Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c16
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.0  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   4.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.1  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 118 KKFLNMASSRLERIGTIFTRVEGLLSRG 201
           +KF +MAS+R  R   IF+ +  L  RG
Sbjct: 175 QKFKDMASTRYARQTFIFSAIPFLRDRG 202


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = -3

Query: 296 TTRLGRAYLGSVIGGKALYTSNHKGLSSGFIAPRLRRPSTLVNIVPIL 153
           T  L R Y          YT   +G +  +   R   PST+ NI+ +L
Sbjct: 845 TLLLQRGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIANIMDLL 892


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = -3

Query: 296 TTRLGRAYLGSVIGGKALYTSNHKGLSSGFIAPRLRRPSTLVNIVPIL 153
           T  L R Y          YT   +G +  +   R   PST+ NI+ +L
Sbjct: 845 TLLLQRGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIANIMDLL 892


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = -3

Query: 296 TTRLGRAYLGSVIGGKALYTSNHKGLSSGFIAPRLRRPSTLVNIVPIL 153
           T  L R Y          YT   +G +  +   R   PST+ NI+ +L
Sbjct: 845 TLLLQRGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIANIMDLL 892


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = -3

Query: 296 TTRLGRAYLGSVIGGKALYTSNHKGLSSGFIAPRLRRPSTLVNIVPIL 153
           T  L R Y          YT   +G +  +   R   PST+ NI+ +L
Sbjct: 845 TLLLQRGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIANIMDLL 892


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 17  DLIKIPSLDLIKKSKKRLFVCISETYLNRANN 112
           DL+  PS  L K   + LF C+ E ++   N+
Sbjct: 135 DLVTRPSYRLRKFFDELLFKCMKEKWIPLCNS 166


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 17  DLIKIPSLDLIKKSKKRLFVCISETYLNRANN 112
           DL+  PS  L K   + LF C+ E ++   N+
Sbjct: 368 DLVTRPSYRLRKFFDELLFKCMKEKWIPLCNS 399


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 17  DLIKIPSLDLIKKSKKRLFVCISETYLNRANN 112
           DL+  PS  L K   + LF C+ E ++   N+
Sbjct: 368 DLVTRPSYRLRKFFDELLFKCMKEKWIPLCNS 399


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = -2

Query: 102 RLRYVSLMQTNNLFLDFFIKSKLG 31
           ++R+V L +  N  +++F K+K+G
Sbjct: 465 KIRFVILNKQINNLIEYFQKNKIG 488


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = -2

Query: 102 RLRYVSLMQTNNLFLDFFIKSKLG 31
           ++R+V L +  N  +++F K+K+G
Sbjct: 190 KIRFVILNKQINNLIEYFQKNKIG 213


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/41 (21%), Positives = 17/41 (41%)
 Frame = +2

Query: 71  FVCISETYLNRANNFRKNFLTWPVADWKELVQYLPELKVFL 193
           + C++++ LN       N   +   D     +Y   LK+ L
Sbjct: 266 YTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHL 306


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/41 (21%), Positives = 17/41 (41%)
 Frame = +2

Query: 71  FVCISETYLNRANNFRKNFLTWPVADWKELVQYLPELKVFL 193
           + C++++ LN       N   +   D     +Y   LK+ L
Sbjct: 24  YTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHL 64


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 631 NQYTT*TVVLYYCSYII 681
           N+Y     VLY CSY +
Sbjct: 169 NEYVQAIEVLYICSYTV 185


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -2

Query: 309 SYFFDYKIRTCIFRFGDW 256
           S+ +DY + T +    DW
Sbjct: 271 SHLYDYDLTTHVMLLSDW 288


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -2

Query: 309 SYFFDYKIRTCIFRFGDW 256
           S+ +DY + T +    DW
Sbjct: 271 SHLYDYDLTTHVMLLSDW 288


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = -3

Query: 296 TTRLGRAYLGSVIGGKALYTSNHKGLSSGFIAPRLRRPSTLVNIVPIL 153
           T  L R Y          +T   +G +  +   R   PST+ NI+ +L
Sbjct: 585 TLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWMPSTMANILDLL 632


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = -3

Query: 296 TTRLGRAYLGSVIGGKALYTSNHKGLSSGFIAPRLRRPSTLVNIVPIL 153
           T  L R Y          +T   +G +  +   R   PST+ NI+ +L
Sbjct: 818 TLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWMPSTMANILDLL 865


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = -3

Query: 296 TTRLGRAYLGSVIGGKALYTSNHKGLSSGFIAPRLRRPSTLVNIVPIL 153
           T  L R Y          +T   +G +  +   R   PST+ NI+ +L
Sbjct: 818 TLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWMPSTMANILDLL 865


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,160
Number of Sequences: 336
Number of extensions: 3044
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)