Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c06
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   5.5  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    24   5.5  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   9.7  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   9.7  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   9.7  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 262 LFVRFDFLFHLNLFIAAFLIEYFSF 188
           LF+ F F+F L+  + +F   +FSF
Sbjct: 51  LFINFIFMFLLHFVLFSFSFPFFSF 75


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 625 LFTYNRSQEEPKFTNVYKLRCHN*GY 702
           +FTY    ++    N+YK+ C N G+
Sbjct: 405 IFTYLIGTDKSGGKNLYKMACENKGF 430


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 503 KVTFVGENFTRKPPKFERFI 562
           ++TF+   FTR+  KFE+ +
Sbjct: 280 RMTFLSSKFTRRVDKFEKCV 299


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 672 YICELGFFLTPIIGKQKVAFSSGCVTWA 589
           Y+C   F L  +   Q VA S G   WA
Sbjct: 8   YMCVALFVLVTVALGQVVAQSEGAAVWA 35


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 316 INRQGTFGDLLCVMFD 269
           I+R GTF D+LC+  D
Sbjct: 10  IDRGGTFTDVLCITPD 25


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 316 INRQGTFGDLLCVMFD 269
           I+R GTF D+LC+  D
Sbjct: 10  IDRGGTFTDVLCITPD 25


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,028
Number of Sequences: 2352
Number of extensions: 11839
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)