Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10b23
         (582 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    56   2e-10
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    50   2e-08
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    50   2e-08
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    49   4e-08
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    38   7e-05
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                37   1e-04
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    36   2e-04
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    25   0.54 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   3.8  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 56.4 bits (130), Expect = 2e-10
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
 Frame = +1

Query: 19  DLFETLQIKGELSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDY 198
           +L+  L+ KG             + EA + LH  N I+ D+K EN+L  ++   V + D+
Sbjct: 452 ELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLL-LDSQGYVKLVDF 510

Query: 199 GLCK---HENLPSVHDGTLEYFSPEKIRRHNYARSFDWYAVGVLTYKLLTG 342
           G  K   H        GT EY +PE I    +  S D++++GVL ++LLTG
Sbjct: 511 GFAKRLDHGRKTWTFCGTPEYVAPEVILNKGHDISADYWSLGVLMFELLTG 561


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
            isoform B protein.
          Length = 931

 Score = 50.0 bits (114), Expect = 2e-08
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
 Frame = +1

Query: 76   IIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKHE--NLPSVHDGTLE 249
            I   + E +  LH    +H D+KL+NVL  +  +R  + D+G C  E   L S+  GT  
Sbjct: 702  IALDVLEGIRYLHSQGLVHRDVKLKNVL-LDIENRAKLTDFGFCITEVMMLGSI-VGTPV 759

Query: 250  YFSPEKIRRHNYARSFDWYAVGVLTYKLLTGG-RHP--FEKSEDEMLDLNSMKR 402
            + +PE +  H Y  S D YA G+L + L  G  R P  FE+  ++ L   S+K+
Sbjct: 760  HMAPELLSGH-YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKK 812


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 50.0 bits (114), Expect = 2e-08
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
 Frame = +1

Query: 76   IIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKHE--NLPSVHDGTLE 249
            I   + E +  LH    +H D+KL+NVL  +  +R  + D+G C  E   L S+  GT  
Sbjct: 740  IALDVLEGIRYLHSQGLVHRDVKLKNVL-LDIENRAKLTDFGFCITEVMMLGSI-VGTPV 797

Query: 250  YFSPEKIRRHNYARSFDWYAVGVLTYKLLTGG-RHP--FEKSEDEMLDLNSMKR 402
            + +PE +  H Y  S D YA G+L + L  G  R P  FE+  ++ L   S+K+
Sbjct: 798  HMAPELLSGH-YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKK 850


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 48.8 bits (111), Expect = 4e-08
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
 Frame = +1

Query: 70  SNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALD--RVYVCDYGLCKHENLPSV---- 231
           S+ I+Q+ E+++  H +  +H D+K EN+L         V + D+GL       +     
Sbjct: 12  SHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFG 71

Query: 232 HDGTLEYFSPEKIRRHNYARSFDWYAVGVLTYKLLTG 342
             GT  Y SPE +++  Y +  D +A GV+ Y LL G
Sbjct: 72  FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVG 108


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 37.9 bits (84), Expect = 7e-05
 Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
 Frame = +1

Query: 61   QLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKH-----ENLP 225
            QLV  ++R +   +  L + N++H D+   NVL   AL    + D+GL +      E   
Sbjct: 736  QLVG-MLRGIASGMQYLAEMNYVHRDLAARNVLVNAAL-VCKIADFGLSREIESATEGAY 793

Query: 226  SVHDGTL--EYFSPEKIRRHNYARSFDWYAVGVLTYKLLTGGRHPF 357
            +   G +   + +PE I    +  + D +++G++ +++++ G  P+
Sbjct: 794  TTRGGKIPVRWTAPEAIAFRKFTSASDVWSMGIVCWEVMSYGERPY 839


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
 Frame = +1

Query: 76  IIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKHENLPSVHD---GTL 246
           I++ +  AL   H    +H D+K +N+L      +  + D+G       P+  D   GT 
Sbjct: 160 ILKSITCALQFCHNAGIVHADVKPKNIL-MSKNGQPKLTDFGSSVLIGAPNEIDKFYGTP 218

Query: 247 EYFSPEKIRRHNYARSFDWYAVGVLTYKLL 336
            Y +PE I+++    + D Y++G++ +++L
Sbjct: 219 GYTAPEVIKQNRPTPAADIYSLGIVAWQML 248


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 18/69 (26%), Positives = 34/69 (49%)
 Frame = +1

Query: 4   YIDCPDLFETLQIKGELSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRV 183
           Y++  DL   +Q  G+    +      ++   L  LH    ++ D+KL+NVL  +    +
Sbjct: 66  YVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVL-LDQDGHI 124

Query: 184 YVCDYGLCK 210
            + D+G+CK
Sbjct: 125 KIADFGMCK 133


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 21/84 (25%), Positives = 33/84 (39%)
 Frame = +1

Query: 262 EKIRRHNYARSFDWYAVGVLTYKLLTGGRHPFEKSEDEMLDLNSMKRRQQYNDIGVLKHV 441
           E+  R  Y+RS +       +YK     R   E S++   D    +R ++   I  L + 
Sbjct: 265 ERTSRKRYSRSREREQK---SYKNENSYRKYRETSKERSRDRTERERSKERKIISSLSNN 321

Query: 442 RNVNARDFVYCLTRYNLDCRLTNY 513
            N N  ++ Y    YN      NY
Sbjct: 322 YNYNNNNYKYNYNNYNKKLYYKNY 345


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = -2

Query: 314 PTAYQSNERA*LWRRI--FSGLKYSNVPSCTLGKFS 213
           P+ Y    R  L   +  F   KYSNVP    G F+
Sbjct: 195 PSVYSKTRRRALEHTLDRFHNDKYSNVPYFLFGDFN 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,263
Number of Sequences: 438
Number of extensions: 2782
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)