT 719
             VCC  +HRR RV  R+S TP   ++ W + +  L+ T
Sbjct: 170 FVVCCVVFHRRFRVHLRQSHTPV--EIRWEAYLNMLYMT 206


>UniRef50_A4HJJ8 Cluster: Putative uncharacterized protein; n=1;
           Leishmania braziliensis|Rep: Putative uncharacterized
           protein - Leishmania braziliensis
          Length = 918

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 48  LSARNPIRGAQPGLESGKHELKRMYGT-NDREPMWGDT 158
           ++ R P+R A  G ESG    + MYGT NDR   W  T
Sbjct: 401 INRRTPLRSATSGFESGSLVWQSMYGTNNDRNGEWSST 438


>UniRef50_UPI00015B450A Cluster: PREDICTED: similar to nad
            dehydrogenase; n=1; Nasonia vitripennis|Rep: PREDICTED:
            similar to nad dehydrogenase - Nasonia vitripennis
          Length = 909

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = -1

Query: 245  GLPGFGNNIDSKKY*QTKFVLSQSAHCFVGVTPHRFAVVCSVHSFQFMFTRFQSRLSSP 69
            G PG+ N+ D  +    +F+   SA   + +  HRF +   +HS  F   + +  + +P
Sbjct: 841  GHPGYYNSQDENRVVTNEFITDSSAVYEIDIAGHRFPLTPHIHSLSFTSNKSKKYIPTP 899


>UniRef50_A2YTD2 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 309

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -1

Query: 365 NYTSPKHVLTRT--AHTNATHKKEAKAQRGIVFIVLALALGRGLPGFGN 225
           NY   K   ++    H NA  ++ + A+RG      A A GRGL GFG+
Sbjct: 114 NYCQRKFYTSQALGGHQNAHKRERSLAKRGAAVAAAAAAAGRGLYGFGD 162


>UniRef50_Q75DX0 Cluster: ABL097Cp; n=1; Eremothecium gossypii|Rep:
           ABL097Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 119

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 618 CNYHRRDRVVCRKSKTPTPQDVSWHSSVE 704
           C++ +RD  VC K K P  QD+  H S +
Sbjct: 37  CDFRQRDLAVCIKQKVPVVQDIMKHCSAQ 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,526,616
Number of Sequences: 1657284
Number of extensions: 12930247
Number of successful extensions: 29891
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29888
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)