BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmnc10d01 (721 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 36 0.032 01_05_0011 + 17133501-17133738,17135335-17135607,17145224-171453... 28 6.5 >10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429, 10791796-10791903,10793133-10797686,10798347-10798461, 10799597-10799724,10799843-10800043,10800158-10800227, 10801233-10801314,10801433-10801556,10801761-10801778 Length = 1960 Score = 35.9 bits (79), Expect = 0.032 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = +2 Query: 461 EIENDKIYKLVETVDSSNKLSRRQVDFL-IHALLNNVSVTFTLHRFVDDNVLTQDELSFL 637 ++ DK +VE++DSS ++ + Q D L + LL N L VDD T+DE+ L Sbjct: 1404 QVGTDKSRDIVESIDSSERVLKYQDDILQLKVLLTN------LEEQVDDLRSTKDEVEIL 1457 Query: 638 ANFLVTKLDE 667 L +KL+E Sbjct: 1458 NMVLKSKLEE 1467 >01_05_0011 + 17133501-17133738,17135335-17135607,17145224-17145348, 17145463-17145612,17145653-17145696,17145822-17146174, 17146280-17146602,17147010-17147105 Length = 533 Score = 28.3 bits (60), Expect = 6.5 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = -2 Query: 315 KKFFIKLDILTSTYYQSIELVFLFKIASSACSISNFFRTLLAL*LGMSSTLDSVFL 148 KK + L +L + ++ L+F F + A SIS FF ++L L L V L Sbjct: 99 KKSNLFLQVLIDFIHFALALIFNFGLEGEASSISFFFNLYMSLVLIFPKRLAGVIL 154 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,264,066 Number of Sequences: 37544 Number of extensions: 258436 Number of successful extensions: 638 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 628 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 638 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1874582652 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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