Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10c05
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3039|AAF55918.1| 120|Drosophila melanogaster CG13418-P... 143 2e-34
X53670-1|CAA37710.1| 313|Drosophila melanogaster protein ( Dros... 38 0.009
L26091-1|AAA92864.2| 313|Drosophila melanogaster transcription ... 38 0.009
AY051843-1|AAK93267.1| 313|Drosophila melanogaster LD34766p pro... 38 0.009
AE014134-2559|AAF53436.1| 313|Drosophila melanogaster CG3710-PA... 38 0.009
AE013599-3053|AAM68394.2| 108|Drosophila melanogaster CG33785-P... 37 0.021
S88139-1|AAB21674.1| 129|Drosophila melanogaster RNA polymerase... 37 0.027
AE014297-1835|AAF55045.1| 129|Drosophila melanogaster CG3284-PA... 37 0.027
S66940-1|AAB29028.2| 129|Drosophila melanogaster RNA polymerase... 35 0.11
AE014296-3291|AAF49057.1| 352|Drosophila melanogaster CG6996-PA... 30 2.4
BT023902-1|ABA81836.1| 390|Drosophila melanogaster IP14766p pro... 30 3.1
AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA... 30 3.1
AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p pro... 29 4.1
AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-P... 29 4.1
Y16240-1|CAA76129.1| 562|Drosophila melanogaster gonad-specific... 29 5.5
AY069372-1|AAL39517.1| 85|Drosophila melanogaster LD07912p pro... 29 5.5
AF043264-1|AAC38824.1| 562|Drosophila melanogaster amiloride-se... 29 5.5
AE014297-128|AAF52108.2| 562|Drosophila melanogaster CG1058-PA ... 29 5.5
>AE014297-3039|AAF55918.1| 120|Drosophila melanogaster CG13418-PA
protein.
Length = 120
Score = 143 bits (346), Expect = 2e-34
Identities = 68/116 (58%), Positives = 82/116 (70%), Gaps = 3/116 (2%)
Frame = +1
Query: 40 STSTAFCARCGSILPLLQEFGFVKCYTCKAHYEADNYSNLKFQYTIHFNTI--SVITNEN 213
S FC CGSILP LQ G V CY CK ++ D YS K ++TIHFNT S + N
Sbjct: 5 SNCPGFCPSCGSILPELQVKGNVICYNCKKEFQPDVYSGEKSEFTIHFNTYDPSKVFNRT 64
Query: 214 ILHTDGP-EGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKETENS 378
++ +GPVVERKC KC +D+MSYATLQLRSADEGQTVF+TC+KCK+KE+ENS
Sbjct: 65 KRESESDADGPVVERKCPKCNHDKMSYATLQLRSADEGQTVFFTCLKCKFKESENS 120
>X53670-1|CAA37710.1| 313|Drosophila melanogaster protein (
Drosophila gene forRNA polymerase II elongation factor
DmS-II. ).
Length = 313
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 256 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 354
KCAKC +Y LQ RSADE T F C +C
Sbjct: 274 KCAKCKKRNCTYNQLQTRSADEPMTTFVMCNEC 306
>L26091-1|AAA92864.2| 313|Drosophila melanogaster transcription
elongation factor protein.
Length = 313
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 256 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 354
KCAKC +Y LQ RSADE T F C +C
Sbjct: 274 KCAKCKKRNCTYNQLQTRSADEPMTTFVMCNEC 306
>AY051843-1|AAK93267.1| 313|Drosophila melanogaster LD34766p
protein.
Length = 313
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 256 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 354
KCAKC +Y LQ RSADE T F C +C
Sbjct: 274 KCAKCKKRNCTYNQLQTRSADEPMTTFVMCNEC 306
>AE014134-2559|AAF53436.1| 313|Drosophila melanogaster CG3710-PA
protein.
Length = 313
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 256 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 354
KCAKC +Y LQ RSADE T F C +C
Sbjct: 274 KCAKCKKRNCTYNQLQTRSADEPMTTFVMCNEC 306
>AE013599-3053|AAM68394.2| 108|Drosophila melanogaster CG33785-PA,
isoform A protein.
Length = 108
Score = 37.1 bits (82), Expect = 0.021
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 250 ERKCAKCGYDRMSYATLQLRSADEGQTVFYTC 345
+ +C CG+ R + +Q RSADE T FY C
Sbjct: 66 DAECPTCGHKRAYFMQIQTRSADEPMTTFYKC 97
>S88139-1|AAB21674.1| 129|Drosophila melanogaster RNA polymerase II
15-kda subunit protein.
Length = 129
Score = 36.7 bits (81), Expect = 0.027
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Frame = +1
Query: 25 TESPLSTSTAFCARCGSIL-PLLQEFGFVKCYTCK-AHYEADNYSNLKFQYTIHFNTISV 198
TE P FC C ++L P + + Y C+ Y+ SN + I + I
Sbjct: 10 TEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQKTNSNCIYVNKI-MHEIDE 68
Query: 199 ITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYKET 369
+T+ P P E C KC + + Q R A+E ++Y C C ++ T
Sbjct: 69 LTHIVPDVISDPTLPRTEDHACPKCSHREAVFFKAQTRRAEEEMRLYYVCTNQNCTHRWT 128
Query: 370 E 372
E
Sbjct: 129 E 129
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 220 HTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKETENS 378
HT+GP G V R C +C + M Y + E + + Y C C YK+ NS
Sbjct: 9 HTEGP-GFVGIRFCQEC--NNMLYP----KEDKENKILLYACRNCDYKQKTNS 54
>AE014297-1835|AAF55045.1| 129|Drosophila melanogaster CG3284-PA
protein.
Length = 129
Score = 36.7 bits (81), Expect = 0.027
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Frame = +1
Query: 25 TESPLSTSTAFCARCGSIL-PLLQEFGFVKCYTCK-AHYEADNYSNLKFQYTIHFNTISV 198
TE P FC C ++L P + + Y C+ Y+ + SN + I + I
Sbjct: 10 TEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKI-MHEIDE 68
Query: 199 ITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYKET 369
+T+ P P E C KC + + Q R A+E ++Y C C ++ T
Sbjct: 69 LTHIVPDVISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWT 128
Query: 370 E 372
E
Sbjct: 129 E 129
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 220 HTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKETENS 378
HT+GP G V R C +C + M Y + E + + Y C C YK+ +S
Sbjct: 9 HTEGP-GFVGIRFCQEC--NNMLYP----KEDKENKILLYACRNCDYKQEADS 54
>S66940-1|AAB29028.2| 129|Drosophila melanogaster RNA polymerase II
subunit 9 protein.
Length = 129
Score = 34.7 bits (76), Expect = 0.11
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Frame = +1
Query: 25 TESPLSTSTAFCARCGSIL-PLLQEFGFVKCYTCK-AHYEADNYSNLKFQYTIHFNTISV 198
TE P FC C ++L P + + Y C+ Y+ + SN + I + I
Sbjct: 10 TEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKI-MHEIDE 68
Query: 199 ITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYKET 369
+T+ P P E C KC + Q R A+E ++Y C C ++ T
Sbjct: 69 LTHIVPDVISDPTLPRTEDHACPKCSHREAVSFQAQTRRAEEEMRLYYVCTNQNCTHRWT 128
Query: 370 E 372
E
Sbjct: 129 E 129
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 220 HTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKETENS 378
HT+GP G V R C +C + M Y + E + + Y C C YK+ +S
Sbjct: 9 HTEGP-GFVGIRFCQEC--NNMLYP----KEDKENKILLYACRNCDYKQEADS 54
>AE014296-3291|AAF49057.1| 352|Drosophila melanogaster CG6996-PA
protein.
Length = 352
Score = 30.3 bits (65), Expect = 2.4
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 118 TCKAHYEADNYSNLKFQYTIHFNTISVITNENILHTDGPEGPVVERKCAKCGYDR---MS 288
TC +Y + N +F ++ S L TDG G V R KCGYDR +
Sbjct: 212 TCNGYYYCKDLGNGEF--SLEHGVCS--DGRFFLATDG--GACVPRSKVKCGYDRCVGLG 265
Query: 289 YATLQL-RSADEGQTVFYTC 345
+T+QL +D+G + C
Sbjct: 266 NSTIQLANESDDGCRGYSIC 285
>BT023902-1|ABA81836.1| 390|Drosophila melanogaster IP14766p
protein.
Length = 390
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 256 KCAKCGYDRMSYATLQLRS---ADEGQTVFYTCIKCKY 360
KC+ C + + Y T QLR+ A+ G+T F+ C KC Y
Sbjct: 208 KCSACEFTTL-YRT-QLRAHELAEHGKTKFFRCDKCSY 243
>AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA
protein.
Length = 2171
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 256 KCAKCGYDRMSYATLQLRS---ADEGQTVFYTCIKCKY 360
KC+ C + + Y T QLR+ A+ G+T F+ C KC Y
Sbjct: 309 KCSACEFTTL-YRT-QLRAHELAEHGKTKFFRCDKCSY 344
>AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p
protein.
Length = 664
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +1
Query: 178 HFNT-ISVITNENILHTDGPEGPVVERKCAKCG---YDRMSYATLQLRSADEGQTVFYTC 345
HF + + + ++ LH P+GPV E +C CG D S R D Y C
Sbjct: 453 HFRSKANFLIHKKALH---PDGPVAEVQCTLCGRWLRDERSLRKHLARHDDRDGDTKYRC 509
Query: 346 IKCKYKETENS 378
+ C +++ +
Sbjct: 510 LLCNAEKSSRA 520
>AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-PA
protein.
Length = 664
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +1
Query: 178 HFNT-ISVITNENILHTDGPEGPVVERKCAKCG---YDRMSYATLQLRSADEGQTVFYTC 345
HF + + + ++ LH P+GPV E +C CG D S R D Y C
Sbjct: 453 HFRSKANFLIHKKALH---PDGPVAEVQCTLCGRWLRDERSLRKHLARHDDRDGDTKYRC 509
Query: 346 IKCKYKETENS 378
+ C +++ +
Sbjct: 510 LLCNAEKSSRA 520
>Y16240-1|CAA76129.1| 562|Drosophila melanogaster gonad-specific
amiloride-sensitivesodium channel 1 protein.
Length = 562
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 10 KLIMSTESPLSTSTAFCARCGSILPLLQEFGFVKCYTCKAHYEADNYSNLK 162
+ I S S L T F A CG I L F + H+ ++NLK
Sbjct: 507 QFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLK 557
>AY069372-1|AAL39517.1| 85|Drosophila melanogaster LD07912p
protein.
Length = 85
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 10 KLIMSTESPLSTSTAFCARCGSILPLLQEFGFVKCYTCKAHYEADNYSNLK 162
+ I S S L T F A CG I L F + H+ ++NLK
Sbjct: 30 QFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLK 80
>AF043264-1|AAC38824.1| 562|Drosophila melanogaster
amiloride-sensitive Na+ channel protein.
Length = 562
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 10 KLIMSTESPLSTSTAFCARCGSILPLLQEFGFVKCYTCKAHYEADNYSNLK 162
+ I S S L T F A CG I L F + H+ ++NLK
Sbjct: 507 QFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLK 557
>AE014297-128|AAF52108.2| 562|Drosophila melanogaster CG1058-PA
protein.
Length = 562
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 10 KLIMSTESPLSTSTAFCARCGSILPLLQEFGFVKCYTCKAHYEADNYSNLK 162
+ I S S L T F A CG I L F + H+ ++NLK
Sbjct: 507 QFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLK 557
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,148,464
Number of Sequences: 53049
Number of extensions: 545152
Number of successful extensions: 1212
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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