Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10d12
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   6.8  
AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    23   6.8  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   6.8  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 5/17 (29%), Positives = 16/17 (94%)
 Frame = -2

Query: 55  IKIEHCDRNVLSIEKQR 5
           + +E+C++++++I+KQ+
Sbjct: 351 LMVEYCEQDIITIDKQK 367


>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 516 VALFGRHPEVGGSGVEYHLERLRRRADT 433
           +A+FGR PE+    +EY  +  R   D+
Sbjct: 120 LAIFGRKPEIPEDRIEYVRKAYRLLEDS 147


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 632 KPERLPEPYCIANWVPFATYDVDLR 558
           K + L EP    N++P   YDVDL+
Sbjct: 853 KNDSLEEPEKQINYLPDWLYDVDLK 877


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,783
Number of Sequences: 2352
Number of extensions: 14383
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)