Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10d05
         (204 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P24646 Cluster: Polyhedrin; n=212; root|Rep: Polyhedrin...    47   9e-05
UniRef50_Q54KA6 Cluster: Putative uncharacterized protein; n=1; ...    38   0.056
UniRef50_Q54Q70 Cluster: Putative cell surface glycoprotein; n=1...    33   0.92 
UniRef50_A0DH03 Cluster: Chromosome undetermined scaffold_5, who...    33   1.2  
UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:...    31   3.7  
UniRef50_Q8IB10 Cluster: Putative uncharacterized protein MAL8P1...    31   4.9  
UniRef50_Q6JPH0 Cluster: Polyhedrin, major occlusion body protei...    31   6.5  
UniRef50_Q16QG7 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q8XAQ6 Cluster: Putative uncharacterized protein; n=1; ...    30   8.5  
UniRef50_Q73BQ4 Cluster: Putative uncharacterized protein; n=1; ...    30   8.5  
UniRef50_Q1DY85 Cluster: Putative uncharacterized protein; n=1; ...    30   8.5  

>UniRef50_P24646 Cluster: Polyhedrin; n=212; root|Rep: Polyhedrin
          - Spodoptera littoralis nuclear polyhedrosis virus
          (SlNPV)
          Length = 249

 Score = 46.8 bits (106), Expect = 9e-05
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -3

Query: 73 YSYTPTIGRTYVYDNKYYKNLG 8
          Y+Y+P +G+TYVYDNKYYKNLG
Sbjct: 8  YNYSPHLGKTYVYDNKYYKNLG 29


>UniRef50_Q54KA6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 626

 Score = 37.5 bits (83), Expect = 0.056
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = -3

Query: 190 SNLFFINDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNYSYTPTIGRTYVYDNKYYKN 14
           + L+F N++N NNN+  NK   +   ++     PI +PN  +   IGR Y Y+NK   N
Sbjct: 459 TGLYFSNNSNNNNNNNNNK---FDIWDTTYYTFPIKLPNLKFLKIIGRDY-YNNKNNNN 513


>UniRef50_Q54Q70 Cluster: Putative cell surface glycoprotein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative cell surface
           glycoprotein - Dictyostelium discoideum AX4
          Length = 880

 Score = 33.5 bits (73), Expect = 0.92
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 172 NDTNGNNNHLANK*VFYCFRNS-FVIKKPINM-PNYSYTPTIGRTYVYDNKYY 20
           N+ N NNN+  N  V++   NS FVI+ PI +  N+S T T   T +    YY
Sbjct: 488 NNYNSNNNNNNNNNVYFIIPNSKFVIEIPIGVGVNHSTTFTFENTKISKTLYY 540


>UniRef50_A0DH03 Cluster: Chromosome undetermined scaffold_5, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_5, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2443

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +1

Query: 16   FCNIYCRTR----KYARWWGCMNNSAY 84
            +CNI+ RTR      A +WGCMN S Y
Sbjct: 1648 YCNIWYRTRYSCENIANYWGCMNTSMY 1674


>UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:
           PxORF43 peptide - Plutella xylostella granulovirus
          Length = 414

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
 Frame = -3

Query: 202 FFLMSNLFF-INDTNGNNNHLANK*VFYCFRNSFVIKK----PINMPNYSYTPTIGRTYV 38
           + L+ ++F  +N+ +G N H+      YC   +  I      PIN+P  + +P +  T  
Sbjct: 334 YHLVPDVFIELNNISGANKHVR----LYCKYMALAITNRGLVPINLPTNNPSPPVATTPT 389

Query: 37  YDNKYYKNLG 8
            D ++Y  LG
Sbjct: 390 LDERFYTQLG 399


>UniRef50_Q8IB10 Cluster: Putative uncharacterized protein
           MAL8P1.74; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL8P1.74 - Plasmodium
           falciparum (isolate 3D7)
          Length = 701

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/54 (25%), Positives = 32/54 (59%)
 Frame = -3

Query: 172 NDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNYSYTPTIGRTYVYDNKYYKNL 11
           N++N NNN   ++ +F CF N F+++K + + ++ +  T+   + + N +  N+
Sbjct: 69  NNSNNNNNDNNSEILFNCFIN-FLLRKSLKIASFDFDGTLINKH-FSNNHKNNI 120


>UniRef50_Q6JPH0 Cluster: Polyhedrin, major occlusion body
          protein; n=4; Nucleopolyhedrovirus|Rep: Polyhedrin,
          major occlusion body protein - Neodiprion lecontii NPV
          Length = 247

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 58 TIGRTYVYDNKYYKNLG 8
          T  ++Y+YDNKYY+ LG
Sbjct: 11 TSAKSYIYDNKYYRGLG 27


>UniRef50_Q16QG7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 198

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -3

Query: 202 FFLMSNLFFINDTNG----NNNHLANK*VFYCFRNSFVIKK 92
           FFL  N FF+   NG    NN  +  +  F C +NSF ++K
Sbjct: 100 FFLAKNKFFLTKNNGFFLQNNIFVLQRTSFSCRKNSFFLQK 140


>UniRef50_Q8XAQ6 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli O157:H7|Rep: Putative uncharacterized
           protein - Escherichia coli O157:H7
          Length = 270

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 109 SFVIKKPINMPNYSYTPTI-GRTYVYDNKYYKNLGCL 2
           S  IKK     NY+  PT  G +Y YDNKY+ ++  L
Sbjct: 178 SHTIKKIDAFSNYAQHPTQEGCSYFYDNKYFNSVDML 214


>UniRef50_Q73BQ4 Cluster: Putative uncharacterized protein; n=1;
           Bacillus cereus ATCC 10987|Rep: Putative uncharacterized
           protein - Bacillus cereus (strain ATCC 10987)
          Length = 36

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +2

Query: 98  YYKTVTKTVKYLFICEMVIISICIVNKKQ 184
           ++K+VTKT++   IC  +I+  CI N+K+
Sbjct: 9   FFKSVTKTIEIYVIC-YIIVKNCIFNEKR 36


>UniRef50_Q1DY85 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 681

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 4   DSPSFCNIYCRTRKYARWWGCMNNSAYL 87
           D PS   IY  T+ Y  WW  + +S  L
Sbjct: 283 DRPSIAEIYASTKPYPTWWSDLEDSRVL 310


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,212,261
Number of Sequences: 1657284
Number of extensions: 3788455
Number of successful extensions: 12272
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12226
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 9954893260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)