Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10c10
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 78 7e-15
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 38 0.009
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 34 0.083
AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical... 31 0.59
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 3.1
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 29 3.1
L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger pro... 29 3.1
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 29 3.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 5.5
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 5.5
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.5
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.5
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 28 5.5
Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 28 7.2
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 28 7.2
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 28 7.2
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.2
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z50742-4|CAA90617.1| 498|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 27 9.6
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 27 9.6
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 27 9.6
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 77.8 bits (183), Expect = 7e-15
Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Frame = +3
Query: 141 RRCSKHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQV-ASIHFTNPL 317
R S H + L R QS+ S+ Q P + A T L +P LV + ++ +S +F
Sbjct: 5 RAVSVH-RFLSRAARQSVTAASSAQ-PSLQAK---TSLLEP--LVQNVRITSSANFHMSA 57
Query: 318 LVEQDVTT---PSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIK 488
+ DV T P+F +S+SEGD++ K+ GD V DE+V EIETDKT++ V AP G I
Sbjct: 58 VRMSDVITVEGPAFAESISEGDIRWLKQKGDHVNEDELVAEIETDKTSVEVPAPQAGTIV 117
Query: 489 ELYVKDGETVKAGQKLFRLE 548
E V+DG V A QKL++L+
Sbjct: 118 EFLVEDGAKVTAKQKLYKLQ 137
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 390 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLFRLEITG 557
K GD+++ + V E+++DK A+ + G++K+LY + + GQ L +EI G
Sbjct: 53 KEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKLYHEVDGMARVGQALIDVEIEG 108
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = +3
Query: 186 QSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVS 365
QS R ST K + P A + ++ + L V P+ ++
Sbjct: 31 QSSRALSTGAAAKSSGLVGQVARQYPNAAAFSIKQVRLYSSGNLPKHNRVALPALSPTME 90
Query: 366 EGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 509
G V KK GD ++ +++ EIETDK + P G + ++ +++G
Sbjct: 91 LGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFETPEEGYLAKILIQEG 139
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 34.3 bits (75), Expect = 0.083
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = -3
Query: 565 GASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFL 386
G++ ++ + F +L S S + TP P ++G++ + S TTS +T S + +
Sbjct: 370 GSTASTTSGSLFSTSLGSSQSPGSSVSTTPGPSTISGISQSTTSGPTTTSEPSTTSGSTV 429
Query: 385 SNLTSPSETESGKLGVVTSCSTSRG 311
S+ + PS T + T+ ST+ G
Sbjct: 430 SDTSGPSTTSGPSTTLGTTQSTTSG 454
>AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical
protein Y38E10A.17 protein.
Length = 586
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 378 KLDKKVGDSVAADEVV-LEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLFRLEIT 554
K+D+KV D++ D VV ++++ +PVM G K+ G VKA ++ ++I
Sbjct: 235 KVDQKVVDAIGKDMVVAVQVDVADNGMPVMKVLEGKPKDKETPVGIIVKANDQVQFVQIV 294
Query: 555 G 557
G
Sbjct: 295 G 295
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -3
Query: 598 TFGASVAAAFLGASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTT 419
TFG + + + + P +S N+ SPS++ G+ T + R+T
Sbjct: 407 TFGTA-KSVIVSSKPSLSGYNN---RANPSPSMSDLRTTKSMAGSTTSLLSERAPKKRST 462
Query: 418 SSAATLSPTFLSNLTSPSETESGKLGVVTSCSTSR 314
SS P ++ + P G + S STSR
Sbjct: 463 SSRRNQEPITITYIGRPRTPSEGDVASTVSSSTSR 497
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 125 ISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP- 301
I N +TL P + + H LQ + +T+NQ P+E +G P +S +
Sbjct: 332 IMANGSTL----PPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSELNGYPAASQLSSF 387
Query: 302 LHESPA 319
+HE PA
Sbjct: 388 MHEIPA 393
>L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger
protein protein 1,isoform c protein.
Length = 635
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 125 ISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP- 301
I N +TL P + + H LQ + +T+NQ P+E +G P +S +
Sbjct: 100 IMANGSTL----PPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSELNGYPAASQLSSF 155
Query: 302 LHESPA 319
+HE PA
Sbjct: 156 MHEIPA 161
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 125 ISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP- 301
I N +TL P + + H LQ + +T+NQ P+E +G P +S +
Sbjct: 332 IMANGSTL----PPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSELNGYPAASQLSSF 387
Query: 302 LHESPA 319
+HE PA
Sbjct: 388 MHEIPA 393
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 520 LTVSPSLTYNSLMTPWPGAMTGMAVLSVSISR--TTSSAATLSPTFLSNLTSPSETES 353
+T SPS + S T P + + SVS S T SS AT S +S L+S T S
Sbjct: 1977 ITPSPSQSTESTQTSLPSSSPSPSTHSVSSSEGTTMSSGATTSGDKMSFLSSTGTTVS 2034
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 203 VNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPA 319
V+ S + TL + P SS P SSS P +SPA
Sbjct: 566 VSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSPA 604
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +3
Query: 204 STTQTPKILAPLHATKLNQPRALVA----HNQVASIHFTNPL---LVEQDVTTPSFPDSV 362
S PK+ APL T++ Q +VA Q PL ++Q+V T + P
Sbjct: 3417 SQADVPKVAAPLEQTQIQQEVPMVAAPLEPTQADVPKVAAPLEQSQIQQEVPTVAAPSEP 3476
Query: 363 SEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAP 470
++ DV + + AD + ++T I P
Sbjct: 3477 TQADVPKEAAPSEPSQADVPKVAAPLEQTQIQQEVP 3512
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +3
Query: 204 STTQTPKILAPLHATKLNQPRALVA----HNQVASIHFTNPL---LVEQDVTTPSFPDSV 362
S PK+ APL T++ Q +VA Q PL ++Q+V T + P
Sbjct: 3417 SQADVPKVAAPLEQTQIQQEVPMVAAPLEPTQADVPKVAAPLEQSQIQQEVPTVAAPSEP 3476
Query: 363 SEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAP 470
++ DV + + AD + ++T I P
Sbjct: 3477 TQADVPKEAAPSEPSQADVPKVAAPLEQTQIQQEVP 3512
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +3
Query: 204 STTQTPKILAPLHATKLNQPRALVA----HNQVASIHFTNPL---LVEQDVTTPSFPDSV 362
S PK+ APL T++ Q +VA Q PL ++Q+V T + P
Sbjct: 3417 SQADVPKVAAPLEQTQIQQEVPMVAAPLEPTQADVPKVAAPLEQSQIQQEVPTVAAPSEP 3476
Query: 363 SEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAP 470
++ DV + + AD + ++T I P
Sbjct: 3477 TQADVPKEAAPSEPSQADVPKVAAPLEQTQIQQEVP 3512
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 76 NNYHKKAASK*KVSTFNKRKCYDAARSTSRRCTGVRASPSASSQQLKRPK 225
N+ ++K K S +KR+ +S+SRR +R S SQ+ KR K
Sbjct: 42 NSRKSSRSNKSKRSQRSKRRSAQRKKSSSRRKKKLRKEKSRKSQRSKRKK 91
>Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical
protein F08G2.5 protein.
Length = 178
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 233 TLTRNQTEPTESSGRPQSSSIHPLHESPACRAR 331
TLT T+ P+SS + P+ ESPA RAR
Sbjct: 43 TLTSQDRRDTQGCQYPRSSEL-PISESPAPRAR 74
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 436 SISRTTSSAATLSPTFLSNLTSPSETESGKLG 341
++ + SAAT+SP+ ++L SP+ T SG G
Sbjct: 206 TLRNNSVSAATVSPSDDNSLNSPALTSSGSAG 237
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 436 SISRTTSSAATLSPTFLSNLTSPSETESGKLG 341
++ + SAAT+SP+ ++L SP+ T SG G
Sbjct: 177 TLRNNSVSAATVSPSDDNSLNSPALTSSGSAG 208
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 436 SISRTTSSAATLSPTFLSNLTSPSETESGKLG 341
++ + SAAT+SP+ ++L SP+ T SG G
Sbjct: 206 TLRNNSVSAATVSPSDDNSLNSPALTSSGSAG 237
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Frame = +3
Query: 231 APLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGD-----VKLDKKV 395
AP A + QP+ VA+ Q + P TTP+ E D ++ K +
Sbjct: 415 APYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGEQDYSAQWMEYYKSI 474
Query: 396 G--DSVAADEVVLEIETDKTAIPVMAPGHGVIKEL 494
G D A E ++ + + A + PG G+I+++
Sbjct: 475 GAHDKAEAVEAQMKKKKAEAAARAVVPG-GLIQQM 508
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Frame = +3
Query: 231 APLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGD-----VKLDKKV 395
AP A + QP+ VA+ Q + P TTP+ E D ++ K +
Sbjct: 478 APYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGEQDYSAQWMEYYKSI 537
Query: 396 G--DSVAADEVVLEIETDKTAIPVMAPGHGVIKEL 494
G D A E ++ + + A + PG G+I+++
Sbjct: 538 GAHDKAEAVEAQMKKKKAEAAARAVVPG-GLIQQM 571
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Frame = +3
Query: 231 APLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGD-----VKLDKKV 395
AP A + QP+ VA+ Q + P TTP+ E D ++ K +
Sbjct: 456 APYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGEQDYSAQWMEYYKSI 515
Query: 396 G--DSVAADEVVLEIETDKTAIPVMAPGHGVIKEL 494
G D A E ++ + + A + PG G+I+++
Sbjct: 516 GAHDKAEAVEAQMKKKKAEAAARAVVPG-GLIQQM 549
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 203 VNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPA 319
V+ S + TL + P SS P SSS P +SPA
Sbjct: 359 VSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSPA 397
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 203 VNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPA 319
V+ S + TL + P SS P SSS P +SPA
Sbjct: 566 VSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSPA 604
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical protein
C09F9.2 protein.
Length = 1642
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +2
Query: 197 LQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRARCDH 340
++ + NA+ T+ + T RPQ ++H +H C H
Sbjct: 1072 MKYHGKNARGVMTVNFFEEVETSVESRPQPPTVHGMHLEDTCEGSIRH 1119
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 191 HPLQVNNSNAQNT-CTLTRNQTEPTESSGRPQSSSIHPLHESPA 319
HPL V S Q+ L NQTE RP SS P+ +PA
Sbjct: 67 HPLSVPESLVQSPRAILCNNQTEYECVCMRPYSSPHSPVRPTPA 110
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 191 HPLQVNNSNAQNT-CTLTRNQTEPTESSGRPQSSSIHPLHESPA 319
HPL V S Q+ L NQTE RP SS P+ +PA
Sbjct: 67 HPLSVPESLVQSPRAILCNNQTEYECVCMRPYSSPHSPVRPTPA 110
>Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical
protein F32B6.2 protein.
Length = 671
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 462 MAPGHGVIKELYVKDGETVKAGQKL 536
+AP G+I+++ VK GE V GQ L
Sbjct: 606 VAPMPGIIEKILVKPGEQVTTGQAL 630
>Z50742-4|CAA90617.1| 498|Caenorhabditis elegans Hypothetical
protein K09A11.4 protein.
Length = 498
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = -3
Query: 103 LTLPFCGNY*FYGPKNLHLSFESLLANSG-----WSPL 5
L LPF GN + +N+HL F+ L G W+PL
Sbjct: 31 LPLPFFGNLLQFPAENIHLYFDELSQTYGPCFTLWTPL 68
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 191 HPLQVNNSNAQNT-CTLTRNQTEPTESSGRPQSSSIHPLHESPA 319
HPL V S Q+ L NQTE RP SS P+ +PA
Sbjct: 67 HPLSVPESLVQSPRAILCNNQTEYECVCMRPYSSPHSPVRPTPA 110
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 191 HPLQVNNSNAQNT-CTLTRNQTEPTESSGRPQSSSIHPLHESPA 319
HPL V S Q+ L NQTE RP SS P+ +PA
Sbjct: 67 HPLSVPESLVQSPRAILCNNQTEYECVCMRPYSSPHSPVRPTPA 110
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = -3
Query: 565 GASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFL 386
G+SP + + A+T S+ +S TP P T +++ S+S +SS A +
Sbjct: 427 GSSPSTAGTSLASTAVTTETSIGSSS--TPLPSQSTSLSMSSLSTYTPSSSTAGATSPAT 484
Query: 385 SNLTSPSETESGKLGVVT 332
T P+ S G T
Sbjct: 485 QQSTKPTIGTSMSSGPTT 502
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,025,086
Number of Sequences: 27780
Number of extensions: 302036
Number of successful extensions: 1227
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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