Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10c09
(662 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 271 1e-71
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 240 2e-62
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 229 5e-59
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 207 2e-52
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 188 8e-47
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 171 1e-41
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 157 2e-37
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 157 3e-37
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 140 2e-32
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 133 4e-30
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 132 7e-30
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 112 8e-24
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 71 8e-22
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 105 9e-22
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 99 5e-20
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 85 2e-15
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 84 3e-15
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 82 1e-14
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 81 2e-14
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 80 5e-14
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 75 2e-12
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 1e-11
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 66 7e-10
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 66 9e-10
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 65 1e-09
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 64 2e-09
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 62 9e-09
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 60 6e-08
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 58 2e-07
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 55 2e-06
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 53 7e-06
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 52 1e-05
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 48 2e-04
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 0.002
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_O59436 Cluster: Putative uncharacterized protein PH1760... 42 0.018
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4; Endopte... 34 3.5
UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein ... 33 4.6
UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed; ... 33 4.6
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 6.1
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 6.1
UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome s... 33 8.1
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 8.1
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 271 bits (664), Expect = 1e-71
Identities = 134/198 (67%), Positives = 144/198 (72%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120
Query: 396 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 575
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180
Query: 576 XXXLLQTFAREDEAALTA 629
L+ A+EDE A A
Sbjct: 181 KQELIALHAKEDEIAAKA 198
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 240 bits (588), Expect = 2e-62
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 396 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
HSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 229 bits (560), Expect = 5e-59
Identities = 105/150 (70%), Positives = 121/150 (80%)
Frame = +3
Query: 60 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTE 239
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 240 ARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAK 419
ARRKGRH G GKR+GTANARMP+K W +KKIDRH+YHSLY+K K
Sbjct: 61 ARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVK 120
Query: 420 GNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
GNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 GNVFKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 207 bits (506), Expect = 2e-52
Identities = 97/158 (61%), Positives = 116/158 (73%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
+R RKN ARRKGRH G GKR+GTA+ARMPQK LW A KID+HLY
Sbjct: 61 SRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLY 120
Query: 396 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
H LY + KGN FKNKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 121 HLLYQQCKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 188 bits (459), Expect = 8e-47
Identities = 88/158 (55%), Positives = 112/158 (70%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
AR RK EA+ GRH G G+R G+ ARMP KELW KKIDRH+Y
Sbjct: 81 ARWRKMKEAKDMGRHNGVGRREGSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVY 140
Query: 396 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
LYM+AKGNVF+NKR L+E+IH+ K EK + + L++Q
Sbjct: 141 RDLYMRAKGNVFRNKRNLVEHIHKIKNEKKKERQLAEQ 178
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 171 bits (416), Expect = 1e-41
Identities = 87/158 (55%), Positives = 108/158 (68%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
A KNT KGRH GK +GTAN +P++ W +KKID H+
Sbjct: 61 AHCEKNT---LKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMC 117
Query: 396 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
HSLY++ K NVFKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 118 HSLYLRVKRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 157 bits (382), Expect = 2e-37
Identities = 70/158 (44%), Positives = 103/158 (65%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
R+R E + GRH G GKR+G+ N+R K +W + K++RHLY
Sbjct: 61 NRIRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLY 120
Query: 396 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
SLY+K+KGNVFKNK++L E+IH+ K E+ R + D+
Sbjct: 121 RSLYLKSKGNVFKNKKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 157 bits (380), Expect = 3e-37
Identities = 82/178 (46%), Positives = 103/178 (57%), Gaps = 20/178 (11%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV----- 200
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTF 60
Query: 201 ---------------AVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 335
+HSRAR + A+R GRH G+GKRRGT AR+P K LW
Sbjct: 61 PTLRGFHAARAYFNFQIHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHR 120
Query: 336 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
AKKID+H+YHS+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 121 VLRRLLSKYRDAKKIDKHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 140 bits (340), Expect = 2e-32
Identities = 70/158 (44%), Positives = 96/158 (60%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
R+R A+R GRH G GKRRGT ARMP K LW +KIDRHLY
Sbjct: 61 GRIRARHAAKRLGRHSGHGKRRGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLY 120
Query: 396 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
+LY KAKGN+FKNKRVL+E+I + E+ K ++
Sbjct: 121 ETLYAKAKGNMFKNKRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 133 bits (321), Expect = 4e-30
Identities = 60/151 (39%), Positives = 93/151 (61%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
R R E ++KGRH G G R+G ARM +KELW KKIDR Y
Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
Query: 396 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 488
LY++AKG FK+K L ++ K R
Sbjct: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 132 bits (319), Expect = 7e-30
Identities = 63/158 (39%), Positives = 99/158 (62%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
R RK EA++KGRH G GKR GTANARMPQK++W +I + +
Sbjct: 61 GRCRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDF 120
Query: 396 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
Y +AKG++FK++ + + I ++KA++ R K L++Q
Sbjct: 121 RVFYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 112 bits (269), Expect = 8e-24
Identities = 54/146 (36%), Positives = 83/146 (56%)
Frame = +3
Query: 45 LKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 224
+ +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 225 RKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSL 404
+K E R+KGR G G RRG A AR P KE W + KIDR +Y L
Sbjct: 66 KKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKL 125
Query: 405 YMKAKGNVFKNKRVLMEYIHRKKAEK 482
Y AKG F+++ L Y+ + K
Sbjct: 126 YRMAKGGAFRSRSHLFLYMREHELLK 151
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 71.3 bits (167), Expect(2) = 8e-22
Identities = 37/80 (46%), Positives = 50/80 (62%)
Frame = +3
Query: 48 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 227
+L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA--------- 89
Query: 228 KNTEARRKGRHCGFGKRRGT 287
T ARR+G H G KR+GT
Sbjct: 90 --TLARRRGWHMGIRKRKGT 107
Score = 55.2 bits (127), Expect(2) = 8e-22
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +3
Query: 378 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 509
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 105 bits (252), Expect = 9e-22
Identities = 50/139 (35%), Positives = 77/139 (55%)
Frame = +3
Query: 54 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 233
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 234 TEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 413
E ++KGR G G R+G AR K W K ID Y LY K
Sbjct: 66 HEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKK 125
Query: 414 AKGNVFKNKRVLMEYIHRK 470
KGN+FK++ L+ Y+ +K
Sbjct: 126 VKGNLFKSRSHLLLYLKQK 144
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 99 bits (238), Expect = 5e-20
Identities = 49/111 (44%), Positives = 68/111 (61%)
Frame = +3
Query: 177 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXX 356
GL+I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 357 XXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
+KKIDR +YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 563 RYRESKKIDRRMYHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/142 (30%), Positives = 69/142 (48%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
R R E R G G G R+G + R +K+ W + Y
Sbjct: 61 GRARSRAEKRAYGHRKGPGSRKGRSGGRKNEKDEWVSRIRAQRRRLRELRDDGPLTPTQY 120
Query: 396 HSLYMKAKGNVFKNKRVLMEYI 461
+Y KA G F++ L YI
Sbjct: 121 REVYNKASGGEFEDVARLEAYI 142
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 83.8 bits (198), Expect = 3e-15
Identities = 44/135 (32%), Positives = 67/135 (49%)
Frame = +3
Query: 57 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 236
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 237 EARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKA 416
E KGR G G RGT AR P+K W T KID+ Y Y
Sbjct: 67 EQLAKGRRRGEGSVRGTKYARFPRKRRWISRIRALRRELRELKTNNKIDKKTYRRYYRII 126
Query: 417 KGNVFKNKRVLMEYI 461
K F ++ L +I
Sbjct: 127 KSGSFVSRAQLRNHI 141
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Frame = +3
Query: 54 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
+R RK + KGR G G R+G+ANAR P+K W I Y
Sbjct: 66 SRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRTIRAQRKELKGMREDDSISSSEY 125
Query: 396 HSLYMKAKGNVFKN 437
Y KAKG +++
Sbjct: 126 RYYYRKAKGGSYRS 139
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +3
Query: 48 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 221
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 222 VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 401
+ RRKGR G G+R+G A AR+ KE W + IDR Y
Sbjct: 64 SKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRR 123
Query: 402 LYMKAKGNVFKNKRVLMEYI 461
LYM AKG F++ L Y+
Sbjct: 124 LYMLAKGGTFRDLASLKRYM 143
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 79.8 bits (188), Expect = 5e-14
Identities = 44/142 (30%), Positives = 67/142 (47%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 215
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 216 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 395
R R+ G G G R+G A AR +K + + Y
Sbjct: 61 GRARERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQY 120
Query: 396 HSLYMKAKGNVFKNKRVLMEYI 461
+Y A G F + R L Y+
Sbjct: 121 REMYNMANGGEFDSVRRLTNYV 142
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 74.9 bits (176), Expect = 2e-12
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Frame = +3
Query: 36 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHS 212
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V + S
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-S 59
Query: 213 RARVRKNTEARR-KGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 389
R+++ + R K G R+G AR K++W K IDRH
Sbjct: 60 GGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRH 119
Query: 390 LYHSLYMKAKGNVFK 434
Y LY+K KG +K
Sbjct: 120 TYRELYLKTKGGNYK 134
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 72.1 bits (169), Expect = 1e-11
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +3
Query: 60 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 230
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 66.1 bits (154), Expect = 7e-10
Identities = 43/121 (35%), Positives = 68/121 (56%)
Frame = -1
Query: 575 LGGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*V 396
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E +
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGL 110
Query: 395 V*MPVNLLGSSVLQEQFSKNPLSLYP*FLLWHTRIGCTSSLTKATVTTLSTCFCVFADTS 216
+ +P++L +V +Q +++ L+L P L HT + T++LT V + +T+
Sbjct: 111 IKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGTAALTVTAVAAEALSCMARTNTT 170
Query: 215 A 213
A
Sbjct: 171 A 171
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 65.7 bits (153), Expect = 9e-10
Identities = 40/148 (27%), Positives = 72/148 (48%)
Frame = +3
Query: 42 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 221
+L+ +KRLA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 222 VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 401
+ + K R G ++G AR+ +K+++ K I + +
Sbjct: 64 AQHKRRQKAK-RGSKAGSKQGRMGARVGKKQVYVKKVRALRYLLAVFKDRKDITNPEFWA 122
Query: 402 LYMKAKGNVFKNKRVLMEYIHRKKAEKA 485
LY K GN +NK L + KA+++
Sbjct: 123 LYKKVGGNTVRNKAHLHLLVDEIKAKRS 150
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 65.3 bits (152), Expect = 1e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Frame = +3
Query: 57 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 236
KRLAA ++ G ++ + P + ++ ++R +I GL+ +P SR R R
Sbjct: 5 KRLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRH 64
Query: 237 EARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKA 416
++KGR G G R+G R ++E W K++ ++ LY
Sbjct: 65 IKKKKGRRRGHGSRKG---PRTDEEEAWKEKVRAMRRFLNTLKRKGKLEPRVWRQLYRMV 121
Query: 417 KGNVFKNKRVLMEYIHRKKAEK 482
KGN F++ L YI+ K K
Sbjct: 122 KGNYFRDLDHLKTYINEHKLAK 143
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 64.5 bits (150), Expect = 2e-09
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Frame = +3
Query: 57 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 236
+ A ++ K ++ + + ++ +R ++R ++K+GL+ KP +SR R R
Sbjct: 4 RETVARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITH 63
Query: 237 EARRKGRHCGFGKRRGTANAR-MPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 413
E R+ GR G G RRGT AR KE+W ID+ + +LY
Sbjct: 64 EKRKSGRRRGRGSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNLYRM 123
Query: 414 AKGNVFKNKRVLMEYI 461
AKG F++ L Y+
Sbjct: 124 AKGGYFESLAHLRTYM 139
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 62.5 bits (145), Expect = 9e-09
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Frame = +3
Query: 42 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 221
++K K A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 222 VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH--LY 395
+ ++ G G G+R+GT NAR K LW K+ + L
Sbjct: 62 KKLRKAKKQSGLKRGIGRRKGTKNARKKYKILWIHKIRNQRKLLKMFRNKKQFLNYKILL 121
Query: 396 HSLYM--KAKGNVFKNKRVLMEYI 461
+ ++ K KGN F + + L+E++
Sbjct: 122 NKVFFFSKIKGNFFSSTKHLLEHM 145
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 59.7 bits (138), Expect = 6e-08
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +3
Query: 42 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 221
+LK +KRLA+ V G ++ D + + ++A+ +R+NIR +I + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 222 VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 401
+ +A+R R G ++G AR+ +KE++ K++ + +
Sbjct: 64 A-QTKKAQRNKRGTKQGSKQGRKGARVGKKEIYVAKVRSLRRLLKIAKDRKELTNPEFWA 122
Query: 402 LYMKAKGNVFKNK---RVLMEYIHRKK 473
LY K GN +NK R LME I K+
Sbjct: 123 LYKKVGGNTVRNKAHLRQLMEEIVAKR 149
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 58.0 bits (134), Expect = 2e-07
Identities = 39/121 (32%), Positives = 62/121 (51%)
Frame = -1
Query: 485 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFSKNPLSLYP*FLL 306
G+ LL + +L E + L + V+ V+ V LL V E+ +NP +P LL
Sbjct: 43 GMDHLLVITLLAPGNAFYEKLFLHMQVQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLL 102
Query: 305 WHTRIGCTSSLTKATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDL 126
+ +G T L A + L + VF+ S G+ ++ LDD+ I D ++D+L GVG+ D
Sbjct: 103 GYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDF 162
Query: 125 I 123
I
Sbjct: 163 I 163
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 54.8 bits (126), Expect = 2e-06
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 198 VAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 377
V++H +R R ARRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 378 IDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 482
ID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +3
Query: 366 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +1
Query: 406 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRN 585
T +RR MCS+T SW+TST PA ++ R+HASAA++ PR+R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRK 60
Query: 586 CCRPSLEKTKPR 621
R S + +PR
Sbjct: 61 SSRLSPRRKRPR 72
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 48.4 bits (110), Expect = 2e-04
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = -2
Query: 520 RASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAF-M*SEWYRCLSIFLAVLYFRSNF 344
+A AWS S F+ L L +PF + Y +++ L RS
Sbjct: 53 QAPAWSASSFLAGLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH 112
Query: 343 LRTLCLCTHSSFCGIRALAVPLLLPKPQ*RPFLRASVFLRTRARECT 203
R L L +F GI+ALAVP L P PF R+ VF R RARE T
Sbjct: 113 -RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 63 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 194
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -1
Query: 197 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 81
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_O59436 Cluster: Putative uncharacterized protein PH1760;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH1760 - Pyrococcus horikoshii
Length = 177
Score = 41.5 bits (93), Expect = 0.018
Identities = 32/137 (23%), Positives = 57/137 (41%)
Frame = -1
Query: 437 VLEHITLRLHVE*VV*MPVNLLGSSVLQEQFSKNPLSLYP*FLLWHTRIGCTSSLTKATV 258
VL+ +L +VE + +P++ L L + SK P L P LL H+ T ++ +V
Sbjct: 3 VLKLTSLSPYVEHSIRLPIDFLLLLELPKFSSKGPYRLNPKLLLTHSCRLLTFPTSRTSV 62
Query: 257 TTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTSH 78
+ F + + + Y F + L+ ++ + I+ + I PH + T
Sbjct: 63 SPFLLLFMPYPSPISALPLYGFFPYDPFLNKPPNIFPRYRGSNFINLLRIDPHPILATLQ 122
Query: 77 NRGCKPLLQLEGTHPDT 27
P L +G H T
Sbjct: 123 ELSSYPPLHFQGIHTPT 139
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 1.5
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +3
Query: 54 QKRLAASVMRCGKKKVWLDPNEINEIAN 137
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4;
Endopterygota|Rep: 60S ribosomal protein L14 - Aedes
aegypti (Yellowfever mosquito)
Length = 229
Score = 33.9 bits (74), Expect = 3.5
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +3
Query: 33 RMSSLKLQKRLAASVMRCG-----KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 197
+ S+ + Q+R AA RC + K+ L +E N I + ++ ++++ +G++ KP
Sbjct: 136 KFSTTRWQERAAAKAKRCNLTDFDRFKLRLARSERNRIVSAQFKKLKKEVVNNGMLFGKP 195
Query: 198 VAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKE 314
V R+N +++G+ K+R N + P K+
Sbjct: 196 VKGTKPLPKRRNPIPKKEGK-----KKRVRKNKKAPAKK 229
>UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Shewanella loihica PV-4|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 718
Score = 33.5 bits (73), Expect = 4.6
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -1
Query: 581 LLLGGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHI 423
L LG +T+L A A L+ ++ GL+ A +RPGL+ LL ++ ++ H + E I
Sbjct: 553 LNLGNDTYLEATARLMDTLSRGLAGEAYLIRPGLI-LLTLNEVNAHQALQERI 604
>UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed;
n=6; Oryza sativa|Rep: Spc97/Spc98 family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1139
Score = 33.5 bits (73), Expect = 4.6
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 51 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 221
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 222 VRKNTEARRKGRHCGFG 272
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 6.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 205 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 86
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 6.1
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 408 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 509
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF15006, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 340
Score = 32.7 bits (71), Expect = 8.1
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -1
Query: 269 KATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLIDFI 114
KA VT+L C F+D V+C F TI+DH + G +C L+ FI
Sbjct: 62 KANVTSLFICNLSFSDILVCVFCLPFTVIYTIMDHW---VFGSLLCRLVPFI 110
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 527 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 408
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,257,773
Number of Sequences: 1657284
Number of extensions: 12647043
Number of successful extensions: 37041
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 35743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36995
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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