Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c11
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   1.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.7  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 286 YNKFYPNNTNLIDFTNWI 339
           YNK +PN+ N I+  N++
Sbjct: 361 YNKNHPNSENYINHQNYV 378


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 75  IFVINWLLHITKNVQYLFYNIILLSIQT 158
           IF++NW   +   +     N+I L IQT
Sbjct: 87  IFLVNWYPRLIIGIMNSTLNLIFLLIQT 114


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 286 YNKFYPNNTNLIDFTNWI 339
           YNK +PN+ N I+  N++
Sbjct: 309 YNKNHPNSENYINHQNYV 326


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 60  GLFASIFVINWLLHITKNVQYLFY 131
           G F S+F+ + +    KN+Q L Y
Sbjct: 444 GTFNSVFICDLIEQKVKNIQMLVY 467


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 222 DLHSFPYTIESV 187
           D HSFP+T ES+
Sbjct: 248 DSHSFPFTAESL 259


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 96  LHITKNVQYLFYNIILLSIQTTDTDRLFIQLQILWYRGRNE 218
           L IT    +   N +LLSI    +  LFI +Q+     +NE
Sbjct: 405 LEITACKFFSIDNALLLSICGASSSYLFIMIQLDLGNKKNE 445


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,747
Number of Sequences: 336
Number of extensions: 2990
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)