Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c18
         (259 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   0.70 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    19   6.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    19   6.5  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 0.70
 Identities = 13/51 (25%), Positives = 19/51 (37%)
 Frame = -2

Query: 189 KYMYN*LNSIFLYLQFSFCSANVIASDNGTRPCNIKANNFNKLLCNVVLSL 37
           + M N L  I+ Y  F F          GT        NF  +   ++LS+
Sbjct: 311 RQMKNNLERIYFYWSFGFLIIQRFIHQIGTLEVAFTGKNFFSITRGLILSI 361


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 186 YMYN*LNSIFLYLQFSFC 133
           Y++   N   LYL FS+C
Sbjct: 145 YVFFVENEPILYLIFSYC 162


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 28  SEPKREHYIAQ*FVKI 75
           +EPK  HY+   FV +
Sbjct: 89  NEPKLRHYLIFIFVNV 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,977
Number of Sequences: 336
Number of extensions: 731
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4058134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)