Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10d16
(425 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate... 165 3e-40
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;... 160 1e-38
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/... 153 2e-36
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular... 151 6e-36
UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal ... 93 2e-18
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam... 93 2e-18
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar... 88 6e-17
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T... 79 4e-14
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:... 75 5e-13
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell... 75 8e-13
UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Meta... 73 2e-12
UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:... 71 1e-11
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha... 62 4e-09
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ... 62 6e-09
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa... 55 5e-07
UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 53 2e-06
UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;... 48 6e-05
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu... 47 1e-04
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar... 47 2e-04
UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal ... 46 2e-04
UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9; Euryar... 46 3e-04
UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13; Archa... 46 3e-04
UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus... 46 4e-04
UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:... 45 6e-04
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact... 42 0.007
UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 39 0.037
UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Re... 36 0.26
UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole gen... 34 1.1
UniRef50_Q7X8M6 Cluster: OJ000223_09.12 protein; n=3; Oryza sati... 31 7.5
UniRef50_Q7QFC6 Cluster: ENSANGP00000020801; n=2; Culicidae|Rep:... 31 9.9
>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
(Human)
Length = 84
Score = 165 bits (402), Expect = 3e-40
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = +2
Query: 32 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 211
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 212 TILCQPTGGRARLTEGCSFRRKQH 283
T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
protein - Homo sapiens (Human)
Length = 84
Score = 160 bits (389), Expect = 1e-38
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +2
Query: 32 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 211
MPLA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 212 TILCQPTGGRARLTEGCSFRRKQH 283
T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
Neurospora crassa
Length = 82
Score = 153 bits (370), Expect = 2e-36
Identities = 66/82 (80%), Positives = 74/82 (90%)
Frame = +2
Query: 32 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 211
M LA+DLL+PSPASE RKHKLK LVP P S+FMDVKCPGC+ ITTVFSHAQ VV+C GC+
Sbjct: 1 MVLAVDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCT 60
Query: 212 TILCQPTGGRARLTEGCSFRRK 277
T+LCQPTGG+ARLTEGCSFRRK
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRK 82
>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
Nasonia vitripennis
Length = 2064
Score = 151 bits (366), Expect = 6e-36
Identities = 66/83 (79%), Positives = 71/83 (85%)
Frame = +2
Query: 29 TMPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGC 208
+MPLA D LHPSPA E+RKHKLKRLV PNSYFMDVKCPGCY I T+FSHAQR V C GC
Sbjct: 1979 SMPLAKDFLHPSPAEEKRKHKLKRLVQKPNSYFMDVKCPGCYAIKTIFSHAQRPVECDGC 2038
Query: 209 STILCQPTGGRARLTEGCSFRRK 277
TILC PTGG+ARLTEGCSFR+K
Sbjct: 2039 RTILCTPTGGKARLTEGCSFRKK 2061
>UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein S27 - Canis familiaris
Length = 115
Score = 93.5 bits (222), Expect = 2e-18
Identities = 45/64 (70%), Positives = 50/64 (78%)
Frame = +2
Query: 32 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 211
MPL DLLHPSP ++RKHK K LV PNSYFMD+KCPGCYKITTVFSHAQ VV+ A
Sbjct: 1 MPLVKDLLHPSP-EKKRKHKKKHLVQSPNSYFMDMKCPGCYKITTVFSHAQTVVLKA--Q 57
Query: 212 TILC 223
T+ C
Sbjct: 58 TLRC 61
>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
lamblia ATCC 50803
Length = 81
Score = 93.1 bits (221), Expect = 2e-18
Identities = 38/70 (54%), Positives = 49/70 (70%)
Frame = +2
Query: 44 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 223
+DLL+P P E+RKHKLKRLV PNSYF+++KC GC I V+SHA V C GC++ +
Sbjct: 3 VDLLYPDPVEEQRKHKLKRLVQGPNSYFLEIKCAGCQDIVVVYSHANTPVFCPGCTSQIS 62
Query: 224 QPTGGRARLT 253
PTGG+ T
Sbjct: 63 IPTGGKCAFT 72
>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
theta|Rep: 40S ribosomal protein S27 - Guillardia theta
(Cryptomonas phi)
Length = 81
Score = 88.2 bits (209), Expect = 6e-17
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +2
Query: 74 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 253
E+ KHK KR++P+PNSYF+++ C C +FSH+Q +VC C+ LC PTGG+ARL
Sbjct: 14 EKMKHKKKRIIPNPNSYFINIICKNCKNKNIIFSHSQTKIVCKNCALNLCYPTGGKARLI 73
Query: 254 EGCSFRR 274
+GC F R
Sbjct: 74 KGCKFSR 80
>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
putative - Trichomonas vaginalis G3
Length = 86
Score = 79.0 bits (186), Expect = 4e-14
Identities = 35/78 (44%), Positives = 45/78 (57%)
Frame = +2
Query: 38 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 217
L +D+LHPS E +K K LVP+P S F+ ++CP C +TT FSH+ V C C T
Sbjct: 4 LDVDILHPSVEQEAHTNKKKTLVPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTP 63
Query: 218 LCQPTGGRARLTEGCSFR 271
L PTGGR L + R
Sbjct: 64 LATPTGGRILLADQVEIR 81
>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
LRRGT00170 - Rattus norvegicus (Rat)
Length = 496
Score = 75.4 bits (177), Expect = 5e-13
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +2
Query: 74 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPT 232
E+RKHK K LV P+SYFMDVK GCYK+ +FS VV+ GCST+ CQPT
Sbjct: 202 EKRKHKKKHLVQSPSSYFMDVKYLGCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254
>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
natans|Rep: Ribosomal protein S27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 93
Score = 74.5 bits (175), Expect = 8e-13
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +2
Query: 44 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 223
+DL +PS +E +KHKLKRL+ PNS+++ KC C KI +FSH+ C CST+L
Sbjct: 8 LDLSNPSKKTEAKKHKLKRLIQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLT 67
Query: 224 QPTGGR 241
+P+GG+
Sbjct: 68 RPSGGK 73
>UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Metazoa
group|Rep: Ribosomal protein S27 - Homo sapiens (Human)
Length = 66
Score = 73.3 bits (172), Expect = 2e-12
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 32 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 148
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPG
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:
LRRGT00162 - Rattus norvegicus (Rat)
Length = 291
Score = 70.5 bits (165), Expect = 1e-11
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +2
Query: 29 TMPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 196
TM L L + E+RKHK +RLV PNSYFMDV+CPG Y+ITTVFS AQ VV+
Sbjct: 166 TMKLRRVCLQTAAKEEQRKHKKRRLVQSPNSYFMDVQCPGRYEITTVFSRAQTVVL 221
>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
- Encephalitozoon cuniculi
Length = 85
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +2
Query: 38 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 217
+A DL P+ +K RL N +FM V+C GC T +SH+Q + C GC I
Sbjct: 1 MASDLAFPTREKVGSTYKKDRLYREGNGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDI 60
Query: 218 LCQPTGGRARLTEGCSFRR 274
+ +GGRA ++ C F++
Sbjct: 61 ILTSSGGRAVVSPNCEFKK 79
>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 217
Score = 61.7 bits (143), Expect = 6e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2
Query: 47 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 196
DLL+P E++K+K KRL+ PNSYFMDVKC C I +FS+AQ ++
Sbjct: 4 DLLNPIYEEEKQKNKFKRLIQAPNSYFMDVKCAQCQNIQMIFSNAQSTII 53
Score = 37.9 bits (84), Expect = 0.087
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 206 CSTILCQPTGGRARLTEGCSFRRK 277
CS ILC+PTGG+ ++ GC+F+ K
Sbjct: 193 CSAILCKPTGGKVQIQAGCAFKIK 216
>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
aerophilum
Length = 67
Score = 55.2 bits (127), Expect = 5e-07
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2
Query: 95 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 250
K L+P P S F+ +CP C FSHA VV C C +L PTGG+A+L
Sbjct: 7 KVLIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58
>UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4;
Thermoprotei|Rep: 30S ribosomal protein S27e - Aeropyrum
pernix
Length = 73
Score = 53.2 bits (122), Expect = 2e-06
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +2
Query: 95 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 250
K L+P P S F+ V CP C VFSH+ C C +L +PTGG+AR+
Sbjct: 13 KVLIPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKARI 64
>UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YKL156C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 38
Score = 48.4 bits (110), Expect = 6e-05
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -3
Query: 150 QPGHLTSMK*ELGCGTSRLSLCFLLSDAGEGCNKS 46
QPGHLTS K +LG T+ +LCFL S+A GCNKS
Sbjct: 4 QPGHLTSRKYDLGPWTNVFNLCFLASEAAVGCNKS 38
>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
symbiosum
Length = 224
Score = 47.2 bits (107), Expect = 1e-04
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +2
Query: 104 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 250
VP P S F+ ++C C T V+S A+ V C C +L +P GG+A L
Sbjct: 8 VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL 56
>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Halobacterium salinarium (Halobacterium halobium)
Length = 57
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +2
Query: 125 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 250
F +V+CP C TVF A V CA C T L +PTGG A L
Sbjct: 5 FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46
>UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Homo sapiens|Rep: PREDICTED: similar
to ribosomal protein S27 - Homo sapiens
Length = 83
Score = 46.4 bits (105), Expect = 2e-04
Identities = 31/84 (36%), Positives = 38/84 (45%)
Frame = +2
Query: 32 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 211
MPL DL HP +RR KRLV + Y MDVKC GC K V+ VV C C
Sbjct: 1 MPLTKDLPHPL---QRRSGNKKRLVQSQDCYVMDVKCSGCPKAAVVWEFC--VVDCPACR 55
Query: 212 TILCQPTGGRARLTEGCSFRRKQH 283
+ P G + + +QH
Sbjct: 56 LL---PDRGTSEAYRKMLLQTEQH 76
>UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Pyrococcus furiosus
Length = 63
Score = 46.0 bits (104), Expect = 3e-04
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +2
Query: 95 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 241
K ++P P S F+ VKC C VFSH V C C L +PTGG+
Sbjct: 3 KPIIPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51
>UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13;
Archaea|Rep: 30S ribosomal protein S27e - Methanopyrus
kandleri
Length = 73
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 101 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 250
LVP P S F+ V+C C +F +A V C C L +PTGG+A++
Sbjct: 15 LVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKI 64
>UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S27E - Candidatus Nitrosopumilus maritimus SCM1
Length = 65
Score = 45.6 bits (103), Expect = 4e-04
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 104 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 250
+P P+S F V C C ++ V+SHA V C C + + TG +A++
Sbjct: 8 IPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKAKI 56
>UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:
LRRGT00168 - Rattus norvegicus (Rat)
Length = 109
Score = 45.2 bits (102), Expect = 6e-04
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 35 PLAIDLLHPSPASERRKHKLKRLVPHPNSYFMD 133
PLA DL HP P E+RK+K KRLV PNSYF++
Sbjct: 8 PLAKDL-HPCPEEEKRKYKKKRLVQSPNSYFVE 39
>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
Halobacteriaceae|Rep: Ribosomal protein S27.eR -
Haloquadratum walsbyi (strain DSM 16790)
Length = 75
Score = 41.5 bits (93), Expect = 0.007
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +2
Query: 125 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 244
F ++CP C +F A VV CA C T L PTGG A
Sbjct: 5 FYQLQCPDCNNEQVIFGKASTVVNCAVCGTTLATPTGGDA 44
>UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S27e -
Thermoplasma acidophilum
Length = 65
Score = 39.1 bits (87), Expect = 0.037
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 116 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 238
N +F+ +KC C + VF+ V C C + +PTGG
Sbjct: 13 NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53
>UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Rep:
Cxpwmw06 - Periplaneta americana (American cockroach)
Length = 54
Score = 36.3 bits (80), Expect = 0.26
Identities = 13/33 (39%), Positives = 25/33 (75%)
Frame = -2
Query: 220 KDR*ASSADHHSLCVTKNCCNLVTARALNIHEI 122
+DR S +++LC+T++ C+LV RAL++H++
Sbjct: 22 QDRRTSCTHYYTLCMTEHRCDLVATRALHVHKV 54
>UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 302
Score = 34.3 bits (75), Expect = 1.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 116 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEG 259
N++ + CP C + + ++V CAGC I+ QP G +R + G
Sbjct: 239 NNFVIKGNCPACRR--QFIGYKNQIVRCAGCGNIVWQPKGDVSRGSRG 284
>UniRef50_Q7X8M6 Cluster: OJ000223_09.12 protein; n=3; Oryza
sativa|Rep: OJ000223_09.12 protein - Oryza sativa subsp.
japonica (Rice)
Length = 424
Score = 31.5 bits (68), Expect = 7.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 41 AIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTIL 220
A+ LLHP L ++PH S +D CP Y+I ++ RVV C+++
Sbjct: 148 AVRLLHPFTGDTAELPPLGTVLPHLGSRLLD--CPAPYRIRSL----ARVV----CASVS 197
Query: 221 CQPTGGRA 244
C TG A
Sbjct: 198 CSATGAGA 205
>UniRef50_Q7QFC6 Cluster: ENSANGP00000020801; n=2; Culicidae|Rep:
ENSANGP00000020801 - Anopheles gambiae str. PEST
Length = 611
Score = 31.1 bits (67), Expect = 9.9
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 137 KCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 244
+CP C K TV Q C C TI CQP G++
Sbjct: 545 QCPNCKKEFTVTRRKQH---CRHCGTIYCQPCLGKS 577
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,384,082
Number of Sequences: 1657284
Number of extensions: 7367484
Number of successful extensions: 16541
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16539
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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