BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmnc10c20 (692 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_28433| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15 SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21) 60 2e-09 SB_37377| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09 SB_47523| Best HMM Match : HLH (HMM E-Value=1.1e-18) 55 5e-08 SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21) 53 2e-07 SB_56921| Best HMM Match : HLH (HMM E-Value=9.9e-19) 51 1e-06 SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20) 49 3e-06 SB_535| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06 SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20) 49 4e-06 SB_29722| Best HMM Match : HLH (HMM E-Value=4.9e-14) 46 2e-05 SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05 SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05 SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 44 1e-04 SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04 SB_46206| Best HMM Match : HLH (HMM E-Value=5e-18) 42 4e-04 SB_12345| Best HMM Match : HLH (HMM E-Value=1.4e-12) 42 4e-04 SB_52528| Best HMM Match : HLH (HMM E-Value=3.9e-18) 42 5e-04 SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18) 41 0.001 SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07) 41 0.001 SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003 SB_17519| Best HMM Match : HLH (HMM E-Value=6e-08) 36 0.024 SB_17080| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38 SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15) 31 1.2 SB_3962| Best HMM Match : HLH (HMM E-Value=8.8e-05) 31 1.2 SB_42355| Best HMM Match : EGF (HMM E-Value=2.9e-05) 29 3.6 SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_6113| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 4.7 SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) 28 6.2 SB_34789| Best HMM Match : Sushi (HMM E-Value=6.6) 28 8.3 >SB_28433| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 536 Score = 79.8 bits (188), Expect = 2e-15 Identities = 37/58 (63%), Positives = 47/58 (81%) Frame = +3 Query: 330 PRKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLE 503 P + TN +ERWRQQ+V+ AFAE+R+L+PT+PPDKKLSK EILR A++YI L VLE Sbjct: 438 PSRTVTNKKERWRQQSVNLAFAEIRKLLPTYPPDKKLSKVEILRTAVKYIQFLDGVLE 495 >SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21) Length = 157 Score = 60.1 bits (139), Expect = 2e-09 Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%) Frame = +3 Query: 279 QNISEELSNLNPCLLRPPRKLFT-NCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEI 455 Q + EL + P L P+K +T N +ER R Q ++ AF +LR +P PPD KLSK + Sbjct: 15 QGATSELDS--PELADTPKKRYTANRKERKRTQTMNTAFEDLRNHIPNVPPDTKLSKIKT 72 Query: 456 LRMAIRYIGLLCEVLEWQKN 515 LR+AI YI L ++LE K+ Sbjct: 73 LRLAISYIRYLMDILEESKD 92 >SB_37377| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 181 Score = 58.4 bits (135), Expect = 5e-09 Identities = 28/58 (48%), Positives = 40/58 (68%) Frame = +3 Query: 348 NCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLEWQKNHS 521 N RER R Q+++ AF LR+ +PT P +K+LSK + LR+AI YIG L E++ +HS Sbjct: 49 NLRERKRMQSINEAFEGLRKHIPTLPYEKRLSKVDTLRLAIGYIGFLTEMINSDMSHS 106 >SB_47523| Best HMM Match : HLH (HMM E-Value=1.1e-18) Length = 207 Score = 55.2 bits (127), Expect = 5e-08 Identities = 32/89 (35%), Positives = 47/89 (52%) Frame = +3 Query: 333 RKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLEWQK 512 R+L N RER R +S AF LR+ VP++ D+KLSK ILR+A YI L ++ E Sbjct: 45 RRLIANARERSRIHTMSEAFESLRKAVPSYSQDQKLSKLAILRLATSYISALADLTE--S 102 Query: 513 NHSVTNKENSGSLAIKCESPLSPQSRRLR 599 + S + ++ +C L + R R Sbjct: 103 DTSAKSLKHFAECVEQCTRALQAEGRAKR 131 >SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21) Length = 143 Score = 53.2 bits (122), Expect = 2e-07 Identities = 27/51 (52%), Positives = 33/51 (64%) Frame = +3 Query: 348 NCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVL 500 N RER R +V+ AF LR L+PT P D+KLSK E LR+A YI L +L Sbjct: 56 NARERNRTHSVNAAFNALRLLIPTEPSDRKLSKIETLRLASSYIAHLSTIL 106 >SB_56921| Best HMM Match : HLH (HMM E-Value=9.9e-19) Length = 200 Score = 50.8 bits (116), Expect = 1e-06 Identities = 24/50 (48%), Positives = 35/50 (70%) Frame = +3 Query: 330 PRKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYI 479 P K T+ +ER R +N++ AFAELR+ +P P D KLSK + L++A+ YI Sbjct: 40 PIKTTTSKKERRRTENINAAFAELRKHIPNVPSDTKLSKIKTLQLAMSYI 89 >SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20) Length = 232 Score = 49.2 bits (112), Expect = 3e-06 Identities = 27/59 (45%), Positives = 34/59 (57%) Frame = +3 Query: 348 NCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLEWQKNHSV 524 N RER R + V+ F LR+ VPT P +KKLSK + LR AI YI L +L H + Sbjct: 70 NARERKRVKLVNDGFMRLRKHVPTDPKNKKLSKVKTLRSAIEYIRHLQHLLGQANKHQI 128 >SB_535| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 131 Score = 49.2 bits (112), Expect = 3e-06 Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%) Frame = +3 Query: 303 NLNPCLLRPPRKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIG 482 NL P +R N RER R ++V+ +A LR +P P DK++SK E LR AIRYI Sbjct: 49 NLEPAFIRK-----RNERERIRVRHVNEGYARLREHLPEEPSDKRMSKVETLRAAIRYIK 103 Query: 483 LLCEVLEWQ-KNHSVTNKENS 542 L +L+ + S NK +S Sbjct: 104 HLESLLQAEAAGSSEGNKSDS 124 >SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20) Length = 153 Score = 48.8 bits (111), Expect = 4e-06 Identities = 28/51 (54%), Positives = 33/51 (64%) Frame = +3 Query: 348 NCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVL 500 N RER R + VS FA LR+ +PT P +KKLSK E LR AI YI L +L Sbjct: 77 NERERNRVKLVSDGFAALRKHIPTTPVNKKLSKVETLRTAIEYIKHLQRIL 127 >SB_29722| Best HMM Match : HLH (HMM E-Value=4.9e-14) Length = 106 Score = 46.4 bits (105), Expect = 2e-05 Identities = 25/52 (48%), Positives = 32/52 (61%) Frame = +3 Query: 354 RERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLEWQ 509 RER R QN+ A+ EL++ +P PPD KL + IL +AI YI L VL Q Sbjct: 34 RERIRAQNLKKAYMELQKTLPNVPPDTKLPRLNILLLAIDYISHLTCVLSRQ 85 >SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 495 Score = 46.4 bits (105), Expect = 2e-05 Identities = 24/55 (43%), Positives = 34/55 (61%) Frame = +3 Query: 336 KLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVL 500 +L N ER R ++GA+ +LR+L+P + D KL K +ILR AI YI L +L Sbjct: 437 RLLANEHERRRVAQLNGAYQDLRQLIPGYQCDTKLPKIKILRYAINYIAHLDNIL 491 >SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 175 Score = 44.8 bits (101), Expect = 7e-05 Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = +3 Query: 348 NCRERWRQQNVSGAFAELRRLVPTH--PPDKKLSKNEILRMAIRYIGLLCEVLE 503 N RER R +++S A LR +P DKKLSK + LR+AIRYI L E+L+ Sbjct: 43 NARERNRMRSISDALLHLRYHLPQTVVAKDKKLSKIQTLRLAIRYISDLFEILQ 96 >SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) Length = 189 Score = 44.0 bits (99), Expect = 1e-04 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = +3 Query: 333 RKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLE-WQ 509 ++ N RER R Q ++ LR L+P P +KK SK E + +A YI + E+++ + Sbjct: 63 QRRLANTRERHRVQVLNAYIDRLRHLIPLFPGEKKPSKTETVHLAALYIEHMTEIIQNTE 122 Query: 510 KNHSVTNKENSGS 548 K SV++ + G+ Sbjct: 123 KPPSVSDASSPGT 135 >SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 155 Score = 43.2 bits (97), Expect = 2e-04 Identities = 24/52 (46%), Positives = 32/52 (61%) Frame = +3 Query: 348 NCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLE 503 N RER R + V+ F+ LR+ +P P KKLSK E LR A+ YI L ++E Sbjct: 76 NERERNRVRLVNDGFSSLRQHIPYFPEKKKLSKVETLRCAVAYIKHLQSLIE 127 >SB_46206| Best HMM Match : HLH (HMM E-Value=5e-18) Length = 400 Score = 42.3 bits (95), Expect = 4e-04 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Frame = +3 Query: 309 NPCLLRPP----RKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRY 476 +PC+ P R+L N RER R ++++ A L++ +P ++++K EILR+A Y Sbjct: 292 SPCVKAEPMKRIRRLRANDRERRRMKSLNRALDSLKKCIPVPQSKRRVTKLEILRIACNY 351 Query: 477 IGLLCEVLEWQKN 515 I L + L + + Sbjct: 352 IKSLSDTLRGESS 364 >SB_12345| Best HMM Match : HLH (HMM E-Value=1.4e-12) Length = 124 Score = 42.3 bits (95), Expect = 4e-04 Identities = 21/57 (36%), Positives = 34/57 (59%) Frame = +3 Query: 333 RKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLE 503 ++ N RER R ++ LR L+P P +K+ +K EI+ MA +YI LL +++E Sbjct: 48 QRRLANARERNRVHILNTNIQVLRELIPLPPQEKEPTKTEIIWMAAKYIALLSDMVE 104 >SB_52528| Best HMM Match : HLH (HMM E-Value=3.9e-18) Length = 138 Score = 41.9 bits (94), Expect = 5e-04 Identities = 23/51 (45%), Positives = 31/51 (60%) Frame = +3 Query: 348 NCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVL 500 N RER R Q V+ AF LR +P +KK SK + +R+A RYI L ++L Sbjct: 41 NERERNRVQQVNAAFETLRNKIPLRALEKKPSKIDTIRLATRYIQDLTQLL 91 >SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18) Length = 179 Score = 40.7 bits (91), Expect = 0.001 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Frame = +3 Query: 318 LLRPPRKLFTNCRERWRQQNVSGAFAELRRLVPTHPPD-KKLSKNEILRMAIRYIGLL 488 LL R+L + RER R+ ++ A LR+ VP + +KLSK E+LR+AI YI +L Sbjct: 34 LLDRSRRLKASARERKRRHVLNNALELLRKKVPCVDQNPQKLSKIEVLRLAIDYIAML 91 >SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07) Length = 105 Score = 40.7 bits (91), Expect = 0.001 Identities = 23/54 (42%), Positives = 30/54 (55%) Frame = +3 Query: 333 RKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCE 494 RK R+R R+ + A L L+P P++KLSKN IL+ AI YI L E Sbjct: 36 RKFVLISRQRKREYAIREALNHLNSLLPLDNPNRKLSKNMILQTAIEYIRSLQE 89 >SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 783 Score = 39.5 bits (88), Expect = 0.003 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%) Frame = +3 Query: 336 KLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLEWQKN 515 +L NC ++++ ++ LR LVP+ ++SK +++ AI+YI L + L Q + Sbjct: 439 RLLKNCVRSYKRKIKMMEYSRLRSLVPSVASKSRVSKIQVIEEAIKYIAQLQDALRTQPD 498 Query: 516 HSVTNK-ENSGSLAIKCESPLSP-QSRRLRL 602 S + NS + + E P S + +R R+ Sbjct: 499 SSSRGESSNSNTESATVEKPRSSVREKRQRI 529 >SB_17519| Best HMM Match : HLH (HMM E-Value=6e-08) Length = 125 Score = 36.3 bits (80), Expect = 0.024 Identities = 27/86 (31%), Positives = 41/86 (47%) Frame = +3 Query: 357 ERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLEWQKNHSVTNKE 536 ER N+S + L+ +VP P +++SK EIL+ I YI L LE + N+ Sbjct: 36 ERDSNDNMSECYERLKNMVPNVPVGRRISKVEILQYVIDYILDLQTALE----NQTANRR 91 Query: 537 NSGSLAIKCESPLSPQSRRLRLKRQC 614 S + SPLS S +++ C Sbjct: 92 RRRSNRVN-RSPLSTISLNEDIEKVC 116 >SB_17080| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 313 Score = 32.3 bits (70), Expect = 0.38 Identities = 25/85 (29%), Positives = 41/85 (48%) Frame = +3 Query: 300 SNLNPCLLRPPRKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYI 479 S+ P ++L N +ER R Q ++ AF +LRR++P K+ ++L A ++I Sbjct: 11 SSSPPSPTESSKRLEANKKERMRVQKMNNAFQDLRRVLPKCESQTKI---DLLSSAKKHI 67 Query: 480 GLLCEVLEWQKNHSVTNKENSGSLA 554 E L Q +T EN L+ Sbjct: 68 ----EYLTAQLQTHLTGSENQVELS 88 >SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15) Length = 272 Score = 30.7 bits (66), Expect = 1.2 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Frame = +3 Query: 357 ERWRQQNVSGAFAELRRLVPT---HPPDKKLSKNEILRMAIRYI 479 E+ R+ ++ ELRRLVPT KL K EIL + + ++ Sbjct: 20 EKKRRDRINRCLVELRRLVPTALEKEGSSKLEKAEILHLTVEHL 63 >SB_3962| Best HMM Match : HLH (HMM E-Value=8.8e-05) Length = 149 Score = 30.7 bits (66), Expect = 1.2 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 354 RERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLL 488 R+R R + A+ +LR +VP KK++K + ++ YI L Sbjct: 88 RDRLRSEAEQNAYKKLREIVPALKEQKKVTKLDTIQQTCEYIEYL 132 >SB_42355| Best HMM Match : EGF (HMM E-Value=2.9e-05) Length = 241 Score = 29.1 bits (62), Expect = 3.6 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +3 Query: 474 YIGLLCEVLEWQKNHSVTNKENSGSLAIKCESPLSPQSRRLRLKRQC 614 Y+G C+ L+ + + + ENS S A + ES L P S + RL R C Sbjct: 188 YMGKNCDDLK-SSSVACESTENSISTARELESNLVPSSSKRRLGRTC 233 >SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1845 Score = 29.1 bits (62), Expect = 3.6 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Frame = +3 Query: 429 DKKLSKNEILRMAIRYIGLLCEVLEWQKNHSVTNKENSG-----SLAIKCESPLSPQSRR 593 ++K + I + R + +L L Q+ + E+ G L++ E P SP S Sbjct: 841 EEKCTSKSINELKERRLNILQSALHCQEGKNKIIHEDDGINPKQDLSLLSEKPSSPGSSH 900 Query: 594 L-RLKRQC--FDEDGPRAKLYHDQEEYFR 671 + + C D DGP + HD++ Y + Sbjct: 901 VGNFQGICDKMDVDGPSHNMPHDEQHYHK 929 >SB_6113| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 109 Score = 29.1 bits (62), Expect = 3.6 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = +3 Query: 492 EVLEWQKNHSVTNKENSGSLAIKCESPLSPQSRRLRLKRQCFDE 623 +V+E NH+V KE +L ++ + LS ++R KRQC D+ Sbjct: 49 KVIENTPNHTV--KEFGHTLPVQIKEALSSKAREFDKKRQCQDK 90 >SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) Length = 2122 Score = 28.7 bits (61), Expect = 4.7 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +3 Query: 396 ELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLEWQKNHSVTNKENSG 545 EL LV H + +N + R + + L CE+ Q+N S+ + E G Sbjct: 356 ELEELVHQHEVENSSLRNNLTRTSSQVTKLKCELDNAQRNKSIGSAELGG 405 >SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) Length = 468 Score = 28.3 bits (60), Expect = 6.2 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 333 RKLFTNCRERWRQQNVSGAFAELRRLVPTHPPD-KKLSKNEILRMAIRYI 479 R+ N E+ R+ ++ EL +VP KKL K +L+MA+ Y+ Sbjct: 138 RRTTRNESEKRRRDKLNVYITELAAMVPMCASSRKKLDKTTVLQMAVNYM 187 >SB_34789| Best HMM Match : Sushi (HMM E-Value=6.6) Length = 286 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +3 Query: 351 CRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEIL 458 C E W++ N++G R P PP + +S E++ Sbjct: 175 CYENWQKGNMTGPSITPRGTPPKLPPRRVISNKELI 210 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,144,480 Number of Sequences: 59808 Number of extensions: 430854 Number of successful extensions: 1348 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1294 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1348 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1805522550 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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