Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c02
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            27   0.77 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   5.4  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   7.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.5  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 564  KSRVFIVKNE-QNIEYLKANKYYAFHSDSVDNFEFENDSKKCFKI*FN 704
            + R+  +  E +   ++  +K+Y+ +S S++NF F   +++ F + FN
Sbjct: 3257 RERIAALSEELEESRHILQHKFYSNNSQSLNNFTFGLHTQEIFPLQFN 3304


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 161  KTKKARMRQSHRQH 202
            + + AR+RQ HRQH
Sbjct: 1091 RARMARLRQRHRQH 1104


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 18  IFYAPYTHRVDIINMDQFEQLINVSLLKSLIK 113
           IF+  Y  +  IIN D ++ L+    +KS  K
Sbjct: 83  IFFIEYLQKGKIINSDYYKALLERLKVKSAAK 114


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 543 VMVRRDEKSRVFIVKNEQNIEYLKANKYY--AFHSD 644
           V V++   + VF+ KN   + Y  +NK Y   FH D
Sbjct: 24  VEVKKIANNTVFVRKNRALLIYQLSNKDYTEVFHED 59


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 677  AIVFKLKIINAIAMKSVIFVGFEIFNILLIFNNKHATF-FVASHHNTVF 534
            AIVF++       M  ++F+GF +  + L    +  TF  V  + N +F
Sbjct: 1614 AIVFEIVTNKKFDMIIMLFIGFNMLTMTLDHYKQSETFSAVLDYLNMIF 1662


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +3

Query: 45  VDIINMDQFEQLINVS----LLKSLIKTQIDENVSDNIKSMSEKLKRLECDN 188
           +D +  D F  LI+ S    ++    + ++     DN+K +   +  +EC+N
Sbjct: 296 LDTLGDDDFFNLISFSDQSRVIVPCFQDKMVRATPDNVKEVKTAINAVECEN 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,827
Number of Sequences: 2352
Number of extensions: 11167
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)