Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c01
         (254 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    23   1.3  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    22   3.1  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    21   9.5  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    21   9.5  

>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP10 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 253 FFFKIKSLE*NPDKKGIPHKDKFEIFKHK 167
           FF K++ +    D+KG+  KDK E+F  K
Sbjct: 67  FFQKLRLM----DEKGVVLKDKLEVFLTK 91


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 9   RLGFPDIAFFHLLTHA 56
           R G+ DI   HLL+HA
Sbjct: 126 RFGYRDILDTHLLSHA 141


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 190 YLCVVFLFYLDFILKI 237
           ++ VVFL +L FIL++
Sbjct: 314 WIRVVFLIWLPFILRM 329


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = +2

Query: 200 WYSFFIWIL 226
           W+S F+W++
Sbjct: 388 WFSMFLWLI 396


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,208
Number of Sequences: 2352
Number of extensions: 1555
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 13619013
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)