Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c16
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    26   1.3  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    25   1.7  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   2.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.9  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   3.9  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   3.9  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   6.7  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   8.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   8.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.9  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 303 FFDYKIRTCIFRFGDW 256
           +F Y ++TC+ + G W
Sbjct: 158 YFPYDVQTCVLKLGSW 173


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 303 FFDYKIRTCIFRFGDW 256
           +F Y  +TC+ +FG W
Sbjct: 160 YFPYDEQTCLMKFGSW 175


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 303 FFDYKIRTCIFRFGDW 256
           +F +  +TCI +FG W
Sbjct: 157 YFPFDQQTCIMKFGSW 172


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 295 VKEIRPILYKEDVLRAKFHSNGYGLAPVSLLNQSNETQTKRLVQQYDKLK 444
           +K++   L + +V RA F +    +A  S    SN    + LVQ+YD+LK
Sbjct: 343 IKKLVDELQEVEVKRAAFENE---VAGESKKRGSNVHLERDLVQEYDRLK 389


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 303 FFDYKIRTCIFRFGDW 256
           +F +  +TC+ +FG W
Sbjct: 158 YFPFDEQTCVLKFGSW 173


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 303 FFDYKIRTCIFRFGDW 256
           +F +  +TC+ +FG W
Sbjct: 154 YFPFDEQTCVMKFGSW 169


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/51 (19%), Positives = 27/51 (52%)
 Frame = +1

Query: 361 YGLAPVSLLNQSNETQTKRLVQQYDKLKAEGIPEDEIIEKAAQAVAVERHS 513
           YGL  + ++ ++N  +T +L+Q+ ++   + +       K  Q  ++++ S
Sbjct: 138 YGLQQLHVMERNNWKETHQLIQECEQDHVQRLSNQRSHYKRIQCYSLKQRS 188


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 303 FFDYKIRTCIFRFGDW 256
           +F +  +TC  +FG W
Sbjct: 166 YFPFDQQTCFMKFGSW 181


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 303 FFDYKIRTCIFRFGDW 256
           +F +  +TC  +FG W
Sbjct: 154 YFPFDEQTCFMKFGSW 169


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 265 EPKYARPNLVVKEIRPILYKEDVLRAKFHSNGYGLAPVSLLNQSNETQTK 414
           EP Y+ P+LV+ E +P+    D  R ++ S  +G    SL+    E   K
Sbjct: 182 EPNYSEPHLVILE-QPV----DKFRFRYQSEMHG-THGSLMGSRTEKSKK 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,481
Number of Sequences: 2352
Number of extensions: 12545
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)