Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c07
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003080-1|AAH03080.1|  173|Homo sapiens HSPC171 protein protein.     123   6e-28
BC013412-1|AAH13412.1|  173|Homo sapiens HSPC171 protein protein.     122   1e-27
BC021109-1|AAH21109.1|  100|Homo sapiens HSPC171 protein protein.      63   7e-10

>BC003080-1|AAH03080.1|  173|Homo sapiens HSPC171 protein protein.
          Length = 173

 Score =  123 bits (296), Expect = 6e-28
 Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
 Frame = +2

Query: 227 QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 406
           QI  EN  T+KFY  + + A + Y ++T +F+Y + S W        L ++ A Y  M  
Sbjct: 14  QIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSS 73

Query: 407 ISKPRYLNNTQLLDPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRV 586
           +++  +  +  L+D G+DLNME GM EH+KD+++L++I QVL+  + Y W   L+ P R 
Sbjct: 74  MARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFWLLAPGRA 133

Query: 587 FWLLWTNILGPWFFQE----APENTEK 655
            +LLW N+LGPWF  +    APE+ EK
Sbjct: 134 LYLLWVNVLGPWFTADSGTPAPEHNEK 160


>BC013412-1|AAH13412.1|  173|Homo sapiens HSPC171 protein protein.
          Length = 173

 Score =  122 bits (293), Expect = 1e-27
 Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
 Frame = +2

Query: 227 QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 406
           QI  EN  T+KFY  + + A + Y ++T +F+Y + S W        L ++ A Y  M  
Sbjct: 14  QIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSS 73

Query: 407 ISKPRYLNNTQLLDPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRV 586
           +++  +     L+D G+DLNME GM EH+KD+++L++I QVL+  + Y W   L+ P R 
Sbjct: 74  MARAAFSEYGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFWLLAPGRA 133

Query: 587 FWLLWTNILGPWFFQE----APENTEK 655
            +LLW N+LGPWF  +    APE+ EK
Sbjct: 134 LYLLWVNVLGPWFTADSGTPAPEHNEK 160


>BC021109-1|AAH21109.1|  100|Homo sapiens HSPC171 protein protein.
          Length = 100

 Score = 63.3 bits (147), Expect = 7e-10
 Identities = 30/87 (34%), Positives = 48/87 (55%)
 Frame = +2

Query: 227 QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 406
           QI  EN  T+KFY  + + A + Y ++T +F+Y + S W        L ++ A Y  M  
Sbjct: 14  QIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSS 73

Query: 407 ISKPRYLNNTQLLDPGLDLNMEGGMGE 487
           +++  +  +  L+D G+DLNME GM E
Sbjct: 74  MARAAFSEDGALMDGGMDLNMEQGMAE 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,248,894
Number of Sequences: 237096
Number of extensions: 2170038
Number of successful extensions: 10596
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10596
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)