Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10c07
(657 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 23 1.7
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 23 1.7
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 23 2.9
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 5.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 8.9
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 8.9
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 8.9
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 23.4 bits (48), Expect = 1.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 106 LLSIIVDTFIHEILITISVQEILIYTY 26
LL I+ +T EILIT++V E+ I Y
Sbjct: 283 LLCILTNTL--EILITVTVCELTILEY 307
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 23.4 bits (48), Expect = 1.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 106 LLSIIVDTFIHEILITISVQEILIYTY 26
LL I+ +T EILIT++V E+ I Y
Sbjct: 108 LLCILTNTL--EILITVTVCELTILEY 132
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 22.6 bits (46), Expect = 2.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 479 MGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLW 601
+ +HI +I + + VL L L ++P RVF +LW
Sbjct: 273 LNKHIDNISLRARKQVVLMLGTVVLSFFLCLIPFRVF-ILW 312
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +2
Query: 293 FYGIITALFYYENISNWVLFFN 358
F+ +T++ + + S W LF N
Sbjct: 100 FHSFMTSVLFSQVASRWPLFLN 121
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +3
Query: 282 RQPLFMEL*LPYFTMKTYQIGYSFLMFW 365
++P F + +FT + +G + L+F+
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFY 187
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +3
Query: 282 RQPLFMEL*LPYFTMKTYQIGYSFLMFW 365
++P F + +FT + +G + L+F+
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFY 187
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +3
Query: 282 RQPLFMEL*LPYFTMKTYQIGYSFLMFW 365
++P F + +FT + +G + L+F+
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFY 187
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +3
Query: 282 RQPLFMEL*LPYFTMKTYQIGYSFLMFW 365
++P F + +FT + +G + L+F+
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFY 187
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 645 FSGASWKNQGPSILVHNSQNTLIGKI 568
F GA+ + + VH+ Q +L+GK+
Sbjct: 120 FPGATSQPPTDNSHVHHHQTSLLGKV 145
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = +2
Query: 398 MMYISKPRYLNNTQLLDPG 454
++ ++ P+Y N ++DPG
Sbjct: 143 VLNLTMPKYEPNPSIIDPG 161
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = +2
Query: 398 MMYISKPRYLNNTQLLDPG 454
++ ++ P+Y N ++DPG
Sbjct: 143 VLNLTMPKYEPNPSIIDPG 161
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,935
Number of Sequences: 336
Number of extensions: 3724
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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