Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10b17
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   3.2  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   5.7  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.9  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 709 NFLIGVLCIFKMCVVRHFYC 650
           NFL  VL  F +C+ + +YC
Sbjct: 236 NFLF-VLSTFSICITQFYYC 254


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 691 LCIFKMCVVRHFYCKPLTLIIYLLN*IKTIQ 599
           +C+  +    HFY    T+  Y+LN   +IQ
Sbjct: 101 ICVSNVFDFVHFYYPVATMSFYVLNFFGSIQ 131


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 216 QKEGLSCNLFRYVGLVSQYWWKQLPLRF 299
           QK+G    + +++    Q WWKQL  ++
Sbjct: 81  QKQGAK-TVIQHLYKNKQDWWKQLEAKY 107


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 592 MKLVLFLFSLTNILLRLRVCNRN 660
           + L + +FS  +ILL +R   RN
Sbjct: 230 LPLAVIIFSYASILLEIRRRTRN 252


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 592 MKLVLFLFSLTNILLRLRVCNRN 660
           + L + +FS  +ILL +R   RN
Sbjct: 230 LPLAVIIFSYASILLEIRRRTRN 252


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 277 GNNYHCVLPGGRYPSSN 327
           GNN H + P   YP  N
Sbjct: 233 GNNIHGMAPSVMYPHLN 249


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 277 GNNYHCVLPGGRYPSSN 327
           GNN H + P   YP  N
Sbjct: 181 GNNIHGMAPSVMYPHLN 197


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 277 GNNYHCVLPGGRYPSSN 327
           GNN H + P   YP  N
Sbjct: 364 GNNIHGMAPSVMYPHLN 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,979
Number of Sequences: 336
Number of extensions: 3630
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)