Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10c03
(515 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 206 2e-52
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 200 2e-50
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 184 8e-46
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 153 2e-36
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 143 2e-33
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 136 3e-31
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 134 1e-30
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 132 3e-30
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 120 3e-26
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 115 6e-25
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 103 2e-21
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 87 2e-16
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 87 3e-16
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 84 2e-15
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 83 3e-15
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 80 3e-14
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 77 2e-13
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 65 1e-09
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 64 1e-09
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 63 4e-09
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 63 4e-09
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 62 6e-09
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 60 4e-08
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 58 9e-08
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 58 1e-07
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 58 2e-07
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 57 2e-07
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 57 3e-07
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 56 6e-07
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 54 3e-06
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 52 1e-05
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 52 1e-05
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 51 1e-05
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 49 6e-05
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 48 2e-04
UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2; Wolbach... 46 4e-04
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 46 4e-04
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 41 0.015
UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5; Bacteri... 40 0.034
UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10; ... 38 0.14
UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7; Mollicu... 38 0.18
UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycopla... 37 0.31
UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2; Halobacter... 35 0.96
UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: Fli... 34 1.7
UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2; Mycopla... 33 2.9
UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2; ... 33 3.9
UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1; Fusoba... 32 6.8
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa... 32 8.9
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 206 bits (504), Expect = 2e-52
Identities = 99/115 (86%), Positives = 105/115 (91%), Gaps = 1/115 (0%)
Frame = +3
Query: 132 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 309 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 473
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 200 bits (487), Expect = 2e-50
Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
Frame = +3
Query: 132 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 309 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 476
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 184 bits (449), Expect = 8e-46
Identities = 87/110 (79%), Positives = 101/110 (91%)
Frame = +3
Query: 141 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 320
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 321 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 470
TP GEGSKTW+ ++MRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIA
Sbjct: 68 TPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEVEVTIA 117
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 153 bits (371), Expect = 2e-36
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +3
Query: 234 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIV 413
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL+SPSEIV
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIV 462
Query: 414 KQITSINIEPGVEVEVTIAD 473
KQITSI++EPGVEVEVTIA+
Sbjct: 463 KQITSISLEPGVEVEVTIAN 482
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 143 bits (346), Expect = 2e-33
Identities = 69/119 (57%), Positives = 88/119 (73%)
Frame = +3
Query: 114 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 293
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 294 KILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 470
K+LR+TTRKTPCGEGSKTWDRFQ+RIHKRVIDL S E Q+ I +EPGV +V ++
Sbjct: 60 KVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEPGVNCDVIVS 118
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 136 bits (329), Expect = 3e-31
Identities = 63/114 (55%), Positives = 85/114 (74%)
Frame = +3
Query: 132 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRIT 311
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 312 TRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 473
TRKTPCGEGSKTWD +QMRI+KRV+ + + E VK+ITS+ +EPGVE+EV + D
Sbjct: 65 TRKTPCGEGSKTWDHYQMRIYKRVLSMKTTPETVKEITSLKVEPGVELEVAMFD 118
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 134 bits (323), Expect = 1e-30
Identities = 63/113 (55%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = +3
Query: 132 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTKILRI 308
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 309 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 467
T RK+PCGEGSKTWDRF+MRI+KR+IDL VK IT+ I+PGVE+E+T+
Sbjct: 64 TVRKSPCGEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGVEIELTM 116
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 132 bits (320), Expect = 3e-30
Identities = 56/111 (50%), Positives = 85/111 (76%)
Frame = +3
Query: 141 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 320
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 321 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 473
TPCG G+ TWD F+++I+KR+IDLH+P+E VK+ITS +E GV+V +TI D
Sbjct: 65 TPCGNGTNTWDTFELKIYKRIIDLHAPTEQVKKITSFTMESGVDVSITILD 115
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 120 bits (288), Expect = 3e-26
Identities = 56/120 (46%), Positives = 82/120 (68%)
Frame = +3
Query: 108 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 287
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 288 PTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 467
P + LRITTR+ PCG G++T+D F++RI+KRVID +E VKQ+T I +EP V VEV++
Sbjct: 61 PRRRLRITTRRAPCGNGTETYDHFELRIYKRVIDFQGTAEAVKQVTQIALEPDVHVEVSV 120
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 115 bits (277), Expect = 6e-25
Identities = 46/97 (47%), Positives = 70/97 (72%)
Frame = +3
Query: 177 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 356
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK + + RK+PCGEG+ TWD+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 357 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 467
F+M+IHKR+ID HS IT IN++ G+E++ I
Sbjct: 76 FEMKIHKRIIDFHSNKSEFNSITPINLDNGIEIDAQI 112
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 103 bits (248), Expect = 2e-21
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Frame = +3
Query: 141 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAK----KQKLRV--KGPVRMPTKIL 302
EK + +IR+ +TSR+ + LE +I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 303 RITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 467
++T RK+PCGEGSKTWDRF+MRIHKRVID K IT+ I PG+ VE+ +
Sbjct: 66 KMTVRKSPCGEGSKTWDRFEMRIHKRVIDFQCTLPTFKDITNFKIGPGINVELNV 120
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 87.4 bits (207), Expect = 2e-16
Identities = 36/98 (36%), Positives = 62/98 (63%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+ RI L+ N R L+++C+ + A K + + GPV +PT+ + + RK P GEGS+TWD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 354 RFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 467
++MR+HKR+ID+ + ++QI I + V +E+ +
Sbjct: 67 HWEMRVHKRLIDISADERALRQIMRIQVPRDVNIEIVL 104
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 86.6 bits (205), Expect = 3e-16
Identities = 34/94 (36%), Positives = 65/94 (69%)
Frame = +3
Query: 180 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 359
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PCG G++T++++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 360 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEV 461
+MR+H+R+ID+ + + ++++ + I V +E+
Sbjct: 66 EMRMHRRIIDISADDKTIRRLIDLKIPDDVHLEL 99
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 83.8 bits (198), Expect = 2e-15
Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +3
Query: 132 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK+ ++
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV-QL 62
Query: 309 TTRKTPCGEGSKTWD-RFQMRI 371
+ + C + W+ +FQ RI
Sbjct: 63 ESYISQC--AAVCWESKFQHRI 82
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 83.4 bits (197), Expect = 3e-15
Identities = 37/102 (36%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = +3
Query: 165 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 341
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGY 77
Query: 342 KTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 467
T+D ++MRIHKRV+D+ + ++Q+ + I V+VE+ +
Sbjct: 78 HTYDHWEMRIHKRVVDMDADERALRQLMRLRIPEDVKVEIEL 119
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 80.2 bits (189), Expect = 3e-14
Identities = 37/101 (36%), Positives = 64/101 (63%)
Frame = +3
Query: 165 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 344
P + RI + S +V+S+E+V + A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 345 TWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 467
+D ++MRIHKR+ID+ ++++ I I + V +E+ I
Sbjct: 63 VFDHWEMRIHKRLIDVELNDKVMRNIMRIRVPSNVYIEIQI 103
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 77.0 bits (181), Expect = 2e-13
Identities = 31/98 (31%), Positives = 59/98 (60%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+ RI L S N+ SL V + N A+K ++V GP+ +PT + + + P GEG K W+
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Query: 354 RFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 467
++M++HKR+ID+ + +++Q+ + + V +E+ +
Sbjct: 64 HWEMKVHKRIIDIAADERVMRQLMRVRVPDDVYIEIEL 101
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 64.9 bits (151), Expect = 1e-09
Identities = 27/80 (33%), Positives = 49/80 (61%)
Frame = +3
Query: 177 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 356
+RI + S ++ L +V + K+ ++++GP+ +PTKILR+ + G+K WD
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 357 FQMRIHKRVIDLHSPSEIVK 416
+QMRIH+R+ID+ + +K
Sbjct: 64 YQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +3
Query: 183 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 362
I + ++++ +E+ ++ + + GP R P + L ITTRK+PCGEG+ TW RF+
Sbjct: 27 IIVVGKDLKLVERYVKSIVKEGRA--FGISGPCRAPVRRLTITTRKSPCGEGTNTWHRFE 84
Query: 363 MRIHKRVIDLHSPSEIVKQITSINIE-PGVEVEVTIAD 473
+R++KR + + I S + PG++V V + +
Sbjct: 85 LRMYKRTFWVTCGGNDISTILSKTVVIPGIQVTVEVEE 122
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 62.9 bits (146), Expect = 4e-09
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +3
Query: 360 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 476
+M+IH ++IDL SPSEIVKQITS++IEP VE EVTIADA
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEVEAEVTIADA 71
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 62.9 bits (146), Expect = 4e-09
Identities = 32/99 (32%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +3
Query: 168 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKT 347
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTKI R T K+P +
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP-HINKDS 59
Query: 348 WDRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEV 461
++F++RIH R++D+ + + + V +T +++ P V VEV
Sbjct: 60 REQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEV 98
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 62.5 bits (145), Expect = 6e-09
Identities = 29/100 (29%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+IRI L + + + L++ +++ A++ +V GP+ +PT+I R T ++P + K+ +
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSRE 63
Query: 354 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTIA 470
+F++R HKR++D+ P+ + V Q+ +++ GV+VE+ ++
Sbjct: 64 QFEVRTHKRMLDILEPTQQTVDQLMKLDLSAGVDVEIKLS 103
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 59.7 bits (138), Expect = 4e-08
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +3
Query: 150 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 329
QA +IRI L S ++ C ++ AK + RV GPV +PTK ++P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTKRRIFCVLRSP- 89
Query: 330 GEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEVTI 467
+ + F+ R H R+ID+H P ++ + + ++ + GV+VE+ +
Sbjct: 90 HVNKDSREHFETRTHHRLIDVHQPTAQTIDALMALELPSGVDVEIKL 136
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 58.4 bits (135), Expect = 9e-08
Identities = 30/99 (30%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
RIRI L + + R +++ D++ AK+ +V GP+ +PTK R T +P D
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARD 63
Query: 354 RFQMRIHKRVIDLHSPSE-IVKQITSINIEPGVEVEVTI 467
++++R HKR+ID+ P++ V + +++ GV+V++++
Sbjct: 64 QYEIRTHKRLIDIVDPTDKTVDALMKLDLAAGVDVQISL 102
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/100 (27%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +3
Query: 171 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 350
++I+I L S + RSL++ ++++ K+ + GP+ +P KI R T ++P K+
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP-HVHKKSR 61
Query: 351 DRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 467
++F++R HKR++ + P+ +V ++ +++ GV+V + +
Sbjct: 62 EQFEIRKHKRLLVIDDPNPAVVDALSKVDLAAGVDVVIEL 101
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+IRI L S + L + +++ AK+ V GP+ +PT++ R T K+P + K+ +
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKSRE 61
Query: 354 RFQMRIHKRVIDLHS-PSEIVKQITSINIEPGVEVEVTIAD 473
+FQ+ +HK +++L S + ++ T+ + GV++ V + D
Sbjct: 62 QFQLAVHKCLLELSSFNAHLLSTFTNFQLPAGVDISVEVRD 102
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 57.2 bits (132), Expect = 2e-07
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +3
Query: 111 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 290
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 291 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVID-LHSPSEIVKQITSINIEPGVEVEVTI 467
TK K+P + F++R H+R+ID L+ ++ + + +++ GV+VEV +
Sbjct: 133 TKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/97 (26%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+IRI L + R L++ D++ AK+ + GP+ +PT + T ++P K+ +
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSRE 72
Query: 354 RFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEV 461
+F++R H+R+ID+ +P S+ + + ++ + GV++++
Sbjct: 73 QFEIRTHRRLIDILNPTSKTIDALKTLTLPAGVDIKI 109
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 55.6 bits (128), Expect = 6e-07
Identities = 29/99 (29%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
RIRI L S + R +++ +++ AK+ +V GP+ MPT+I R +P D
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARD 63
Query: 354 RFQMRIHKRVIDLHSPSE-IVKQITSINIEPGVEVEVTI 467
++++R +KR+ID+ P++ V + +++ GV+V++ +
Sbjct: 64 QYEIRTYKRLIDIVQPTDKTVDALMKLDLAAGVDVQIAL 102
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 53.6 bits (123), Expect = 3e-06
Identities = 27/99 (27%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+IRI L + R L++ ++ AK+ + GP+ +PT+ T ++P + + +
Sbjct: 5 KIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSRE 63
Query: 354 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 467
+F+MR HKR+ID+ +P+ + V + +++ GV++E+ +
Sbjct: 64 QFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSGVDIEIKL 102
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+IRI L + + R L+ C +I A + GP+ +PTK ++P + +
Sbjct: 9 KIRIRLKAFDRRMLDLSCDKIIETADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-E 67
Query: 354 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 467
F+ R H+R+ID++SPS + + + +++ GV++EV +
Sbjct: 68 HFETRTHRRIIDIYSPSAKTIDALMKLDLPSGVDIEVKL 106
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+IRI L + + R L++ ++ AK+ V GP+ +PT+ I T + + +
Sbjct: 5 KIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSRE 63
Query: 354 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 467
+F+MR HKR+ID+ +P+ + V + +++ GV++E+ +
Sbjct: 64 QFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL 102
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 51.2 bits (117), Expect = 1e-05
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
++RI L+S + L C +++ K+ VKGPV +PT+ ++P + +
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLRSP-HVNKDSRE 70
Query: 354 RFQMRIHKRVIDLHS-PSEIVKQITSINIEPGVEVEV 461
F++R H R+ID+ S SE ++ + +++ GV +E+
Sbjct: 71 HFEIRSHFRIIDISSCSSETIEMLMRLDLPTGVNIEI 107
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 49.2 bits (112), Expect = 6e-05
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
++ I + S + + KVC + K ++ +P K+ ITT + P G+G+K W
Sbjct: 20 KVCIDMASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWS 79
Query: 354 RFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEVTI 467
R++M +H R L + ++ K + + P VE+ ++I
Sbjct: 80 RYKMIVHLRNFYLEATHQQLEKVVQFLRNFPHVEINLSI 118
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 47.6 bits (108), Expect = 2e-04
Identities = 28/100 (28%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +3
Query: 171 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 350
+ ++I L S + R L++ +I ++ +VKGP+ +PTK T ++P +
Sbjct: 3 NEMKIKLFSYDHRLLDQSVRKIIKSSQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSR 61
Query: 351 DRFQMRIHKRVIDLHSPSEIVKQ-ITSINIEPGVEVEVTI 467
++F+ R H+R+I L + +E K+ + +I I GV++++T+
Sbjct: 62 EQFERRTHQRLIILLNTTEKTKEYLKNIIIPSGVDIQITL 101
>UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2;
Wolbachia|Rep: 30S ribosomal protein S10 - Wolbachia
pipientis wMel
Length = 109
Score = 46.4 bits (105), Expect = 4e-04
Identities = 25/100 (25%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +3
Query: 177 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 356
I I + + + LE+ I+ K+ ++ GP+ +P K + ++P + K+ ++
Sbjct: 5 IYINIKAFDCSLLEECVRKFIDELKRSSAKLSGPIALPRKDSKFIVNRSPHVD-KKSREQ 63
Query: 357 FQMRIHKRVIDLHSPSEIVKQ-ITSINIEPGVEVEVTIAD 473
F+MR +R+I LH + + Q +T ++ GVEV++ + +
Sbjct: 64 FEMRTSRRLIVLHDLTPTMMQMLTGLSFSAGVEVDLKVKE 103
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 46.4 bits (105), Expect = 4e-04
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+IRI L S + ++K ++ K V GP+ +PT RI T K+ +
Sbjct: 4 KIRIKLKSYDHNLVDKSAEKIVRTVKATGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSRE 62
Query: 354 RFQMRIHKRVIDLH-SPSEIVKQITSINIEPGVEVEVTI 467
+F++ +KR+ID++ S ++ V + + + GVEVE+ +
Sbjct: 63 QFELSSYKRLIDIYSSTAKTVDALMKLELPSGVEVEIKV 101
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 41.1 bits (92), Expect = 0.015
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 168 IHRIRITLTSRNVRSLEKVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 344
I + + L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P + K
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KK 61
Query: 345 TWDRFQMRIHKRVIDLHS 398
+ ++F++R + + I + S
Sbjct: 62 SREQFEIRTYTKTIQIES 79
>UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5;
Bacteria|Rep: 30S ribosomal protein S10 - Onion yellows
phytoplasma
Length = 107
Score = 39.9 bits (89), Expect = 0.034
Identities = 20/94 (21%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +3
Query: 177 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 356
I+I L + + +++ +I+ K ++GP+ +PT+ T ++P + ++
Sbjct: 9 IKIILRAYDHHLIDQSAKKIIDILTKTGANIEGPIPLPTRKEVFTVLRSPF-VNKDSREQ 67
Query: 357 FQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEV 455
F+ R HKR+I + +P+ + ++ + I++ P +++
Sbjct: 68 FERRTHKRLIQIINPNKKTIESLMHISLPPAIDI 101
>UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10;
n=3; Bacillariophyta|Rep: Chloroplast 30S ribosomal
protein S10 - Phaeodactylum tricornutum
Length = 107
Score = 37.9 bits (84), Expect = 0.14
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 353
+IR+ L S N L C ++N + G + +PT+ ++P + +
Sbjct: 8 KIRVRLESFNHELLNSSCQKIVNILQNTLSNSIGVITLPTRKRIYCVLRSPHVDKDSR-E 66
Query: 354 RFQMRIHKRVIDLHSPSE--IVKQITSINIEPGVEVEVTIA 470
F++R HKR+++++ SE I ++ ++ PGV + ++
Sbjct: 67 HFEIRTHKRILEIYYNSEVPIFDLLSEADLPPGVFYRICLS 107
>UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7;
Mollicutes|Rep: 30S ribosomal protein S10 - Mycoplasma
pulmonis
Length = 103
Score = 37.5 bits (83), Expect = 0.18
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 246 AKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQI 422
A K+K+ GP+ +PTK I T K+ ++F+ R +KR I ++P + V+ +
Sbjct: 29 ASKEKIDYSGPIPLPTK-REIFTILRSVHVNKKSREQFERRTYKRFIVFNNPGPKFVEIL 87
Query: 423 TSINIEPGVEVEVTI 467
+ GVEVE +
Sbjct: 88 KRTEMPAGVEVEFKV 102
>UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S10 -
Mycoplasma hyopneumoniae (strain 232)
Length = 106
Score = 36.7 bits (81), Expect = 0.31
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Frame = +3
Query: 177 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 356
I+I L S + R ++ +I A++ + +GPV +PT I T K+ ++
Sbjct: 6 IKIKLKSFDHRQIDAAAKKIILLARELNIETRGPVPLPTS-RAIYTILRSVHINKKSREQ 64
Query: 357 FQMRIHKRVIDLH----SPSEIVKQITSINIEPGVEVEVTIA 470
F+ R HKR++ L + + ++I+ + GV +E+ ++
Sbjct: 65 FESRTHKRLVILKVLPTNQKLVTEKISRSQLPAGVWIEIEVS 106
>UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2;
Halobacteriaceae|Rep: Ribosomal protein S10p -
Haloarcula marismortui (Halobacterium marismortui)
Length = 138
Score = 35.1 bits (77), Expect = 0.96
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = +3
Query: 183 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 362
+T TS + LE ++ A+++ + +KGP + LRI K+ +G + +D +
Sbjct: 35 LTFTSGDRHRLEDTVTEIKQSAEQKGVELKGPHPKQPQELRIPQSKSLGPDGGR-FDSWT 93
Query: 363 MRIHKRVIDLHSPSEIVKQIT------SINIEPGVE 452
++ R I++ E + +T +I++E GVE
Sbjct: 94 HTVYTRTIEIVGYEEFARDVTQRTFPNAIHVEAGVE 129
>UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: FliF
protein - Bradyrhizobium japonicum
Length = 519
Score = 34.3 bits (75), Expect = 1.7
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +3
Query: 141 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 320
E P+ S + R+R L ++ +R++ + A +NG K Q++ + T +
Sbjct: 142 EAPEPSASIVVRVRGALEAQQIRAIRHLVASAVNGLKPQRVSIVDEAGQLLADGAATDPE 201
Query: 321 TPCGEGSKTWDRFQMRIHKRVIDLHS 398
G+ +T F+ R+ K+V D+ S
Sbjct: 202 QALGDERRT--TFEKRMRKQVEDIVS 225
>UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
pneumoniae
Length = 108
Score = 33.5 bits (73), Expect = 2.9
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +3
Query: 177 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 356
++I L S + L+ ++ K +++KGP+ +PTK IT ++P + + ++
Sbjct: 12 LKIKLESYDSTLLDLTTKKIVEVVKGVDVKIKGPLPLPTKKEVITIIRSPHVDKASR-EQ 70
Query: 357 FQMRIHKRVIDLHSPSE-IVKQITSINIEPGV 449
F+ HKR++ L ++ + + I I GV
Sbjct: 71 FEKNRHKRLMILVDVNQGAIDSLKRIKIPVGV 102
>UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2;
Burkholderia ambifaria|Rep: Putative uncharacterized
protein - Burkholderia ambifaria MC40-6
Length = 325
Score = 33.1 bits (72), Expect = 3.9
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 73 KLFISAGIQQATWQPL*CQAKTSRNPRQRSPLFTASGSLLLLAMCAHSRRSV 228
+ FI+AGI TWQPL T+R P + F+ G+L LLA A R S+
Sbjct: 231 RTFIAAGIHPETWQPL----ATARRPAMIA--FSIIGALGLLAFWAWGRMSL 276
>UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
SSU ribosomal protein S10P - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 78
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +3
Query: 285 MPTKILRITT-RKTPCGEGSKTWDRFQMRIHKRVIDL-HSPSEIVKQITSINI 437
+PT+I + T R + S+ ++F+MR+H+R+I+L +S + + +TS+++
Sbjct: 3 LPTRIRKYTVLRSLHVNKDSR--EQFEMRVHRRMIELVNSTDKAISSLTSVHL 53
>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 226
Score = 31.9 bits (69), Expect = 8.9
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 282 RMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRV 383
R+P ++ + +TPC S W+R ++R+H RV
Sbjct: 8 RLPLRVY-VDEAETPCWRASADWERGELRLHYRV 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,710,825
Number of Sequences: 1657284
Number of extensions: 10807149
Number of successful extensions: 26319
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 25726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26297
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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