Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c02
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.6  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -1

Query: 644 IAMKSVIFVGFEIFNILLI-----FNNKHATFFVASHHNTVFTNGNVFV 513
           I+M  +IFV  EI++I  +     F N   T+ V+   N V    ++F+
Sbjct: 10  ISMAFIIFVSLEIYHIYTVVEESGFENFVKTYLVSDFENYVTFFCSLFI 58


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 264 KKICILLNLNFKHVIESSFDKNHIVAKLC 350
           K +C + N  F    E  F   HI  +LC
Sbjct: 638 KVVCYMTNWAFYRKAEGKFVPEHIDQRLC 666


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 576 FIVKNEQNIEYLKANKYYAFHSDSVDNFEFEND 674
           +I ++  +  Y  ANK Y FH     N  FEND
Sbjct: 560 YIDESSNSSNYF-ANKTYDFH-----NMSFEND 586


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 252 NYYLKKICILLNLNFKHVI 308
           N Y+K++C L N ++K+ +
Sbjct: 199 NQYIKQVCKLNNGHYKNFL 217


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 252 NYYLKKICILLNLNFKHVI 308
           N Y+K++C L N ++K+ +
Sbjct: 24  NQYIKQVCKLNNGHYKNFL 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,597
Number of Sequences: 336
Number of extensions: 2898
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)