Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c05
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.2  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   1.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.0  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   8.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.8  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = +1

Query: 256 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKY 360
           +C KC Y  ++ + L            Y+C  C Y
Sbjct: 260 QCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 294


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = +1

Query: 256 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKY 360
           +C KC Y  ++ + L            Y+C  C Y
Sbjct: 18  QCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 52


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 110 NATLVKHIMRLIIIVT*NFNT 172
           N+ + KH++ L+++V   FNT
Sbjct: 50  NSVVQKHLILLMVLVNLIFNT 70


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 377 PKGRFILVLRLSKENSAIESLY 442
           P+G+F+++   +K+NS   +L+
Sbjct: 216 PRGQFMMIALPNKDNSWTVTLF 237


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 377 PKGRFILVLRLSKENSAIESLY 442
           P+G+F+++   +K+NS   +L+
Sbjct: 216 PRGQFMMIALPNKDNSWTVTLF 237


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 377 PKGRFILVLRLSKENSAIESLY 442
           P+G+F+++   +K+NS   +L+
Sbjct: 216 PRGQFMMIALPNKDNSWTVTLF 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,252
Number of Sequences: 336
Number of extensions: 3428
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)