Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10d11
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical pr... 101 5e-22
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 33 0.26
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 32 0.46
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 32 0.46
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 31 0.61
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z96047-5|CAB09415.1| 379|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 29 2.5
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 29 2.5
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 29 2.5
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical ... 29 3.3
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 3.3
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 29 4.3
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 29 4.3
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 29 4.3
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 29 4.3
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 28 5.7
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 28 5.7
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 5.7
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 9.9
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 9.9
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical pr... 27 9.9
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 27 9.9
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 27 9.9
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 27 9.9
>Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical
protein T06E6.1 protein.
Length = 431
Score = 101 bits (242), Expect = 5e-22
Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Frame = +3
Query: 114 LDIFVGSTIGSFKHVXXXXXXXXXXXXCIENLVDVKSLQ-KGEGITCMEWGNKEQTEILI 290
+D +VG+T G+ K +NL ++KSL K + IT M W +++QTEILI
Sbjct: 1 MDCYVGATTGALKGAILKENT-------FQNLNEIKSLDPKSDEITSMIWNDEQQTEILI 53
Query: 291 GKKNQQIQVYHTLQGNKC-IYTADYAEGHVVGLGKVNNTLVSAVSSGTVRVWGDDAN--E 461
+ N+ +Q+ + I T G + GL K + +V+ V SG +++W D +
Sbjct: 54 ARVNRDLQLLGIEENELVSILTVTGGTGPIKGLHKADEKIVTCVESGELQIWNDKSEILS 113
Query: 462 DIFTGGKLDRMRVCSDDTLFATGGEENDLKVWRVGESQPTFSAKNLAHDWLQLRQPVWVT 641
+ TG + MR ++ TGG +N LK W + Q T+SAKN+ D L L P+ +T
Sbjct: 114 EWKTGPGVAVMRGSTEKPEIVTGGMKNLLKTWNLETGQQTWSAKNVPPDMLGLEIPIMIT 173
Query: 642 DLVFVPGE 665
D F+PG+
Sbjct: 174 DARFIPGQ 181
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +3
Query: 375 VVGLGKVNNTLVSAVSSGTVRVWGD-----DANEDIFTGGKLDRMRVC---SDDTLFATG 530
VVG+ + + +VS T+R W D +F G + +C D +F TG
Sbjct: 99 VVGVPQKESQIVSISGDSTIRCWDLNQSTLDRKSQVFFGHEGSVRSICFAPDDPNVFVTG 158
Query: 531 GEENDLKVW 557
G + +K+W
Sbjct: 159 GRDFQVKIW 167
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 31.9 bits (69), Expect = 0.46
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +3
Query: 228 QKGEGITCMEWGNKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNNTL 407
+ +G+ C+++ + +I+ G ++ I+++ + C G V+ L N +
Sbjct: 220 ENSKGVYCLQY---DDDKIVSGLRDNTIKIWDR-KDYSCSRILSGHTGSVLCLQYDNRVI 275
Query: 408 VSAVSSGTVRVWGDDANEDIFT 473
+S S TVRVW + E I T
Sbjct: 276 ISGSSDATVRVWDVETGECIKT 297
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 31.9 bits (69), Expect = 0.46
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +3
Query: 228 QKGEGITCMEWGNKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNNTL 407
+ +G+ C+++ + +I+ G ++ I+++ + C G V+ L N +
Sbjct: 220 ENSKGVYCLQY---DDDKIVSGLRDNTIKIWDR-KDYSCSRILSGHTGSVLCLQYDNRVI 275
Query: 408 VSAVSSGTVRVWGDDANEDIFT 473
+S S TVRVW + E I T
Sbjct: 276 ISGSSDATVRVWDVETGECIKT 297
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 31.5 bits (68), Expect = 0.61
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Frame = +3
Query: 207 LVDVKSLQKGEGITCMEWGNKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGL 386
L D+ + + +T ++W +K + +G Q++ K ++ VG
Sbjct: 429 LCDLGQTNEQDQVTSVQWCDKGDL-LAVGTSRGVTQIWDVTTQKKTRELTGHSSR--VGC 485
Query: 387 GKVNNTLVSAVSSGTVRVWGDDANEDIFTGGKLD--RMRVCS-----DDTLFATGGEEND 545
N + + S + D +D G KL R VC D L A+GG +N
Sbjct: 486 LAWNADTICSGSRDRTIMHRDIRCDDNDMGRKLTNHRQEVCGLKWSPDKQLLASGGNDNQ 545
Query: 546 LKVWRVGESQP--TFSAKNLA 602
L VW + ++P T++ N A
Sbjct: 546 LLVWNLRRNEPIQTYTQHNAA 566
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.1 bits (67), Expect = 0.81
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = -1
Query: 706 T*PCREQTATTLPPSPGTNTRSVTQTGWRSWSQSWAKFLAENVGWDSPTRQTFKSFSSPP 527
T P T T PP+ T T + T G + S SPT QT + P
Sbjct: 488 TTPTPVPTTTNTPPANPT-TATPTTVGTMTPSTGTTTVPVPTTT-GSPTTQTTAPVTKPT 545
Query: 526 VANNVSSLQTLILS--SFPPVKISSFASSPHTLTVPLDTADTNVLFTFPRPTTCPS 365
V ++ + + + S PPV +S ++ T TVP+ T T V + PTT P+
Sbjct: 546 VPSSTTQTAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTT--TVVPSSATVPTTPPT 599
>Z96047-5|CAB09415.1| 379|Caenorhabditis elegans Hypothetical
protein DY3.6 protein.
Length = 379
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 625 WRSWSQSWAKFLAENVGWDSPTRQTFKSFSSPPVANNVSSLQTLILSSFPPVKISSFASS 446
WR+ ++W + N GW+ + + S P VSS TL+ SS P + S +S+
Sbjct: 8 WRAPGETWVRTPHTN-GWERTKLRPVQISSEPIFIPQVSSSPTLVSSSSPKFILDSGSSA 66
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -2
Query: 705 RSRVGSRRLPP----CPPRRGQTPGRSPRPAGVVGANRGPSSWQRT 580
RS R PP PPRR +P R RPA + +R P +R+
Sbjct: 220 RSSAARRHSPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRS 265
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -2
Query: 705 RSRVGSRRLPP----CPPRRGQTPGRSPRPAGVVGANRGPSSWQRT 580
RS R PP PPRR +P R RPA + +R P +R+
Sbjct: 220 RSSAARRHSPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRS 265
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 568 SPTRQTFKSFSSPPVANNVSSLQTLILS--SFPPVKISSFASSPHTLTVPLDTADTNVLF 395
SPT QT + P V ++ + + + S PPV +S ++ T TVP+ T T V
Sbjct: 588 SPTTQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTT--TVVPS 645
Query: 394 TFPRPTTCPS 365
+ PTT P+
Sbjct: 646 SATVPTTPPT 655
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -2
Query: 705 RSRVGSRRLPP----CPPRRGQTPGRSPRPAGVVGANRGPSSWQRT 580
RS R PP PPRR +P R RPA + +R P +R+
Sbjct: 220 RSSAARRHSPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRS 265
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -2
Query: 705 RSRVGSRRLPP----CPPRRGQTPGRSPRPAGVVGANRGPSSWQRT 580
RS R PP PPRR +P R RPA + +R P +R+
Sbjct: 220 RSSAARRHSPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRS 265
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Frame = +3
Query: 405 LVSAVSSGTVRVWGDDANED----IFTGGK--LDRMRVCSDDTLFATGGEENDLKVWRV 563
L + G+V+++ + NED +F+G K ++ + SD LFATGG++ + +W +
Sbjct: 75 LAIGYADGSVKLFNQE-NEDSEPIMFSGHKKAVNCIEFSSDGLLFATGGKDGVIVLWDI 132
>AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical
protein F49F1.9 protein.
Length = 210
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 708 SRSRVGSRRLPPCPPRRGQTPGRSPRPAGVVGANRGP 598
S R G R PP PPR + P +P+P + GP
Sbjct: 41 SGRRGGGRHRPPRPPRPPRPPRPTPKPVENMETLHGP 77
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 535 SPPVANNVSSLQTLILSSFPPVKISSFASSPHTLTVPLDTADTNVLFTFPRPTT 374
+PPV + + T ++S P + ++SP T+ TA T+ T PTT
Sbjct: 228 TPPVTTSTMATTTANVTSAAPNTTVTISTSPTTVVTVPSTAQTSSTTTVTVPTT 281
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 468 KYLHSHHRPIL*RCHLTRLIPMYCSLSPDLRHVLLHSRLYKYTCFLVKCGK 316
K +HS +P +C ++ + S +H+ +HS Y+C CGK
Sbjct: 158 KRIHSGEKPF--QCTHNGCTKLFANSSDRKKHMHVHSSHKPYSCMYPDCGK 206
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 468 KYLHSHHRPIL*RCHLTRLIPMYCSLSPDLRHVLLHSRLYKYTCFLVKCGK 316
K +HS +P +C ++ + S +H+ +HS Y+C CGK
Sbjct: 171 KRIHSGEKPF--QCTHNGCTKLFANSSDRKKHMHVHSSHKPYSCMYPDCGK 219
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 477 GKLDRMRVCSDDTLFATGGEENDLKVWRVGESQ 575
G++ + SDDT FAT G ++ +++WRV ++
Sbjct: 246 GEVHDVEWMSDDT-FATAGSDSKVQIWRVSPNK 277
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 468 KYLHSHHRPIL*RCHLTRLIPMYCSLSPDLRHVLLHSRLYKYTCFLVKCGK 316
K +HS +P +C ++ + S +H+ +HS Y+C CGK
Sbjct: 159 KRIHSGEKPF--QCTHNGCTKLFANSSDRKKHMHVHSSHKPYSCMYPDCGK 207
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = -1
Query: 658 GTNTRSVTQTGWRSWSQSWAKFLAEN--VGWDSP-TRQTFKSFSSPPVANNVSSLQTL-- 494
GT T+ GWR W + K+ ++ + P T T + S V+++ +S T
Sbjct: 196 GTFKPHGTRKGWRMWKKVTPKYAGKSSVTTTEVPVTSTTIPTEPSTSVSSSSTSASTTPE 255
Query: 493 --ILSSFPPVKISSFASSPHTLTV-PLDTADTNVLFTFPRPTT 374
I+ +++ ++S T T P TA T T PTT
Sbjct: 256 LPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTEEPTT 298
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = -1
Query: 658 GTNTRSVTQTGWRSWSQSWAKFLAEN--VGWDSP-TRQTFKSFSSPPVANNVSSLQTL-- 494
GT T+ GWR W + K+ ++ + P T T + S V+++ +S T
Sbjct: 196 GTFKPHGTRKGWRMWKKVTPKYAGKSSVTTTEVPVTSTTIPTEPSTSVSSSSTSASTTPE 255
Query: 493 --ILSSFPPVKISSFASSPHTLTV-PLDTADTNVLFTFPRPTT 374
I+ +++ ++S T T P TA T T PTT
Sbjct: 256 LPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTEEPTT 298
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = -1
Query: 658 GTNTRSVTQTGWRSWSQSWAKFLAEN--VGWDSP-TRQTFKSFSSPPVANNVSSLQTL-- 494
GT T+ GWR W + K+ ++ + P T T + S V+++ +S T
Sbjct: 196 GTFKPHGTRKGWRMWKKVTPKYAGKSSVTTTEVPVTSTTIPTEPSTSVSSSSTSASTTPE 255
Query: 493 --ILSSFPPVKISSFASSPHTLTV-PLDTADTNVLFTFPRPTT 374
I+ +++ ++S T T P TA T T PTT
Sbjct: 256 LPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTEEPTT 298
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = -1
Query: 658 GTNTRSVTQTGWRSWSQSWAKFLAEN--VGWDSP-TRQTFKSFSSPPVANNVSSLQTL-- 494
GT T+ GWR W + K+ ++ + P T T + S V+++ +S T
Sbjct: 196 GTFKPHGTRKGWRMWKKVTPKYAGKSSVTTTEVPVTSTTIPTEPSTSVSSSSTSASTTPE 255
Query: 493 --ILSSFPPVKISSFASSPHTLTV-PLDTADTNVLFTFPRPTT 374
I+ +++ ++S T T P TA T T PTT
Sbjct: 256 LPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTEEPTT 298
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +3
Query: 405 LVSAVSSGTVRVWGDD---ANEDIFTGGKLDRMRVC---SDDTLFATGGEENDLKVWRVG 566
++S+ V++W D A + F G M++ D+ FAT + +KVW+ G
Sbjct: 114 VISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFG 173
Query: 567 ESQPTFS 587
+ P F+
Sbjct: 174 SNVPNFT 180
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 507 DDTLFATGGEENDLKVWRV 563
D FATGG + ++K+W+V
Sbjct: 302 DGETFATGGSDRNIKIWKV 320
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 566 RVPANVLCQELGPRLAPTTPAGLGDRPGVCPRRGGQGGSR 685
R+PA L P +P G G RRGG G+R
Sbjct: 173 RIPARALSPRKTPPRRNASPGGDGGGGSPAARRGGSAGNR 212
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 708 SRSRVGSRRLPPCPPRRGQTPGRSPRPAGVVGANRGPSSWQRTLAGTRRRAKLSNR 541
S +R + R PP +R ++P RSP P R S+ R+ +G+ R+ S+R
Sbjct: 514 SEARRSNSRSPPRDHKRSRSPSRSPSPR---RRQRSSSNSSRS-SGSSSRSSSSSR 565
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = -1
Query: 691 EQTATTLPPSPGTNTRSVTQTGWRSWSQSWAKFLAENVGWDSPTRQTFKSFSSP--PVAN 518
E T+PP P + G S S+ W K E S + + + SS A
Sbjct: 1712 EPIVVTIPP-PAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAPSSAGSSQAK 1770
Query: 517 NVSSLQTLILSSFPPVKISSFASSPHTLTVP 425
S+ ++I PP +I + S LT+P
Sbjct: 1771 ESSTTSSVISDQTPPYEIDTRNESSWKLTIP 1801
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = -1
Query: 691 EQTATTLPPSPGTNTRSVTQTGWRSWSQSWAKFLAENVGWDSPTRQTFKSFSSP--PVAN 518
E T+PP P + G S S+ W K E S + + + SS A
Sbjct: 1712 EPIVVTIPP-PAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAPSSAGSSQAK 1770
Query: 517 NVSSLQTLILSSFPPVKISSFASSPHTLTVP 425
S+ ++I PP +I + S LT+P
Sbjct: 1771 ESSTTSSVISDQTPPYEIDTRNESSWKLTIP 1801
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = -1
Query: 691 EQTATTLPPSPGTNTRSVTQTGWRSWSQSWAKFLAENVGWDSPTRQTFKSFSSP--PVAN 518
E T+PP P + G S S+ W K E S + + + SS A
Sbjct: 533 EPIVVTIPP-PAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAPSSAGSSQAK 591
Query: 517 NVSSLQTLILSSFPPVKISSFASSPHTLTVP 425
S+ ++I PP +I + S LT+P
Sbjct: 592 ESSTTSSVISDQTPPYEIDTRNESSWKLTIP 622
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = -1
Query: 691 EQTATTLPPSPGTNTRSVTQTGWRSWSQSWAKFLAENVGWDSPTRQTFKSFSSP--PVAN 518
E T+PP P + G S S+ W K E S + + + SS A
Sbjct: 533 EPIVVTIPP-PAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAPSSAGSSQAK 591
Query: 517 NVSSLQTLILSSFPPVKISSFASSPHTLTVP 425
S+ ++I PP +I + S LT+P
Sbjct: 592 ESSTTSSVISDQTPPYEIDTRNESSWKLTIP 622
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = -1
Query: 691 EQTATTLPPSPGTNTRSVTQTGWRSWSQSWAKFLAENVGWDSPTRQTFKSFSSP--PVAN 518
E T+PP P + G S S+ W K E S + + + SS A
Sbjct: 1712 EPIVVTIPP-PAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAPSSAGSSQAK 1770
Query: 517 NVSSLQTLILSSFPPVKISSFASSPHTLTVP 425
S+ ++I PP +I + S LT+P
Sbjct: 1771 ESSTTSSVISDQTPPYEIDTRNESSWKLTIP 1801
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = -1
Query: 691 EQTATTLPPSPGTNTRSVTQTGWRSWSQSWAKFLAENVGWDSPTRQTFKSFSSP--PVAN 518
E T+PP P + G S S+ W K E S + + + SS A
Sbjct: 1712 EPIVVTIPP-PAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAPSSAGSSQAK 1770
Query: 517 NVSSLQTLILSSFPPVKISSFASSPHTLTVP 425
S+ ++I PP +I + S LT+P
Sbjct: 1771 ESSTTSSVISDQTPPYEIDTRNESSWKLTIP 1801
>Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical
protein T05C12.4 protein.
Length = 630
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 396 SLSPDLRHVLLHSRLYKYTCFLVKCGKLVSVGFSFQSKFQFVLCYPIPCKLY 241
S +P+L + LHSRL + C L C +++ F F F++ C +Y
Sbjct: 413 SYNPNLTYFSLHSRLLVFICRLAFCFVALALLFVILPTF-FLVVAGTGCYIY 463
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 516 LFATGGEENDLKVWRVGESQPTFSAKNLAHDWLQLRQPVWVTDLVFVPGEGGRVVAVCSR 695
L TGGE+ KVW G Q F++ HD+ + W TD ++ +C +
Sbjct: 200 LIVTGGEDLKFKVWD-GFGQILFNSS--VHDY-PITSISWNTDGTLFAVGSHNILRLCDK 255
Query: 696 HGY 704
G+
Sbjct: 256 SGW 258
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 708 SRSRVGSRRLPPCPPRRGQTPGRSPRPAGVVGANRGPSSWQRTLAGTRRRAKLSNR 541
S +R + R PP +R ++P RSP P R S+ R+ +G+ R+ S+R
Sbjct: 514 SEARRSNSRSPPRDHKRSRSPSRSPSPR---RRQRSSSNSSRS-SGSSSRSSSSSR 565
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 516 LFATGGEENDLKVWRVGESQPTFSAKNLAHDWLQLRQPVWVTDLVFVPGEGGRVVAVCSR 695
L TGGE+ KVW G Q F++ HD+ + W TD ++ +C +
Sbjct: 200 LIVTGGEDLKFKVWD-GFGQILFNSS--VHDY-PITSISWNTDGTLFAVGSHNILRLCDK 255
Query: 696 HGY 704
G+
Sbjct: 256 SGW 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,273,244
Number of Sequences: 27780
Number of extensions: 388646
Number of successful extensions: 1420
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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